RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 A0A087X0B3 334 aa10.21□□□□□ -0.77
HDGFL3-206ENST00000568294 CPDO75976 1380 aa10.21□□□□□ -0.77
HDGFL3-206ENST00000568294 CASP14P31944 242 aa10.21□□□□□ -0.77
HDGFL3-206ENST00000568294 PLA2G4AP47712 749 aa10.21□□□□□ -0.77
HDGFL3-206ENST00000568294 PUM3Q15397 648 aaKnown RBP10.21□□□□□ -0.77
HDGFL3-206ENST00000568294 NTRK3Q16288 839 aa10.21□□□□□ -0.77
HDGFL3-206ENST00000568294 TRIM65Q6PJ69 517 aa10.21□□□□□ -0.77
HDGFL3-206ENST00000568294 MAP3K15Q6ZN16 1313 aa10.21□□□□□ -0.77
HDGFL3-206ENST00000568294 CADPS2Q86UW7 1296 aa10.21□□□□□ -0.77
HDGFL3-206ENST00000568294 WDR17Q8IZU2 1322 aa10.21□□□□□ -0.77
HDGFL3-206ENST00000568294 LMO7Q8WWI1 1683 aa10.21□□□□□ -0.78
HDGFL3-206ENST00000568294 SYNRGQ9UMZ2 1314 aa10.21□□□□□ -0.78
HDGFL3-206ENST00000568294 GSG1L2A8MUP6 293 aa10.21□□□□□ -0.78
HDGFL3-206ENST00000568294 PATL2C9JE40 543 aaKnown RBP10.21□□□□□ -0.78
HDGFL3-206ENST00000568294 ANKRD65E5RJM6 399 aa10.21□□□□□ -0.78
HDGFL3-206ENST00000568294 ENC1O14682 589 aa10.21□□□□□ -0.78
HDGFL3-206ENST00000568294 N4BP3O15049 544 aa10.21□□□□□ -0.78
HDGFL3-206ENST00000568294 ARHGAP6O43182 974 aa10.21□□□□□ -0.78
HDGFL3-206ENST00000568294 SASH3O75995 380 aa10.21□□□□□ -0.78
HDGFL3-206ENST00000568294 GABPB1Q06547 395 aaPredicted RBP10.21□□□□□ -0.78
HDGFL3-206ENST00000568294 ADGRA1Q86SQ6 560 aa10.21□□□□□ -0.78
HDGFL3-206ENST00000568294 SLF1Q9BQI6 1058 aa10.21□□□□□ -0.78
HDGFL3-206ENST00000568294 TEX13AQ9BXU3 409 aaPredicted RBP10.21□□□□□ -0.78
HDGFL3-206ENST00000568294 PLEKHA4Q9H4M7 779 aa10.21□□□□□ -0.78
HDGFL3-206ENST00000568294 TRIM75PA6NK02 468 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 IKBKBO14920 756 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 ZMYND10O75800 440 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 ADAMTS2O95450 1211 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 CD44P16070 742 aaKnown RBP10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 GPKOWQ92917 476 aaPredicted RBP eCLIP10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 CCDC102AQ96A19 550 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 TMEM87BQ96K49 555 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 DRC1Q96MC2 740 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 PARD6BQ9BYG5 372 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 TFCP2L1Q9NZI6 479 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 NIP7Q9Y221 180 aaKnown RBP eCLIP10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 HPSEQ9Y251 543 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 SOS2Q07890 1332 aaPredicted RBP10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 ERVV-2B6SEH9 535 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 VEGFAP15692 232 aaPredicted RBP10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 IFIT1BQ5T764 474 aaKnown RBP10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 SUSD4Q5VX71 490 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 TC2NQ8N9U0 490 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 FANCBQ8NB91 859 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 TRIM10Q9UDY6 481 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 TUBE1Q9UJT0 475 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 FBXO2Q9UK22 296 aaPredicted RBP10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 GUCA1BQ9UMX6 200 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 AFDNP55196 1824 aaKnown RBP10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 SPATA31A3Q5VYP0 1347 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 AKR1B15C9JRZ8 316 aaPredicted RBP10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 PPP6R2O75170 966 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 TADA3O75528 432 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 FMNL1O95466 1100 aaPredicted RBP10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 IGHMBP2P38935 993 aaKnown RBP10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 NLRP5P59047 1200 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 SYCP1Q15431 976 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 RAD9BQ6WBX8 426 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 BRINP3Q76B58 766 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 LPIN2Q92539 896 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 CPVLQ9H3G5 476 aa10.2□□□□□ -0.78
HDGFL3-206ENST00000568294 CCP110O43303 1012 aa10.19□□□□□ -0.78
HDGFL3-206ENST00000568294 TNNT3P45378 269 aaPredicted RBP10.19□□□□□ -0.78
HDGFL3-206ENST00000568294 PPARAQ07869 468 aa10.19□□□□□ -0.78
HDGFL3-206ENST00000568294 SLC4A9Q96Q91 983 aa10.19□□□□□ -0.78
HDGFL3-206ENST00000568294 PSMB7Q99436 277 aa10.19□□□□□ -0.78
HDGFL3-206ENST00000568294 L2HGDHQ9H9P8 463 aa10.19□□□□□ -0.78
HDGFL3-206ENST00000568294 TRIM49BA6NDI0 452 aa10.19□□□□□ -0.78
HDGFL3-206ENST00000568294 PP2D1A8MPX8 630 aa10.19□□□□□ -0.78
HDGFL3-206ENST00000568294 KIF5CO60282 957 aa10.19□□□□□ -0.78
HDGFL3-206ENST00000568294 PDE8AO60658 829 aa10.19□□□□□ -0.78
HDGFL3-206ENST00000568294 CCDC175P0C221 793 aa10.19□□□□□ -0.78
HDGFL3-206ENST00000568294 CYP2D6P10635 497 aa10.19□□□□□ -0.78
HDGFL3-206ENST00000568294 UBE3CQ15386 1083 aa10.19□□□□□ -0.78
HDGFL3-206ENST00000568294 NUTM2AQ8IVF1 878 aaPredicted RBP10.19□□□□□ -0.78
HDGFL3-206ENST00000568294 MED15Q96RN5 788 aa10.19□□□□□ -0.78
HDGFL3-206ENST00000568294 ARFGAP3Q9NP61 516 aa10.19□□□□□ -0.78
HDGFL3-206ENST00000568294 AATFQ9NY61 560 aaKnown RBP eCLIP10.19□□□□□ -0.78
HDGFL3-206ENST00000568294 VPS18Q9P253 973 aa10.19□□□□□ -0.78
HDGFL3-206ENST00000568294 RIC1Q4ADV7 1423 aa10.19□□□□□ -0.78
HDGFL3-206ENST00000568294 H2AFXP16104 143 aaPredicted RBP10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 SMC1AQ14683 1233 aaKnown RBP10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 KCTD19Q17RG1 926 aaPredicted RBP10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 SLC35F6Q8N357 371 aa10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 RGS22Q8NE09 1264 aa10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 WASF1Q92558 559 aa10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 BPIFA3Q9BQP9 254 aa10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 KRT23Q9C075 422 aa10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 GDAQ9Y2T3 454 aa10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 CCDC66A2RUB6 948 aa10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 ADAMTS3O15072 1205 aa10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 DEXIO95424 95 aa10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 UQCRFS1P1P0C7P4 283 aa10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 HNRNPH2P55795 449 aaKnown RBP10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 RILPL1Q5EBL4 403 aa10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 NCAPH2Q6IBW4 605 aa10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 SLC51AQ86UW1 340 aa10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 CRACR2BQ8N4Y2 399 aaPredicted RBP10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 OVOS2A0A0G2JMS6 1433 aa10.18□□□□□ -0.78
HDGFL3-206ENST00000568294 MAGEB6P1A0A0J9YX57 407 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms