RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 CTR9Q6PD62 1173 aa16.41■□□□□ 0.22
SPG7-215ENST00000566682 CCDC129Q6ZRS4 1044 aa16.41■□□□□ 0.22
SPG7-215ENST00000566682 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.41■□□□□ 0.22
SPG7-215ENST00000566682 CYP2D7A0A087X1C5 515 aa16.4■□□□□ 0.22
SPG7-215ENST00000566682 A0A0D9SFI3 127 aa16.4■□□□□ 0.22
SPG7-215ENST00000566682 APPP05067 770 aa16.4■□□□□ 0.22
SPG7-215ENST00000566682 GTF2A2P52657 109 aa16.4■□□□□ 0.22
SPG7-215ENST00000566682 NMIQ13287 307 aaPredicted RBP16.4■□□□□ 0.22
SPG7-215ENST00000566682 MCMDC2Q4G0Z9 681 aa16.4■□□□□ 0.22
SPG7-215ENST00000566682 C12orf60Q5U649 245 aa16.4■□□□□ 0.22
SPG7-215ENST00000566682 TATDN1Q6P1N9 297 aa16.4■□□□□ 0.22
SPG7-215ENST00000566682 GIMAP6Q6P9H5 292 aa16.4■□□□□ 0.22
SPG7-215ENST00000566682 AMOTL1Q8IY63 956 aa16.4■□□□□ 0.22
SPG7-215ENST00000566682 RNF186Q9NXI6 227 aa16.4■□□□□ 0.22
SPG7-215ENST00000566682 ZHX2Q9Y6X8 837 aa16.4■□□□□ 0.22
SPG7-215ENST00000566682 MYH8P13535 1937 aa16.4■□□□□ 0.22
SPG7-215ENST00000566682 TESPA1A2RU30 521 aaPredicted RBP16.39■□□□□ 0.21
SPG7-215ENST00000566682 SMIM22K7EJ46 135 aa16.39■□□□□ 0.21
SPG7-215ENST00000566682 TRPA1O75762 1119 aa16.39■□□□□ 0.21
SPG7-215ENST00000566682 JAG1P78504 1218 aa16.39■□□□□ 0.21
SPG7-215ENST00000566682 CCDC84Q86UT8 332 aaPredicted RBP16.39■□□□□ 0.21
SPG7-215ENST00000566682 SKAP1Q86WV1 359 aa16.39■□□□□ 0.21
SPG7-215ENST00000566682 IFNL3Q8IZI9 196 aa16.39■□□□□ 0.21
SPG7-215ENST00000566682 DYNLL2Q96FJ2 89 aa16.39■□□□□ 0.21
SPG7-215ENST00000566682 EPB41L4AQ9HCS5 686 aaPredicted RBP16.39■□□□□ 0.21
SPG7-215ENST00000566682 ARPP21Q9UBL0 812 aaPredicted RBP16.39■□□□□ 0.21
SPG7-215ENST00000566682 CCL15-CCL14A0A0B4J2E2 113 aa16.38■□□□□ 0.21
SPG7-215ENST00000566682 CA12O43570 354 aa16.38■□□□□ 0.21
SPG7-215ENST00000566682 GDF11O95390 407 aa16.38■□□□□ 0.21
SPG7-215ENST00000566682 SHMT1P34896 483 aa16.38■□□□□ 0.21
SPG7-215ENST00000566682 SNAPC2Q13487 334 aa16.38■□□□□ 0.21
SPG7-215ENST00000566682 CCL15Q16663 113 aa16.38■□□□□ 0.21
SPG7-215ENST00000566682 SHROOM1Q2M3G4 852 aaPredicted RBP16.38■□□□□ 0.21
SPG7-215ENST00000566682 SBK1Q52WX2 424 aa16.38■□□□□ 0.21
SPG7-215ENST00000566682 IFNL1Q8IU54 200 aa16.38■□□□□ 0.21
SPG7-215ENST00000566682 PTPN18Q99952 460 aa16.38■□□□□ 0.21
SPG7-215ENST00000566682 PPP4R2Q9NY27 417 aa16.38■□□□□ 0.21
SPG7-215ENST00000566682 TSKSQ9UJT2 592 aa16.38■□□□□ 0.21
SPG7-215ENST00000566682 KCNH4Q9UQ05 1017 aa16.38■□□□□ 0.21
SPG7-215ENST00000566682 AFG3L2Q9Y4W6 797 aa16.38■□□□□ 0.21
SPG7-215ENST00000566682 PTPRFP10586 1907 aa16.37■□□□□ 0.21
SPG7-215ENST00000566682 MINDY4BA8MYZ0 360 aa16.37■□□□□ 0.21
SPG7-215ENST00000566682 HIP1O00291 1037 aa16.37■□□□□ 0.21
SPG7-215ENST00000566682 IGF2BP3O00425 579 aaKnown RBP eCLIP16.37■□□□□ 0.21
SPG7-215ENST00000566682 CXCL11O14625 94 aa16.37■□□□□ 0.21
SPG7-215ENST00000566682 ASNSP08243 561 aa16.37■□□□□ 0.21
SPG7-215ENST00000566682 CETPP11597 493 aa16.37■□□□□ 0.21
SPG7-215ENST00000566682 TDO2P48775 406 aa16.37■□□□□ 0.21
SPG7-215ENST00000566682 CTCFP49711 727 aaPredicted RBP16.37■□□□□ 0.21
SPG7-215ENST00000566682 CERKLQ49MI3 558 aaPredicted RBP16.37■□□□□ 0.21
SPG7-215ENST00000566682 VPS53Q5VIR6 699 aa16.37■□□□□ 0.21
SPG7-215ENST00000566682 CWC27Q6UX04 472 aaKnown RBP16.37■□□□□ 0.21
SPG7-215ENST00000566682 SLC44A5Q8NCS7 719 aa16.37■□□□□ 0.21
SPG7-215ENST00000566682 BRI3BPQ8WY22 251 aa16.37■□□□□ 0.21
SPG7-215ENST00000566682 NACAP1Q9BZK3 213 aa16.37■□□□□ 0.21
SPG7-215ENST00000566682 DIAPH3Q9NSV4 1193 aa16.37■□□□□ 0.21
SPG7-215ENST00000566682 GINM1Q9NU53 330 aa16.37■□□□□ 0.21
SPG7-215ENST00000566682 SAGE1Q9NXZ1 904 aa16.37■□□□□ 0.21
SPG7-215ENST00000566682 SWAP70Q9UH65 585 aa16.37■□□□□ 0.21
SPG7-215ENST00000566682 USP17L5A8MUK1 530 aa16.36■□□□□ 0.21
SPG7-215ENST00000566682 FOXP2O15409 715 aa16.36■□□□□ 0.21
SPG7-215ENST00000566682 HSPA8P11142 646 aaKnown RBP16.36■□□□□ 0.21
SPG7-215ENST00000566682 CDK8P49336 464 aa16.36■□□□□ 0.21
SPG7-215ENST00000566682 C16orf86Q6ZW13 317 aa16.36■□□□□ 0.21
SPG7-215ENST00000566682 ZNF589Q86UQ0 364 aaPredicted RBP16.36■□□□□ 0.21
SPG7-215ENST00000566682 NAPBQ9H115 298 aa16.36■□□□□ 0.21
SPG7-215ENST00000566682 TAOK2Q9UL54 1235 aa16.36■□□□□ 0.21
SPG7-215ENST00000566682 ZBTB21Q9ULJ3 1066 aa16.36■□□□□ 0.21
SPG7-215ENST00000566682 TRIM75PA6NK02 468 aa16.35■□□□□ 0.21
SPG7-215ENST00000566682 ALDH1A1P00352 501 aa16.35■□□□□ 0.21
SPG7-215ENST00000566682 GH2P01242 217 aa16.35■□□□□ 0.21
SPG7-215ENST00000566682 LBX1P52954 281 aa16.35■□□□□ 0.21
SPG7-215ENST00000566682 SPP2Q13103 211 aa16.35■□□□□ 0.21
SPG7-215ENST00000566682 ABCB5Q2M3G0 1257 aa16.35■□□□□ 0.21
SPG7-215ENST00000566682 OTUD7BQ6GQQ9 843 aa16.35■□□□□ 0.21
SPG7-215ENST00000566682 ZNF280CQ8ND82 737 aa16.35■□□□□ 0.21
SPG7-215ENST00000566682 TBC1D2Q9BYX2 928 aa16.35■□□□□ 0.21
SPG7-215ENST00000566682 AS3MTQ9HBK9 375 aa16.35■□□□□ 0.21
SPG7-215ENST00000566682 CABP5Q9NP86 173 aa16.35■□□□□ 0.21
SPG7-215ENST00000566682 CCDC171Q6TFL3 1326 aa16.35■□□□□ 0.21
SPG7-215ENST00000566682 A0A0G2JLL6 359 aaPredicted RBP16.34■□□□□ 0.21
SPG7-215ENST00000566682 TBC1D8O95759 1140 aa16.34■□□□□ 0.21
SPG7-215ENST00000566682 HSPD1P10809 573 aaKnown RBP16.34■□□□□ 0.21
SPG7-215ENST00000566682 MOGSQ13724 837 aa16.34■□□□□ 0.21
SPG7-215ENST00000566682 PRRT2Q7Z6L0 340 aaPredicted RBP16.34■□□□□ 0.21
SPG7-215ENST00000566682 STK11IPQ8N1F8 1099 aa16.34■□□□□ 0.21
SPG7-215ENST00000566682 FAM43AQ8N2R8 423 aa16.34■□□□□ 0.21
SPG7-215ENST00000566682 BTBD19C9JJ37 291 aa16.33■□□□□ 0.2
SPG7-215ENST00000566682 MPHOSPH10O00566 681 aaKnown RBP16.33■□□□□ 0.2
SPG7-215ENST00000566682 MFAP1P55081 439 aaKnown RBP16.33■□□□□ 0.2
SPG7-215ENST00000566682 RAB3GAP1Q15042 981 aa16.33■□□□□ 0.2
SPG7-215ENST00000566682 WDR18Q9BV38 432 aa16.33■□□□□ 0.2
SPG7-215ENST00000566682 CASP8AP2Q9UKL3 1982 aa16.33■□□□□ 0.2
SPG7-215ENST00000566682 FGAP02671 866 aa16.32■□□□□ 0.2
SPG7-215ENST00000566682 CHMLP26374 656 aa16.32■□□□□ 0.2
SPG7-215ENST00000566682 GUCY1A2P33402 732 aa16.32■□□□□ 0.2
SPG7-215ENST00000566682 PPARAQ07869 468 aa16.32■□□□□ 0.2
SPG7-215ENST00000566682 ALX1Q15699 326 aa16.32■□□□□ 0.2
SPG7-215ENST00000566682 FASTKD5Q7L8L6 764 aaKnown RBP16.32■□□□□ 0.2
SPG7-215ENST00000566682 CCDC17Q96LX7 622 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms