RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ZNFX1Q9P2E3 1918 aaKnown RBP8.52□□□□□ -1.04
HERPUD1-217ENST00000569429 KMT2EQ8IZD2 1858 aa8.52□□□□□ -1.05
HERPUD1-217ENST00000569429 CTNND1O60716 968 aaKnown RBP8.52□□□□□ -1.05
HERPUD1-217ENST00000569429 TIMP1P01033 207 aa8.52□□□□□ -1.05
HERPUD1-217ENST00000569429 SLC5A1P13866 664 aa8.52□□□□□ -1.05
HERPUD1-217ENST00000569429 MAP3K10Q02779 954 aa8.52□□□□□ -1.05
HERPUD1-217ENST00000569429 MAP2K5Q13163 448 aa8.52□□□□□ -1.05
HERPUD1-217ENST00000569429 PPIGQ13427 754 aaKnown RBP eCLIP8.52□□□□□ -1.051e-7■■□□□ 13.6
HERPUD1-217ENST00000569429 MFSD5Q6N075 450 aa8.52□□□□□ -1.05
HERPUD1-217ENST00000569429 HHIPL2Q6UWX4 724 aa8.52□□□□□ -1.05
HERPUD1-217ENST00000569429 GPR142Q7Z601 462 aa8.52□□□□□ -1.05
HERPUD1-217ENST00000569429 TBC1D22AQ8WUA7 517 aa8.52□□□□□ -1.05
HERPUD1-217ENST00000569429 TOX2Q96NM4 488 aa8.52□□□□□ -1.05
HERPUD1-217ENST00000569429 METTL22Q9BUU2 404 aaPredicted RBP8.52□□□□□ -1.05
HERPUD1-217ENST00000569429 PLA2G12BQ9BX93 195 aa8.52□□□□□ -1.05
HERPUD1-217ENST00000569429 FLRT1Q9NZU1 646 aa8.52□□□□□ -1.05
HERPUD1-217ENST00000569429 MYH13Q9UKX3 1938 aa8.52□□□□□ -1.05
HERPUD1-217ENST00000569429 IGHA2P01877 340 aa8.51□□□□□ -1.05
HERPUD1-217ENST00000569429 CSF1RP07333 972 aa8.51□□□□□ -1.05
HERPUD1-217ENST00000569429 HSPA5P11021 654 aaKnown RBP8.51□□□□□ -1.05
HERPUD1-217ENST00000569429 CYBAP13498 195 aa8.51□□□□□ -1.05
HERPUD1-217ENST00000569429 HIBADHP31937 336 aaKnown RBP8.51□□□□□ -1.05
HERPUD1-217ENST00000569429 SSTR3P32745 418 aaPredicted RBP8.51□□□□□ -1.05
HERPUD1-217ENST00000569429 ID4P47928 161 aa8.51□□□□□ -1.05
HERPUD1-217ENST00000569429 TCP10Q12799 353 aa8.51□□□□□ -1.05
HERPUD1-217ENST00000569429 PPP2R2DQ66LE6 453 aa8.51□□□□□ -1.05
HERPUD1-217ENST00000569429 PSRC1Q6PGN9 363 aaPredicted RBP8.51□□□□□ -1.05
HERPUD1-217ENST00000569429 PLEKHH3Q7Z736 793 aa8.51□□□□□ -1.05
HERPUD1-217ENST00000569429 TRPV1Q8NER1 839 aa8.51□□□□□ -1.05
HERPUD1-217ENST00000569429 FERMT2Q96AC1 680 aa8.51□□□□□ -1.05
HERPUD1-217ENST00000569429 EDC3Q96F86 508 aaKnown RBP8.51□□□□□ -1.05
HERPUD1-217ENST00000569429 TXNRD2Q9NNW7 524 aa8.51□□□□□ -1.05
HERPUD1-217ENST00000569429 GAKO14976 1311 aa8.51□□□□□ -1.05
HERPUD1-217ENST00000569429 MAST3O60307 1309 aa8.51□□□□□ -1.05
HERPUD1-217ENST00000569429 SLC4A2P04920 1241 aa8.5□□□□□ -1.05
HERPUD1-217ENST00000569429 HOXC6P09630 235 aa8.5□□□□□ -1.05
HERPUD1-217ENST00000569429 FAAP100Q0VG06 881 aa8.5□□□□□ -1.05
HERPUD1-217ENST00000569429 TCF15Q12870 199 aa8.5□□□□□ -1.05
HERPUD1-217ENST00000569429 LRRC41Q15345 812 aa8.5□□□□□ -1.05
HERPUD1-217ENST00000569429 ZNF365Q70YC5 407 aa8.5□□□□□ -1.05
HERPUD1-217ENST00000569429 ANKRD33Q7Z3H0 272 aa8.5□□□□□ -1.05
HERPUD1-217ENST00000569429 FAM84BQ96KN1 310 aaPredicted RBP8.5□□□□□ -1.05
HERPUD1-217ENST00000569429 TBC1D2Q9BYX2 928 aa8.5□□□□□ -1.05
HERPUD1-217ENST00000569429 PORCNQ9H237 461 aa8.5□□□□□ -1.05
HERPUD1-217ENST00000569429 PHAXQ9H814 394 aaKnown RBP8.5□□□□□ -1.05
HERPUD1-217ENST00000569429 PHF24Q9UPV7 400 aa8.5□□□□□ -1.05
HERPUD1-217ENST00000569429 SUGT1Q9Y2Z0 365 aa8.5□□□□□ -1.05
HERPUD1-217ENST00000569429 LRRFIP2Q9Y608 721 aaKnown RBP8.5□□□□□ -1.05
HERPUD1-217ENST00000569429 MYO7AQ13402 2215 aa8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 MYH2Q9UKX2 1941 aa8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 H7C1W4 665 aa8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 CHL1O00533 1208 aa8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 PQBP1O60828 265 aaKnown RBP8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 HOXA7P31268 230 aaPredicted RBP8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 ERVK-9P63128 1117 aa8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 ERVK-24P63145 666 aa8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 ATP2B2Q01814 1243 aa8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 NFIAQ12857 509 aa8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 SPP2Q13103 211 aa8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 Q3C1V9 767 aa8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 SH3D19Q5HYK7 790 aa8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 IER5LQ5T953 404 aa8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 BMP8AQ7Z5Y6 402 aa8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 CCAR1Q8IX12 1150 aaKnown RBP8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 IRF2BPLQ9H1B7 796 aa8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 MTIF3Q9H2K0 278 aaKnown RBP8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 RBPJLQ9UBG7 517 aa8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 FAM198AQ9UFP1 575 aa8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 TBX21Q9UL17 535 aa8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 PCDHA11Q9Y5I1 949 aa8.49□□□□□ -1.05
HERPUD1-217ENST00000569429 USP24Q9UPU5 2620 aa8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 ANKRD18BA2A2Z9 1011 aa8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 DCDC2CA8MYV0 355 aa8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 PROB1E7EW31 1015 aa8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 RFXAPO00287 272 aa8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 SEPT4O43236 478 aa8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 PEX10O60683 326 aa8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 GLRX3O76003 335 aaKnown RBP8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 IGKV5-2P06315 115 aa8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 CSF2RAP15509 400 aa8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 CYP2C19P33261 490 aa8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 GYG1P46976 350 aa8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 HMGCS2P54868 508 aa8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 HERVK_113P62684 666 aa8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 IRX3P78415 501 aaPredicted RBP8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 UBE4AQ14139 1066 aa8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 PKN1Q16512 942 aa8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 LEXMQ3ZCV2 418 aa8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 EPHA10Q5JZY3 1008 aa8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 KRT40Q6A162 431 aa8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 CDC42EP5Q6NZY7 148 aa8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 SAMD1Q6SPF0 538 aaPredicted RBP8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 CCDC84Q86UT8 332 aaPredicted RBP8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 TMEM199Q8N511 208 aa8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 ZNF280CQ8ND82 737 aa8.48□□□□□ -1.05
HERPUD1-217ENST00000569429 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.48□□□□□ -1.054e-7■□□□□ 11
HERPUD1-217ENST00000569429 SETXQ7Z333 2677 aaKnown RBP8.47□□□□□ -1.05
HERPUD1-217ENST00000569429 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.47□□□□□ -1.05
HERPUD1-217ENST00000569429 MED19A0JLT2 244 aaPredicted RBP8.47□□□□□ -1.05
HERPUD1-217ENST00000569429 MYCNP04198 464 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms