RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 FAM196BA6NMK8 535 aa5.82□□□□□ -1.48
CLK3-219ENST00000567805 APBB1O00213 710 aa5.82□□□□□ -1.48
CLK3-219ENST00000567805 PDHXO00330 501 aa5.82□□□□□ -1.48
CLK3-219ENST00000567805 GNRH1P01148 92 aa5.82□□□□□ -1.48
CLK3-219ENST00000567805 SLURP2P0DP57 97 aa5.82□□□□□ -1.48
CLK3-219ENST00000567805 CYP7A1P22680 504 aa5.82□□□□□ -1.48
CLK3-219ENST00000567805 SOX10P56693 466 aa5.82□□□□□ -1.48
CLK3-219ENST00000567805 LACTBP83111 547 aaPredicted RBP5.82□□□□□ -1.48
CLK3-219ENST00000567805 KIF22Q14807 665 aa5.82□□□□□ -1.48
CLK3-219ENST00000567805 C17orf99Q6UX52 265 aa5.82□□□□□ -1.48
CLK3-219ENST00000567805 METTL16Q86W50 562 aaKnown RBP5.82□□□□□ -1.48
CLK3-219ENST00000567805 MAGEB6Q8N7X4 407 aa5.82□□□□□ -1.48
CLK3-219ENST00000567805 PARK7Q99497 189 aaKnown RBP5.82□□□□□ -1.48
CLK3-219ENST00000567805 TMEM121BQ9BXQ6 578 aaPredicted RBP5.82□□□□□ -1.48
CLK3-219ENST00000567805 ANTXR1Q9H6X2 564 aa5.82□□□□□ -1.48
CLK3-219ENST00000567805 PTPN22Q9Y2R2 807 aa5.82□□□□□ -1.48
CLK3-219ENST00000567805 SLC45A1Q9Y2W3 748 aa5.82□□□□□ -1.48
CLK3-219ENST00000567805 NDUFB9Q9Y6M9 179 aa5.82□□□□□ -1.48
CLK3-219ENST00000567805 BAZ2AQ9UIF9 1905 aaKnown RBP5.82□□□□□ -1.48
CLK3-219ENST00000567805 TRIM75PA6NK02 468 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 HLA-DOAP06340 250 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 ASNSP08243 561 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 CAP2P40123 477 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 USP5P45974 858 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 PRMT2P55345 433 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 DYNLL1P63167 89 aaKnown RBP5.81□□□□□ -1.48
CLK3-219ENST00000567805 IRX5P78411 483 aaPredicted RBP5.81□□□□□ -1.48
CLK3-219ENST00000567805 CAP1Q01518 475 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 SLC9C2Q5TAH2 1124 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 GPAT2Q6NUI2 795 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 GADL1Q6ZQY3 521 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 FOXP4Q8IVH2 680 aaPredicted RBP5.81□□□□□ -1.48
CLK3-219ENST00000567805 MAPKAPK5Q8IW41 473 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 PLCD3Q8N3E9 789 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 CRACR2BQ8N4Y2 399 aaPredicted RBP5.81□□□□□ -1.48
CLK3-219ENST00000567805 MIGA1Q8NAN2 632 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 PROCA1Q8NCQ7 364 aaPredicted RBP5.81□□□□□ -1.48
CLK3-219ENST00000567805 ZNF280CQ8ND82 737 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 ARMC5Q96C12 935 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 TRIM34Q9BYJ4 488 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 LRRCC1Q9C099 1032 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 AS3MTQ9HBK9 375 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 GINM1Q9NU53 330 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 CPA4Q9UI42 421 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 PNMA3Q9UL41 463 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 TAOK2Q9UL54 1235 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 AGTPBP1Q9UPW5 1226 aa5.81□□□□□ -1.48
CLK3-219ENST00000567805 MAGEB6P1A0A0J9YX57 407 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 USP17L5A8MUK1 530 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 GOLIM4O00461 696 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 CYP2C8P10632 490 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 BCRP11274 1271 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 PDE6AP16499 860 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 ATP5JP18859 108 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 PSMC4P43686 418 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 SPP2Q13103 211 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 PABPC4Q13310 644 aaKnown RBP eCLIP5.8□□□□□ -1.48
CLK3-219ENST00000567805 RRP1BQ14684 758 aaKnown RBP5.8□□□□□ -1.48
CLK3-219ENST00000567805 SLC9C1Q4G0N8 1177 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 NBPF11Q86T75 865 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 CCDC84Q86UT8 332 aaPredicted RBP5.8□□□□□ -1.48
CLK3-219ENST00000567805 DNAJC2Q99543 621 aaKnown RBP5.8□□□□□ -1.48
CLK3-219ENST00000567805 HAUS7Q99871 368 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 RIOK1Q9BRS2 568 aaKnown RBP5.8□□□□□ -1.48
CLK3-219ENST00000567805 WDR18Q9BV38 432 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 ARHGAP39Q9C0H5 1083 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.8□□□□□ -1.481e-6■■□□□ 11.8
CLK3-219ENST00000567805 BCL11AQ9H165 835 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 EHD4Q9H223 541 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 DNAJC18Q9H819 358 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 PAG1Q9NWQ8 432 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.8□□□□□ -1.48
CLK3-219ENST00000567805 SAP30BPQ9UHR5 308 aaKnown RBP5.8□□□□□ -1.48
CLK3-219ENST00000567805 SERPINB13Q9UIV8 391 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 PALD1Q9ULE6 856 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 PTCH2Q9Y6C5 1203 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 DOCK3Q8IZD9 2030 aa5.8□□□□□ -1.48
CLK3-219ENST00000567805 ZNF532Q9HCE3 1301 aa5.79□□□□□ -1.48
CLK3-219ENST00000567805 TCRBV5S4A2TA0A5A2 114 aa5.79□□□□□ -1.48
CLK3-219ENST00000567805 C19orf81C9J6K1 198 aa5.79□□□□□ -1.48
CLK3-219ENST00000567805 FMNL1O95466 1100 aaPredicted RBP5.79□□□□□ -1.48
CLK3-219ENST00000567805 HOXD10P28358 340 aa5.79□□□□□ -1.48
CLK3-219ENST00000567805 ADD2P35612 726 aa5.79□□□□□ -1.48
CLK3-219ENST00000567805 HMGCS2P54868 508 aa5.79□□□□□ -1.48
CLK3-219ENST00000567805 FCGRTP55899 365 aa5.79□□□□□ -1.48
CLK3-219ENST00000567805 RRP1P56182 461 aaKnown RBP5.79□□□□□ -1.48
CLK3-219ENST00000567805 SH3D19Q5HYK7 790 aa5.79□□□□□ -1.48
CLK3-219ENST00000567805 TREML2Q5T2D2 321 aa5.79□□□□□ -1.48
CLK3-219ENST00000567805 TATDN1Q6P1N9 297 aa5.79□□□□□ -1.48
CLK3-219ENST00000567805 TTC6Q86TZ1 520 aa5.79□□□□□ -1.48
CLK3-219ENST00000567805 SMCR8Q8TEV9 937 aaPredicted RBP5.79□□□□□ -1.48
CLK3-219ENST00000567805 GPATCH3Q96I76 525 aa5.79□□□□□ -1.48
CLK3-219ENST00000567805 ZNF333Q96JL9 665 aa5.79□□□□□ -1.48
CLK3-219ENST00000567805 TRIM47Q96LD4 638 aa5.79□□□□□ -1.48
CLK3-219ENST00000567805 TMEM106CQ9BVX2 250 aa5.79□□□□□ -1.48
CLK3-219ENST00000567805 CRNKL1Q9BZJ0 848 aaKnown RBP5.79□□□□□ -1.48
CLK3-219ENST00000567805 BOLA2Q9H3K6 86 aa5.79□□□□□ -1.48
CLK3-219ENST00000567805 DCTPP1Q9H773 170 aa5.79□□□□□ -1.48
CLK3-219ENST00000567805 SRRDQ9UH36 339 aa5.79□□□□□ -1.48
CLK3-219ENST00000567805 ZBTB21Q9ULJ3 1066 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms