RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 ANAPC15P60006 121 aa7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 PDE4BQ07343 736 aa7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 PPARAQ07869 468 aa7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 ALX1Q15699 326 aa7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 NBPF9Q3BBW0 867 aa7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 C6orf132Q5T0Z8 1188 aa7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 ANGEL2Q5VTE6 544 aaKnown RBP7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 CREB3L3Q68CJ9 461 aa7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 USP50Q70EL3 339 aaPredicted RBP7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 PNMA8AQ86V59 439 aaPredicted RBP7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 SULF1Q8IWU6 871 aa7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 ZNF526Q8TF50 670 aaPredicted RBP7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 DCPSQ96C86 337 aaKnown RBP7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 HOOK2Q96ED9 719 aa7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 PRMT6Q96LA8 375 aaPredicted RBP7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 CSRNP1Q96S65 589 aa7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 IDI2Q9BXS1 227 aa7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 ADAM33Q9BZ11 813 aa7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 CNNM2Q9H8M5 875 aa7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 PCDHAC2Q9Y5I4 1007 aa7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 CCDC88AQ3V6T2 1871 aa7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 ROBO3Q96MS0 1386 aa7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 PITPNM2Q9BZ72 1349 aa7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 NAV1Q8NEY1 1877 aa7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 USP17L12C9JPN9 530 aa7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 USP17L21D6R901 530 aa7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 CYP21A2P08686 494 aa7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 HMGB1P09429 215 aaKnown RBP7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 PCP11498 1178 aaKnown RBP7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 ANP32AP39687 249 aaKnown RBP7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 RBM25P49756 843 aaKnown RBP7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 FGD1P98174 961 aa7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 NFIAQ12857 509 aa7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 HIC1Q14526 733 aa7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 RRP12Q5JTH9 1297 aaKnown RBP7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 PPP4R3BQ5MIZ7 849 aa7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 FKBP1CQ5VVH2 108 aa7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 CTR9Q6PD62 1173 aa7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 MFSD6Q6ZSS7 791 aa7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 FAM83AQ86UY5 434 aa7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 STK11IPQ8N1F8 1099 aa7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 ZBED3Q96IU2 234 aaPredicted RBP7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 JAKMIP1Q96N16 626 aaKnown RBP7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 KRT23Q9C075 422 aa7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 DDX4Q9NQI0 724 aaKnown RBP7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 PPP2R3BQ9Y5P8 575 aa7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 DICER1Q9UPY3 1922 aaKnown RBP7.79□□□□□ -1.16
CTDNEP1-204ENST00000570484 WDR90Q96KV7 1748 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 FOXP2O15409 715 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 EGFRP00533 1210 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 VEGFAP15692 232 aaPredicted RBP7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 CASTP20810 708 aaKnown RBP7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 NF2P35240 595 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 CTDSPL2Q05D32 466 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 SART3Q15020 963 aaKnown RBP7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 NECTIN1Q15223 517 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 RABEP1Q15276 862 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 TSR1Q2NL82 804 aaKnown RBP7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 SBK1Q52WX2 424 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 AKNAD1Q5T1N1 836 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 BLOC1S2Q6QNY1 142 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 TBC1D10CQ8IV04 446 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 NCOA7Q8NI08 942 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 FAM151AQ8WW52 585 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 ESR2Q92731 530 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 TAF1DQ9H5J8 278 aaPredicted RBP7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 MKNK2Q9HBH9 465 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 FAM198AQ9UFP1 575 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 SWAP70Q9UH65 585 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 SERPINB13Q9UIV8 391 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 PALD1Q9ULE6 856 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 SNX14Q9Y5W7 946 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 ATRNL1Q5VV63 1379 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 DDX60LQ5H9U9 1706 aaKnown RBP7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 NEDD4P46934 1319 aa7.78□□□□□ -1.16
CTDNEP1-204ENST00000570484 GOLGB1Q14789 3259 aaKnown RBP7.77□□□□□ -1.16
CTDNEP1-204ENST00000570484 LAMB1P07942 1786 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 CYP2D7A0A087X1C5 515 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 ERICH2A1L162 156 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 TSPY2A6NKD2 308 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 E7EWF7 191 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 MAP3K7O43318 606 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 CYP2D6P10635 497 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 NT5C2P49902 561 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 RASA3Q14644 834 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 C12orf60Q5U649 245 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 DCAF15Q66K64 600 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 KRT26Q7Z3Y9 468 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 TTC13Q8NBP0 860 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 STAG1Q8WVM7 1258 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 NEK1Q96PY6 1258 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 UBAC1Q9BSL1 405 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 TMEM39BQ9GZU3 492 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 DEFB129Q9H1M3 183 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 EHD4Q9H223 541 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 CDHR5Q9HBB8 845 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 GPBP1L1Q9HC44 474 aaPredicted RBP7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 PI4KBQ9UBF8 816 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 HERC5Q9UII4 1024 aaKnown RBP7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 ANAPC4Q9UJX5 808 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms