RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 KRT85P78386 507 aa10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 OLFM4Q6UX06 510 aa10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 NFXL1Q6ZNB6 911 aa10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 C16orf86Q6ZW13 317 aa10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 CDC37L1Q7L3B6 337 aa10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 USP17L1Q7RTZ2 530 aa10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 ZNF654Q8IZM8 581 aa10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 ENAHQ8N8S7 591 aaPredicted RBP10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 TEKT1Q969V4 418 aa10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 ZDHHC15Q96MV8 337 aa10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 PDGFDQ9GZP0 370 aaPredicted RBP10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 NCOA5Q9HCD5 579 aaKnown RBP10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 INCENPQ9NQS7 918 aa10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 TOMM22Q9NS69 142 aa10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 RBM28Q9NW13 759 aaKnown RBP10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 ORC3Q9UBD5 711 aaPredicted RBP10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 SERPINA10Q9UK55 444 aa10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 DDX49Q9Y6V7 483 aaKnown RBP10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 ECM29Q5VYK3 1845 aa10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 MYH1P12882 1939 aa10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 TCHHQ07283 1943 aa10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 MYH15Q9Y2K3 1946 aa10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 CYP2D7A0A087X1C5 515 aa10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 H3BQV1 296 aa10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 PRPF40AO75400 957 aaKnown RBP10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 FMNL1O95466 1100 aaPredicted RBP10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 USP17L8P0C7I0 530 aa10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 DPEP1P16444 411 aa10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 UBE2HP62256 183 aa10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 RTN1Q16799 776 aa10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 DOK7Q18PE1 504 aa10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 RRP12Q5JTH9 1297 aaKnown RBP10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 IFFO2Q5TF58 517 aa10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 BRAPQ7Z569 592 aa10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 TTC6Q86TZ1 520 aa10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 FAM177A1Q8N128 213 aaPredicted RBP10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 FANCBQ8NB91 859 aa10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 FBXO18Q8NFZ0 1043 aa10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 TGFBRAP1Q8WUH2 860 aa10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 PHF12Q96QT6 1004 aa10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 IDI2Q9BXS1 227 aa10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 EHD4Q9H223 541 aa10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 SENP2Q9HC62 589 aa10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 TTF2Q9UNY4 1162 aaKnown RBP10.33□□□□□ -0.76
LSM3P5-201ENST00000566307 RANBP6O60518 1105 aaKnown RBP10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 WDHD1O75717 1129 aaPredicted RBP10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 CYP2D6P10635 497 aa10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 NCLP19338 710 aaKnown RBP10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 CDC27P30260 824 aa10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 IARSP41252 1262 aaKnown RBP10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 CRKP46108 304 aa10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 GABPAQ06546 454 aa10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 TROAPQ12815 778 aa10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 IFIT1BQ5T764 474 aaKnown RBP10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 APOBEC3HQ6NTF7 200 aaKnown RBP10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 CATIPQ7Z7H3 387 aa10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 USP48Q86UV5 1035 aa10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 MICU3Q86XE3 530 aa10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 NEDD1Q8NHV4 660 aa10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 DDX11Q96FC9 970 aa10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 C8orf76Q96K31 380 aa10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 RNF26Q9BY78 433 aaPredicted RBP10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 PIM2Q9P1W9 311 aa10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 RBM27Q9P2N5 1060 aaKnown RBP10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 SWAP70Q9UH65 585 aa10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 CFAP45Q9UL16 551 aa10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 NAP1L2Q9ULW6 460 aaPredicted RBP10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 CD2APQ9Y5K6 639 aa10.32□□□□□ -0.76
LSM3P5-201ENST00000566307 PPIP5K2O43314 1243 aa10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 C21orf2O43822 256 aa10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 DEXIO95424 95 aa10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 POLR3DP05423 398 aaPredicted RBP10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 RASA1P20936 1047 aa10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 ADD1P35611 737 aaKnown RBP10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 ZNF445P59923 1031 aa10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 DNM1Q05193 864 aaKnown RBP10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 SSRP1Q08945 709 aaKnown RBP10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 PPP4R3BQ5MIZ7 849 aa10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 FOXD4L5Q5VV16 416 aaPredicted RBP10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 RCSD1Q6JBY9 416 aa10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 NBPF11Q86T75 865 aa10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 MAPKAPK5Q8IW41 473 aa10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 TRIM22Q8IYM9 498 aa10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 FOXD4L4Q8WXT5 416 aaPredicted RBP10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 SYAP1Q96A49 352 aaPredicted RBP10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 ZNF396Q96N95 335 aaPredicted RBP10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 DHX36Q9H2U1 1008 aaKnown RBP10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 DBNDD1Q9H9R9 158 aa10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 CNPY2Q9Y2B0 182 aa10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 FER1L6Q2WGJ9 1857 aa10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 LTBP3Q9NS15 1303 aa10.31□□□□□ -0.76
LSM3P5-201ENST00000566307 FSD2A1L4K1 749 aa10.3□□□□□ -0.76
LSM3P5-201ENST00000566307 TSPY2A6NKD2 308 aa10.3□□□□□ -0.76
LSM3P5-201ENST00000566307 SMIM22K7EJ46 135 aa10.3□□□□□ -0.76
LSM3P5-201ENST00000566307 PRPF3O43395 683 aaKnown RBP10.3□□□□□ -0.76
LSM3P5-201ENST00000566307 VIL1P09327 827 aaKnown RBP10.3□□□□□ -0.76
LSM3P5-201ENST00000566307 CDK8P49336 464 aa10.3□□□□□ -0.76
LSM3P5-201ENST00000566307 GNAQP50148 359 aa10.3□□□□□ -0.76
LSM3P5-201ENST00000566307 PLCD1P51178 756 aa10.3□□□□□ -0.76
LSM3P5-201ENST00000566307 FUT2Q10981 343 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms