RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 ALX1Q15699 326 aa31.19■■■□□ 2.58
NME3-209ENST00000566600 CHMLP26374 656 aa31.18■■■□□ 2.58
NME3-209ENST00000566600 C16orf86Q6ZW13 317 aa31.18■■■□□ 2.58
NME3-209ENST00000566600 DYNLL2Q96FJ2 89 aa31.18■■■□□ 2.58
NME3-209ENST00000566600 ATAD5Q96QE3 1844 aa31.18■■■□□ 2.58
NME3-209ENST00000566600 RAD50Q92878 1312 aa31.18■■■□□ 2.58
NME3-209ENST00000566600 USP17L5A8MUK1 530 aa31.17■■■□□ 2.58
NME3-209ENST00000566600 CXCL11O14625 94 aa31.17■■■□□ 2.58
NME3-209ENST00000566600 CA12O43570 354 aa31.17■■■□□ 2.58
NME3-209ENST00000566600 HSPD1P10809 573 aaKnown RBP31.17■■■□□ 2.58
NME3-209ENST00000566600 CETPP11597 493 aa31.17■■■□□ 2.58
NME3-209ENST00000566600 EVX2Q03828 476 aa31.17■■■□□ 2.58
NME3-209ENST00000566600 VPS53Q5VIR6 699 aa31.17■■■□□ 2.58
NME3-209ENST00000566600 ZNF287Q9HBT7 754 aa31.17■■■□□ 2.58
NME3-209ENST00000566600 CABP5Q9NP86 173 aa31.17■■■□□ 2.58
NME3-209ENST00000566600 KCNH4Q9UQ05 1017 aa31.17■■■□□ 2.58
NME3-209ENST00000566600 ROBO3Q96MS0 1386 aa31.17■■■□□ 2.58
NME3-209ENST00000566600 TESPA1A2RU30 521 aaPredicted RBP31.16■■■□□ 2.58
NME3-209ENST00000566600 FOXP2O15409 715 aa31.16■■■□□ 2.58
NME3-209ENST00000566600 GDF11O95390 407 aa31.16■■■□□ 2.58
NME3-209ENST00000566600 SLC3A2P08195 630 aaKnown RBP31.16■■■□□ 2.58
NME3-209ENST00000566600 CDK8P49336 464 aa31.16■■■□□ 2.58
NME3-209ENST00000566600 ABCB5Q2M3G0 1257 aa31.16■■■□□ 2.58
NME3-209ENST00000566600 MS4A4AQ96JQ5 239 aa31.16■■■□□ 2.58
NME3-209ENST00000566600 AS3MTQ9HBK9 375 aa31.16■■■□□ 2.58
NME3-209ENST00000566600 ZBTB21Q9ULJ3 1066 aa31.16■■■□□ 2.58
NME3-209ENST00000566600 ZMYM6O95789 1325 aa31.16■■■□□ 2.58
NME3-209ENST00000566600 OTUD7BQ6GQQ9 843 aa31.15■■■□□ 2.58
NME3-209ENST00000566600 CCDC17Q96LX7 622 aa31.15■■■□□ 2.58
NME3-209ENST00000566600 AFG3L2Q9Y4W6 797 aa31.15■■■□□ 2.58
NME3-209ENST00000566600 CCL15-CCL14A0A0B4J2E2 113 aa31.14■■■□□ 2.58
NME3-209ENST00000566600 HSPA1AP0DMV8 641 aaKnown RBP31.14■■■□□ 2.58
NME3-209ENST00000566600 HSPA1BP0DMV9 641 aaKnown RBP31.14■■■□□ 2.58
NME3-209ENST00000566600 CCL15Q16663 113 aa31.14■■■□□ 2.58
NME3-209ENST00000566600 SLC44A5Q8NCS7 719 aa31.14■■■□□ 2.58
NME3-209ENST00000566600 ALDH1A1P00352 501 aa31.13■■■□□ 2.57
NME3-209ENST00000566600 GH2P01242 217 aa31.13■■■□□ 2.57
NME3-209ENST00000566600 PPARAQ07869 468 aa31.13■■■□□ 2.57
NME3-209ENST00000566600 SAGE1Q9NXZ1 904 aa31.13■■■□□ 2.57
NME3-209ENST00000566600 MYH8P13535 1937 aa31.12■■■□□ 2.57
NME3-209ENST00000566600 FGAP02671 866 aa31.12■■■□□ 2.57
NME3-209ENST00000566600 ZNF280CQ8ND82 737 aa31.12■■■□□ 2.57
NME3-209ENST00000566600 WDR18Q9BV38 432 aa31.12■■■□□ 2.57
NME3-209ENST00000566600 MKNK2Q9HBH9 465 aa31.12■■■□□ 2.57
NME3-209ENST00000566600 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.12■■■□□ 2.57
NME3-209ENST00000566600 PCNTO95613 3336 aa31.12■■■□□ 2.57
NME3-209ENST00000566600 SMIM22K7EJ46 135 aa31.11■■■□□ 2.57
NME3-209ENST00000566600 JAG1P78504 1218 aa31.11■■■□□ 2.57
NME3-209ENST00000566600 PDE4BQ07343 736 aa31.11■■■□□ 2.57
NME3-209ENST00000566600 IFNL1Q8IU54 200 aa31.11■■■□□ 2.57
NME3-209ENST00000566600 DSCC1Q9BVC3 393 aa31.11■■■□□ 2.57
NME3-209ENST00000566600 PHIPQ8WWQ0 1821 aa31.1■■■□□ 2.57
NME3-209ENST00000566600 MPHOSPH10O00566 681 aaKnown RBP31.1■■■□□ 2.57
NME3-209ENST00000566600 BRI3BPQ8WY22 251 aa31.1■■■□□ 2.57
NME3-209ENST00000566600 RNF186Q9NXI6 227 aa31.1■■■□□ 2.57
NME3-209ENST00000566600 ANAPC4Q9UJX5 808 aa31.1■■■□□ 2.57
NME3-209ENST00000566600 TRIM75PA6NK02 468 aa31.09■■■□□ 2.57
NME3-209ENST00000566600 SPP2Q13103 211 aa31.09■■■□□ 2.57
NME3-209ENST00000566600 RAB3GAP1Q15042 981 aa31.09■■■□□ 2.57
NME3-209ENST00000566600 TMEM179Q6ZVK1 233 aa31.09■■■□□ 2.57
NME3-209ENST00000566600 FASTKD5Q7L8L6 764 aaKnown RBP31.09■■■□□ 2.57
NME3-209ENST00000566600 CCDC84Q86UT8 332 aaPredicted RBP31.09■■■□□ 2.57
NME3-209ENST00000566600 A0A0G2JLL6 359 aaPredicted RBP31.08■■■□□ 2.57
NME3-209ENST00000566600 SGSM2O43147 1006 aa31.08■■■□□ 2.57
NME3-209ENST00000566600 SHROOM1Q2M3G4 852 aaPredicted RBP31.08■■■□□ 2.57
NME3-209ENST00000566600 CASC1Q6TDU7 716 aa31.08■■■□□ 2.57
NME3-209ENST00000566600 PRRT2Q7Z6L0 340 aaPredicted RBP31.08■■■□□ 2.57
NME3-209ENST00000566600 IGF2BP3O00425 579 aaKnown RBP eCLIP31.07■■■□□ 2.56
NME3-209ENST00000566600 TRPA1O75762 1119 aa31.07■■■□□ 2.56
NME3-209ENST00000566600 STK11IPQ8N1F8 1099 aa31.07■■■□□ 2.56
NME3-209ENST00000566600 PTPN18Q99952 460 aa31.07■■■□□ 2.56
NME3-209ENST00000566600 ZCCHC17Q9NP64 241 aaKnown RBP31.07■■■□□ 2.56
NME3-209ENST00000566600 CTNNA3Q9UI47 895 aa31.07■■■□□ 2.56
NME3-209ENST00000566600 AKR1B1P15121 316 aa31.06■■■□□ 2.56
NME3-209ENST00000566600 ZNF444Q8N0Y2 327 aaPredicted RBP31.06■■■□□ 2.56
NME3-209ENST00000566600 IL25Q9H293 177 aa31.06■■■□□ 2.56
NME3-209ENST00000566600 C19orf81C9J6K1 198 aa31.05■■■□□ 2.56
NME3-209ENST00000566600 USP17L10C9JJH3 530 aa31.05■■■□□ 2.56
NME3-209ENST00000566600 CDC45O75419 566 aa31.05■■■□□ 2.56
NME3-209ENST00000566600 RASA1P20936 1047 aa31.05■■■□□ 2.56
NME3-209ENST00000566600 CTCFP49711 727 aaPredicted RBP31.05■■■□□ 2.56
NME3-209ENST00000566600 FOXN1O15353 648 aa31.04■■■□□ 2.56
NME3-209ENST00000566600 BACE1P56817 501 aa31.04■■■□□ 2.56
NME3-209ENST00000566600 SEPT2Q15019 361 aa31.04■■■□□ 2.56
NME3-209ENST00000566600 ANKRD23Q86SG2 305 aa31.04■■■□□ 2.56
NME3-209ENST00000566600 CFHR5Q9BXR6 569 aa31.04■■■□□ 2.56
NME3-209ENST00000566600 GUCY1A2P33402 732 aa31.03■■■□□ 2.56
NME3-209ENST00000566600 CTDSPL2Q05D32 466 aa31.03■■■□□ 2.56
NME3-209ENST00000566600 SH3D19Q5HYK7 790 aa31.03■■■□□ 2.56
NME3-209ENST00000566600 PROCA1Q8NCQ7 364 aaPredicted RBP31.03■■■□□ 2.56
NME3-209ENST00000566600 PTPRFP10586 1907 aa31.02■■■□□ 2.56
NME3-209ENST00000566600 BTBD19C9JJ37 291 aa31.02■■■□□ 2.56
NME3-209ENST00000566600 ZNF213O14771 459 aa31.02■■■□□ 2.56
NME3-209ENST00000566600 PCP11498 1178 aaKnown RBP31.02■■■□□ 2.56
NME3-209ENST00000566600 MOGSQ13724 837 aa31.02■■■□□ 2.56
NME3-209ENST00000566600 GADL1Q6ZQY3 521 aa31.02■■■□□ 2.56
NME3-209ENST00000566600 KIAA1211Q6ZU35 1233 aa31.02■■■□□ 2.56
NME3-209ENST00000566600 FAM43AQ8N2R8 423 aa31.02■■■□□ 2.56
NME3-209ENST00000566600 ESYT1Q9BSJ8 1104 aa31.02■■■□□ 2.56
NME3-209ENST00000566600 KANSL2Q9H9L4 492 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms