RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 LRRC26Q2I0M4 334 aa18.31■□□□□ 0.52
USB1-214ENST00000568848 MAP3K21Q5TCX8 1036 aa18.31■□□□□ 0.52
USB1-214ENST00000568848 CLUAP1Q96AJ1 413 aa18.31■□□□□ 0.52
USB1-214ENST00000568848 DBNDD2Q9BQY9 259 aa18.31■□□□□ 0.52
USB1-214ENST00000568848 OGDHLQ9ULD0 1010 aa18.31■□□□□ 0.52
USB1-214ENST00000568848 COL2A1P02458 1487 aaPredicted RBP18.31■□□□□ 0.52
USB1-214ENST00000568848 ZBTB22O15209 634 aa18.3■□□□□ 0.52
USB1-214ENST00000568848 NPM3O75607 178 aaKnown RBP18.3■□□□□ 0.52
USB1-214ENST00000568848 GSTO1P78417 241 aa18.3■□□□□ 0.52
USB1-214ENST00000568848 UBE2OQ9C0C9 1292 aaKnown RBP18.3■□□□□ 0.52
USB1-214ENST00000568848 C1orf115Q9H7X2 142 aa18.3■□□□□ 0.52
USB1-214ENST00000568848 PIH1D3Q9NQM4 214 aaKnown RBP18.3■□□□□ 0.52
USB1-214ENST00000568848 TMOD4Q9NZQ9 345 aa18.3■□□□□ 0.52
USB1-214ENST00000568848 FLRT1Q9NZU1 646 aa18.3■□□□□ 0.52
USB1-214ENST00000568848 EYSQ5T1H1 3165 aa18.3■□□□□ 0.52
USB1-214ENST00000568848 FRMPD3Q5JV73 1810 aa18.3■□□□□ 0.52
USB1-214ENST00000568848 FOCADQ5VW36 1801 aa18.3■□□□□ 0.52
USB1-214ENST00000568848 LDHCP07864 332 aa18.29■□□□□ 0.52
USB1-214ENST00000568848 BMP8BP34820 402 aa18.29■□□□□ 0.52
USB1-214ENST00000568848 EVX2Q03828 476 aa18.29■□□□□ 0.52
USB1-214ENST00000568848 PABPC4Q13310 644 aaKnown RBP eCLIP18.29■□□□□ 0.52
USB1-214ENST00000568848 MTX1Q13505 466 aa18.29■□□□□ 0.52
USB1-214ENST00000568848 NAA16Q6N069 864 aaPredicted RBP18.29■□□□□ 0.52
USB1-214ENST00000568848 ANKLE1Q8NAG6 615 aa18.29■□□□□ 0.52
USB1-214ENST00000568848 FAM161BQ96MY7 647 aa18.29■□□□□ 0.52
USB1-214ENST00000568848 AS3MTQ9HBK9 375 aa18.29■□□□□ 0.52
USB1-214ENST00000568848 EMILIN3Q9NT22 766 aa18.29■□□□□ 0.52
USB1-214ENST00000568848 TLR7Q9NYK1 1049 aaKnown RBP18.29■□□□□ 0.52
USB1-214ENST00000568848 ZBTB21Q9ULJ3 1066 aa18.29■□□□□ 0.52
USB1-214ENST00000568848 VCANP13611 3396 aa18.29■□□□□ 0.52
USB1-214ENST00000568848 BCAR3O75815 825 aa18.28■□□□□ 0.52
USB1-214ENST00000568848 CNMDO75829 334 aa18.28■□□□□ 0.52
USB1-214ENST00000568848 CYP2E1P05181 493 aaPredicted RBP18.28■□□□□ 0.52
USB1-214ENST00000568848 ZKSCAN1P17029 563 aaPredicted RBP18.28■□□□□ 0.52
USB1-214ENST00000568848 LHX8Q68G74 356 aa18.28■□□□□ 0.52
USB1-214ENST00000568848 GPR142Q7Z601 462 aa18.28■□□□□ 0.52
USB1-214ENST00000568848 TDHQ8IZJ6 230 aa18.28■□□□□ 0.52
USB1-214ENST00000568848 GPRC5AQ8NFJ5 357 aa18.28■□□□□ 0.52
USB1-214ENST00000568848 NUDT12Q9BQG2 462 aa18.28■□□□□ 0.52
USB1-214ENST00000568848 WDR18Q9BV38 432 aa18.28■□□□□ 0.52
USB1-214ENST00000568848 PI4KBQ9UBF8 816 aa18.28■□□□□ 0.52
USB1-214ENST00000568848 HERC5Q9UII4 1024 aaKnown RBP18.28■□□□□ 0.52
USB1-214ENST00000568848 COL6A1P12109 1028 aa18.27■□□□□ 0.52
USB1-214ENST00000568848 TRIM27P14373 513 aa18.27■□□□□ 0.52
USB1-214ENST00000568848 ZAP70P43403 619 aa18.27■□□□□ 0.52
USB1-214ENST00000568848 ERVK-9P63128 1117 aa18.27■□□□□ 0.52
USB1-214ENST00000568848 ERVK-24P63145 666 aa18.27■□□□□ 0.52
USB1-214ENST00000568848 TTC39AQ5SRH9 613 aa18.27■□□□□ 0.52
USB1-214ENST00000568848 CRACR2BQ8N4Y2 399 aaPredicted RBP18.27■□□□□ 0.52
USB1-214ENST00000568848 MIGA1Q8NAN2 632 aa18.27■□□□□ 0.52
USB1-214ENST00000568848 USP6NLQ92738 828 aa18.27■□□□□ 0.52
USB1-214ENST00000568848 FRAT1Q92837 279 aaPredicted RBP18.27■□□□□ 0.52
USB1-214ENST00000568848 MTMR10Q9NXD2 777 aa18.27■□□□□ 0.52
USB1-214ENST00000568848 GH2P01242 217 aa18.26■□□□□ 0.51
USB1-214ENST00000568848 GNAI3P08754 354 aa18.26■□□□□ 0.51
USB1-214ENST00000568848 G3BP1Q13283 466 aaKnown RBP eCLIP18.26■□□□□ 0.51
USB1-214ENST00000568848 MORN1Q5T089 497 aa18.26■□□□□ 0.51
USB1-214ENST00000568848 WDR78Q5VTH9 848 aa18.26■□□□□ 0.51
USB1-214ENST00000568848 USP17L10C9JJH3 530 aa18.25■□□□□ 0.51
USB1-214ENST00000568848 ASNSP08243 561 aa18.25■□□□□ 0.51
USB1-214ENST00000568848 HOXA7P31268 230 aaPredicted RBP18.25■□□□□ 0.51
USB1-214ENST00000568848 ATN1P54259 1190 aaPredicted RBP18.25■□□□□ 0.51
USB1-214ENST00000568848 TNNI3KQ59H18 835 aa18.25■□□□□ 0.51
USB1-214ENST00000568848 ACER1Q8TDN7 264 aa18.25■□□□□ 0.51
USB1-214ENST00000568848 NOL10Q9BSC4 688 aaKnown RBP18.25■□□□□ 0.51
USB1-214ENST00000568848 FPGT-TNNI3KV9GXZ4 949 aa18.25■□□□□ 0.51
USB1-214ENST00000568848 MYH1P12882 1939 aa18.25■□□□□ 0.51
USB1-214ENST00000568848 CDH23Q9H251 3354 aa18.24■□□□□ 0.51
USB1-214ENST00000568848 GNAI2P04899 355 aa18.24■□□□□ 0.51
USB1-214ENST00000568848 PDE3AQ14432 1141 aa18.24■□□□□ 0.51
USB1-214ENST00000568848 LRIT3Q3SXY7 679 aa18.24■□□□□ 0.51
USB1-214ENST00000568848 ANO1Q5XXA6 986 aa18.24■□□□□ 0.51
USB1-214ENST00000568848 PLEKHH3Q7Z736 793 aa18.24■□□□□ 0.51
USB1-214ENST00000568848 SOCS4Q8WXH5 440 aa18.24■□□□□ 0.51
USB1-214ENST00000568848 TRIM34Q9BYJ4 488 aa18.24■□□□□ 0.51
USB1-214ENST00000568848 UQCRFS1P1P0C7P4 283 aa18.23■□□□□ 0.51
USB1-214ENST00000568848 CYP7A1P22680 504 aa18.23■□□□□ 0.51
USB1-214ENST00000568848 CCAR1Q8IX12 1150 aaKnown RBP18.23■□□□□ 0.51
USB1-214ENST00000568848 TMEM57Q8N5G2 664 aa18.23■□□□□ 0.51
USB1-214ENST00000568848 TRPV1Q8NER1 839 aa18.23■□□□□ 0.51
USB1-214ENST00000568848 TBC1D2Q9BYX2 928 aa18.23■□□□□ 0.51
USB1-214ENST00000568848 SENP6Q9GZR1 1112 aaPredicted RBP18.23■□□□□ 0.51
USB1-214ENST00000568848 CCDC8Q9H0W5 538 aaPredicted RBP18.23■□□□□ 0.51
USB1-214ENST00000568848 BTBD7Q9P203 1132 aa18.23■□□□□ 0.51
USB1-214ENST00000568848 BAG3O95817 575 aa18.22■□□□□ 0.51
USB1-214ENST00000568848 CYP2C19P33261 490 aa18.22■□□□□ 0.51
USB1-214ENST00000568848 RGS2P41220 211 aa18.22■□□□□ 0.51
USB1-214ENST00000568848 PPP4CP60510 307 aa18.22■□□□□ 0.51
USB1-214ENST00000568848 OS9Q13438 667 aaPredicted RBP18.22■□□□□ 0.51
USB1-214ENST00000568848 METTL16Q86W50 562 aaKnown RBP18.22■□□□□ 0.51
USB1-214ENST00000568848 NPLOC4Q8TAT6 608 aa18.22■□□□□ 0.51
USB1-214ENST00000568848 GUCD1Q96NT3 240 aa18.22■□□□□ 0.51
USB1-214ENST00000568848 FEZ1Q99689 392 aa18.22■□□□□ 0.51
USB1-214ENST00000568848 APBA2Q99767 749 aa18.22■□□□□ 0.51
USB1-214ENST00000568848 DHX36Q9H2U1 1008 aaKnown RBP18.22■□□□□ 0.51
USB1-214ENST00000568848 ANTXR1Q9H6X2 564 aa18.22■□□□□ 0.51
USB1-214ENST00000568848 CWC22Q9HCG8 908 aaKnown RBP18.22■□□□□ 0.51
USB1-214ENST00000568848 DBNLQ9UJU6 430 aaKnown RBP18.22■□□□□ 0.51
USB1-214ENST00000568848 HDAC5Q9UQL6 1122 aa18.22■□□□□ 0.51
USB1-214ENST00000568848 STXBP5LQ9Y2K9 1186 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms