RNA–Protein interactions for RNA: ENST00000567133.1

CNOT1-210, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-210ENST00000567133 ZSCAN25Q6NSZ9 544 aa13.24□□□□□ -0.29
CNOT1-210ENST00000567133 SMCR8Q8TEV9 937 aaPredicted RBP13.24□□□□□ -0.29
CNOT1-210ENST00000567133 AS3MTQ9HBK9 375 aa13.24□□□□□ -0.29
CNOT1-210ENST00000567133 ZBTB21Q9ULJ3 1066 aa13.24□□□□□ -0.29
CNOT1-210ENST00000567133 CYP2D7A0A087X1C5 515 aa13.23□□□□□ -0.29
CNOT1-210ENST00000567133 MPHOSPH10O00566 681 aaKnown RBP13.23□□□□□ -0.29
CNOT1-210ENST00000567133 ASNSP08243 561 aa13.23□□□□□ -0.29
CNOT1-210ENST00000567133 LACTBP83111 547 aaPredicted RBP13.23□□□□□ -0.29
CNOT1-210ENST00000567133 TMED8Q6PL24 325 aaPredicted RBP13.23□□□□□ -0.29
CNOT1-210ENST00000567133 STK11IPQ8N1F8 1099 aa13.23□□□□□ -0.29
CNOT1-210ENST00000567133 SLC44A5Q8NCS7 719 aa13.23□□□□□ -0.29
CNOT1-210ENST00000567133 PUS7LQ9H0K6 701 aaKnown RBP13.23□□□□□ -0.29
CNOT1-210ENST00000567133 DCP1AQ9NPI6 582 aaPredicted RBP13.23□□□□□ -0.29
CNOT1-210ENST00000567133 TMOD4Q9NZQ9 345 aa13.23□□□□□ -0.29
CNOT1-210ENST00000567133 AGTPBP1Q9UPW5 1226 aa13.23□□□□□ -0.29
CNOT1-210ENST00000567133 PTPN22Q9Y2R2 807 aa13.23□□□□□ -0.29
CNOT1-210ENST00000567133 SLC4A4Q9Y6R1 1079 aa13.23□□□□□ -0.29
CNOT1-210ENST00000567133 DDX60LQ5H9U9 1706 aaKnown RBP13.22□□□□□ -0.29
CNOT1-210ENST00000567133 ERC2O15083 957 aa13.22□□□□□ -0.29
CNOT1-210ENST00000567133 FMNL1O95466 1100 aaPredicted RBP13.22□□□□□ -0.29
CNOT1-210ENST00000567133 MX1P20591 662 aa13.22□□□□□ -0.29
CNOT1-210ENST00000567133 UBE3CQ15386 1083 aa13.22□□□□□ -0.29
CNOT1-210ENST00000567133 ABCB5Q2M3G0 1257 aa13.22□□□□□ -0.29
CNOT1-210ENST00000567133 CERKLQ49MI3 558 aaPredicted RBP13.22□□□□□ -0.29
CNOT1-210ENST00000567133 C17orf99Q6UX52 265 aa13.22□□□□□ -0.29
CNOT1-210ENST00000567133 KBTBD3Q8NAB2 608 aa13.22□□□□□ -0.29
CNOT1-210ENST00000567133 DYNLL2Q96FJ2 89 aa13.22□□□□□ -0.29
CNOT1-210ENST00000567133 DDRGK1Q96HY6 314 aa13.22□□□□□ -0.29
CNOT1-210ENST00000567133 FEZ1Q99689 392 aa13.22□□□□□ -0.29
CNOT1-210ENST00000567133 FSD1Q9BTV5 496 aa13.22□□□□□ -0.29
CNOT1-210ENST00000567133 TTC41PQ6P2S7 1318 aa13.21□□□□□ -0.29
CNOT1-210ENST00000567133 ADGRA2Q96PE1 1338 aa13.21□□□□□ -0.29
CNOT1-210ENST00000567133 SMIM22K7EJ46 135 aa13.21□□□□□ -0.29
CNOT1-210ENST00000567133 RNF113AO15541 343 aaKnown RBP13.21□□□□□ -0.29
CNOT1-210ENST00000567133 GLRX3O76003 335 aaKnown RBP13.21□□□□□ -0.29
CNOT1-210ENST00000567133 CTGFP29279 349 aa13.21□□□□□ -0.29
CNOT1-210ENST00000567133 PSMC4P43686 418 aa13.21□□□□□ -0.29
CNOT1-210ENST00000567133 HDAC1Q13547 482 aaPredicted RBP13.21□□□□□ -0.29
CNOT1-210ENST00000567133 ARHGEF6Q15052 776 aa13.21□□□□□ -0.29
CNOT1-210ENST00000567133 METTL16Q86W50 562 aaKnown RBP13.21□□□□□ -0.29
CNOT1-210ENST00000567133 AMOTL1Q8IY63 956 aa13.21□□□□□ -0.29
CNOT1-210ENST00000567133 ANKRD13CQ8N6S4 541 aa13.21□□□□□ -0.29
CNOT1-210ENST00000567133 PI4K2BQ8TCG2 481 aa13.21□□□□□ -0.29
CNOT1-210ENST00000567133 GCC1Q96CN9 775 aa13.21□□□□□ -0.29
CNOT1-210ENST00000567133 TBC1D2Q9BYX2 928 aa13.21□□□□□ -0.29
CNOT1-210ENST00000567133 LNPKQ9C0E8 428 aa13.21□□□□□ -0.29
CNOT1-210ENST00000567133 EHD4Q9H223 541 aa13.21□□□□□ -0.29
CNOT1-210ENST00000567133 CABP5Q9NP86 173 aa13.21□□□□□ -0.29
CNOT1-210ENST00000567133 PTCH2Q9Y6C5 1203 aa13.21□□□□□ -0.29
CNOT1-210ENST00000567133 LOC285556D6RIA3 1793 aa13.2□□□□□ -0.3
CNOT1-210ENST00000567133 MYH8P13535 1937 aa13.2□□□□□ -0.3
CNOT1-210ENST00000567133 USP17L12C9JPN9 530 aa13.2□□□□□ -0.3
CNOT1-210ENST00000567133 USP17L21D6R901 530 aa13.2□□□□□ -0.3
CNOT1-210ENST00000567133 M0R2C6 588 aa13.2□□□□□ -0.3
CNOT1-210ENST00000567133 OSBPP22059 807 aa13.2□□□□□ -0.3
CNOT1-210ENST00000567133 SHMT1P34896 483 aa13.2□□□□□ -0.3
CNOT1-210ENST00000567133 BACE1P56817 501 aa13.2□□□□□ -0.3
CNOT1-210ENST00000567133 TATDN1Q6P1N9 297 aa13.2□□□□□ -0.3
CNOT1-210ENST00000567133 PROCA1Q8NCQ7 364 aaPredicted RBP13.2□□□□□ -0.3
CNOT1-210ENST00000567133 OSBP2Q969R2 916 aa13.2□□□□□ -0.3
CNOT1-210ENST00000567133 TRIM47Q96LD4 638 aa13.2□□□□□ -0.3
CNOT1-210ENST00000567133 RWDD1Q9H446 243 aaPredicted RBP13.2□□□□□ -0.3
CNOT1-210ENST00000567133 ATP8A2Q9NTI2 1148 aa13.2□□□□□ -0.3
CNOT1-210ENST00000567133 PNMA3Q9UL41 463 aa13.2□□□□□ -0.3
CNOT1-210ENST00000567133 USP17L10C9JJH3 530 aa13.19□□□□□ -0.3
CNOT1-210ENST00000567133 IGHDP01880 384 aa13.19□□□□□ -0.3
CNOT1-210ENST00000567133 APPP05067 770 aa13.19□□□□□ -0.3
CNOT1-210ENST00000567133 IRX3P78415 501 aaPredicted RBP13.19□□□□□ -0.3
CNOT1-210ENST00000567133 SLC9C1Q4G0N8 1177 aa13.19□□□□□ -0.3
CNOT1-210ENST00000567133 ACER1Q8TDN7 264 aa13.19□□□□□ -0.3
CNOT1-210ENST00000567133 APPBP2Q92624 585 aa13.19□□□□□ -0.3
CNOT1-210ENST00000567133 WDR18Q9BV38 432 aa13.19□□□□□ -0.3
CNOT1-210ENST00000567133 ASCC2Q9H1I8 757 aaPredicted RBP13.19□□□□□ -0.3
CNOT1-210ENST00000567133 TAOK2Q9UL54 1235 aa13.19□□□□□ -0.3
CNOT1-210ENST00000567133 MINDY4BA8MYZ0 360 aa13.18□□□□□ -0.3
CNOT1-210ENST00000567133 GPAA1O43292 621 aa13.18□□□□□ -0.3
CNOT1-210ENST00000567133 PEX10O60683 326 aa13.18□□□□□ -0.3
CNOT1-210ENST00000567133 BCRP11274 1271 aa13.18□□□□□ -0.3
CNOT1-210ENST00000567133 FCGRTP55899 365 aa13.18□□□□□ -0.3
CNOT1-210ENST00000567133 GABPAQ06546 454 aa13.18□□□□□ -0.3
CNOT1-210ENST00000567133 PABPC4Q13310 644 aaKnown RBP eCLIP13.18□□□□□ -0.3
CNOT1-210ENST00000567133 SEPT2Q15019 361 aa13.18□□□□□ -0.3
CNOT1-210ENST00000567133 USP17L2Q6R6M4 530 aa13.18□□□□□ -0.3
CNOT1-210ENST00000567133 CLEC10AQ8IUN9 316 aa13.18□□□□□ -0.3
CNOT1-210ENST00000567133 SH3TC2Q8TF17 1288 aa13.18□□□□□ -0.3
CNOT1-210ENST00000567133 STRBPQ96SI9 672 aaKnown RBP13.18□□□□□ -0.3
CNOT1-210ENST00000567133 SEC62Q99442 399 aaKnown RBP13.18□□□□□ -0.3
CNOT1-210ENST00000567133 SLC45A1Q9Y2W3 748 aa13.18□□□□□ -0.3
CNOT1-210ENST00000567133 MGAMO43451 1857 aa13.18□□□□□ -0.3
CNOT1-210ENST00000567133 MYPNQ86TC9 1320 aa13.17□□□□□ -0.3
CNOT1-210ENST00000567133 C19orf81C9J6K1 198 aa13.17□□□□□ -0.3
CNOT1-210ENST00000567133 ZFYP08048 801 aaPredicted RBP13.17□□□□□ -0.3
CNOT1-210ENST00000567133 TDO2P48775 406 aa13.17□□□□□ -0.3
CNOT1-210ENST00000567133 PDE1AP54750 535 aa13.17□□□□□ -0.3
CNOT1-210ENST00000567133 ATP2B2Q01814 1243 aa13.17□□□□□ -0.3
CNOT1-210ENST00000567133 MLLT1Q03111 559 aaPredicted RBP13.17□□□□□ -0.3
CNOT1-210ENST00000567133 LRRFIP1Q32MZ4 808 aaKnown RBP13.17□□□□□ -0.3
CNOT1-210ENST00000567133 SH3D19Q5HYK7 790 aa13.17□□□□□ -0.3
CNOT1-210ENST00000567133 C12orf60Q5U649 245 aa13.17□□□□□ -0.3
CNOT1-210ENST00000567133 CTR9Q6PD62 1173 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms