RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 HSPD1P10809 573 aaKnown RBP15□□□□□ -0.01
SHCBP1-204ENST00000565887 CDK8P49336 464 aa15□□□□□ -0.01
SHCBP1-204ENST00000565887 NT5C2P49902 561 aa15□□□□□ -0.01
SHCBP1-204ENST00000565887 ABCB5Q2M3G0 1257 aa15□□□□□ -0.01
SHCBP1-204ENST00000565887 FASTKD5Q7L8L6 764 aaKnown RBP15□□□□□ -0.01
SHCBP1-204ENST00000565887 WDR18Q9BV38 432 aa15□□□□□ -0.01
SHCBP1-204ENST00000565887 DSCC1Q9BVC3 393 aa15□□□□□ -0.01
SHCBP1-204ENST00000565887 DNAJC18Q9H819 358 aa15□□□□□ -0.01
SHCBP1-204ENST00000565887 MKNK2Q9HBH9 465 aa15□□□□□ -0.01
SHCBP1-204ENST00000565887 AFG3L2Q9Y4W6 797 aa15□□□□□ -0.01
SHCBP1-204ENST00000565887 C19orf81C9J6K1 198 aa14.99□□□□□ -0.01
SHCBP1-204ENST00000565887 FGAP02671 866 aa14.99□□□□□ -0.01
SHCBP1-204ENST00000565887 PCP11498 1178 aaKnown RBP14.99□□□□□ -0.01
SHCBP1-204ENST00000565887 SHMT1P34896 483 aa14.99□□□□□ -0.01
SHCBP1-204ENST00000565887 SLC4A8Q2Y0W8 1093 aa14.99□□□□□ -0.01
SHCBP1-204ENST00000565887 CCDC129Q6ZRS4 1044 aa14.99□□□□□ -0.01
SHCBP1-204ENST00000565887 ZNF444Q8N0Y2 327 aaPredicted RBP14.99□□□□□ -0.01
SHCBP1-204ENST00000565887 ZNF280CQ8ND82 737 aa14.99□□□□□ -0.01
SHCBP1-204ENST00000565887 MS4A4AQ96JQ5 239 aa14.99□□□□□ -0.01
SHCBP1-204ENST00000565887 ANAPC4Q9UJX5 808 aa14.99□□□□□ -0.01
SHCBP1-204ENST00000565887 NAV1Q8NEY1 1877 aa14.98□□□□□ -0.01
SHCBP1-204ENST00000565887 CYP2D6P10635 497 aa14.98□□□□□ -0.01
SHCBP1-204ENST00000565887 GJA5P36382 358 aa14.98□□□□□ -0.01
SHCBP1-204ENST00000565887 PPARAQ07869 468 aa14.98□□□□□ -0.01
SHCBP1-204ENST00000565887 MKRN3Q13064 507 aaKnown RBP14.98□□□□□ -0.01
SHCBP1-204ENST00000565887 PPP4R3BQ5MIZ7 849 aa14.98□□□□□ -0.01
SHCBP1-204ENST00000565887 TMEM179Q6ZVK1 233 aa14.98□□□□□ -0.01
SHCBP1-204ENST00000565887 IFNL1Q8IU54 200 aa14.98□□□□□ -0.01
SHCBP1-204ENST00000565887 EPB41L4AQ9HCS5 686 aaPredicted RBP14.98□□□□□ -0.01
SHCBP1-204ENST00000565887 ZBTB21Q9ULJ3 1066 aa14.98□□□□□ -0.01
SHCBP1-204ENST00000565887 CCL15-CCL14A0A0B4J2E2 113 aa14.97□□□□□ -0.01
SHCBP1-204ENST00000565887 GH2P01242 217 aa14.97□□□□□ -0.01
SHCBP1-204ENST00000565887 CCL15Q16663 113 aa14.97□□□□□ -0.01
SHCBP1-204ENST00000565887 KIAA1211Q6ZU35 1233 aa14.97□□□□□ -0.01
SHCBP1-204ENST00000565887 ZNF589Q86UQ0 364 aaPredicted RBP14.97□□□□□ -0.01
SHCBP1-204ENST00000565887 CNKSR2Q8WXI2 1034 aa14.97□□□□□ -0.01
SHCBP1-204ENST00000565887 DYNLL2Q96FJ2 89 aa14.97□□□□□ -0.01
SHCBP1-204ENST00000565887 ZIC5Q96T25 663 aa14.97□□□□□ -0.01
SHCBP1-204ENST00000565887 CFHR5Q9BXR6 569 aa14.97□□□□□ -0.01
SHCBP1-204ENST00000565887 BAZ2AQ9UIF9 1905 aaKnown RBP14.97□□□□□ -0.01
SHCBP1-204ENST00000565887 ROBO3Q96MS0 1386 aa14.97□□□□□ -0.01
SHCBP1-204ENST00000565887 THSD7BQ9C0I4 1608 aa14.96□□□□□ -0.01
SHCBP1-204ENST00000565887 CYP2D7A0A087X1C5 515 aa14.96□□□□□ -0.01
SHCBP1-204ENST00000565887 USP17L10C9JJH3 530 aa14.96□□□□□ -0.01
SHCBP1-204ENST00000565887 MPHOSPH10O00566 681 aaKnown RBP14.96□□□□□ -0.01
SHCBP1-204ENST00000565887 ZNF213O14771 459 aa14.96□□□□□ -0.01
SHCBP1-204ENST00000565887 SGSM2O43147 1006 aa14.96□□□□□ -0.01
SHCBP1-204ENST00000565887 SLURP2P0DP57 97 aa14.96□□□□□ -0.01
SHCBP1-204ENST00000565887 CTCFP49711 727 aaPredicted RBP14.96□□□□□ -0.01
SHCBP1-204ENST00000565887 USP14P54578 494 aa14.96□□□□□ -0.01
SHCBP1-204ENST00000565887 SPP2Q13103 211 aa14.96□□□□□ -0.01
SHCBP1-204ENST00000565887 PABPC4Q13310 644 aaKnown RBP eCLIP14.96□□□□□ -0.01
SHCBP1-204ENST00000565887 RRP1BQ14684 758 aaKnown RBP14.96□□□□□ -0.01
SHCBP1-204ENST00000565887 VPS53Q5VIR6 699 aa14.96□□□□□ -0.01
SHCBP1-204ENST00000565887 PROCA1Q8NCQ7 364 aaPredicted RBP14.96□□□□□ -0.01
SHCBP1-204ENST00000565887 RNF41Q9H4P4 317 aaPredicted RBP14.96□□□□□ -0.01
SHCBP1-204ENST00000565887 KANSL2Q9H9L4 492 aa14.96□□□□□ -0.01
SHCBP1-204ENST00000565887 RNF186Q9NXI6 227 aa14.96□□□□□ -0.01
SHCBP1-204ENST00000565887 SLC45A1Q9Y2W3 748 aa14.96□□□□□ -0.01
SHCBP1-204ENST00000565887 OTOFQ9HC10 1997 aa14.96□□□□□ -0.01
SHCBP1-204ENST00000565887 A0A0G2JLL6 359 aaPredicted RBP14.95□□□□□ -0.02
SHCBP1-204ENST00000565887 FOXP2O15409 715 aa14.95□□□□□ -0.02
SHCBP1-204ENST00000565887 GDF11O95390 407 aa14.95□□□□□ -0.02
SHCBP1-204ENST00000565887 HSPA1AP0DMV8 641 aaKnown RBP14.95□□□□□ -0.02
SHCBP1-204ENST00000565887 HSPA1BP0DMV9 641 aaKnown RBP14.95□□□□□ -0.02
SHCBP1-204ENST00000565887 BACE1P56817 501 aa14.95□□□□□ -0.02
SHCBP1-204ENST00000565887 RAB3GAP1Q15042 981 aa14.95□□□□□ -0.02
SHCBP1-204ENST00000565887 IMMTQ16891 758 aaKnown RBP14.95□□□□□ -0.02
SHCBP1-204ENST00000565887 NOM1Q5C9Z4 860 aaKnown RBP14.95□□□□□ -0.02
SHCBP1-204ENST00000565887 SH3D19Q5HYK7 790 aa14.95□□□□□ -0.02
SHCBP1-204ENST00000565887 PRRT2Q7Z6L0 340 aaPredicted RBP14.95□□□□□ -0.02
SHCBP1-204ENST00000565887 ANKRD23Q86SG2 305 aa14.95□□□□□ -0.02
SHCBP1-204ENST00000565887 SH2D4AQ9H788 454 aa14.95□□□□□ -0.02
SHCBP1-204ENST00000565887 TMOD4Q9NZQ9 345 aa14.95□□□□□ -0.02
SHCBP1-204ENST00000565887 DOCK1Q14185 1865 aa14.95□□□□□ -0.02
SHCBP1-204ENST00000565887 DDX60LQ5H9U9 1706 aaKnown RBP14.95□□□□□ -0.02
SHCBP1-204ENST00000565887 SIPA1L1O43166 1804 aa14.94□□□□□ -0.02
SHCBP1-204ENST00000565887 TRIM75PA6NK02 468 aa14.94□□□□□ -0.02
SHCBP1-204ENST00000565887 EIF5BO60841 1220 aaKnown RBP14.94□□□□□ -0.02
SHCBP1-204ENST00000565887 CDC45O75419 566 aa14.94□□□□□ -0.02
SHCBP1-204ENST00000565887 TRPA1O75762 1119 aa14.94□□□□□ -0.02
SHCBP1-204ENST00000565887 FGRP09769 529 aa14.94□□□□□ -0.02
SHCBP1-204ENST00000565887 USP17L2Q6R6M4 530 aa14.94□□□□□ -0.02
SHCBP1-204ENST00000565887 SLC44A5Q8NCS7 719 aa14.94□□□□□ -0.02
SHCBP1-204ENST00000565887 BRI3BPQ8WY22 251 aa14.94□□□□□ -0.02
SHCBP1-204ENST00000565887 KIAA1683Q9H0B3 1180 aa14.94□□□□□ -0.02
SHCBP1-204ENST00000565887 ZFYVE28Q9HCC9 887 aa14.94□□□□□ -0.02
SHCBP1-204ENST00000565887 ARHGEF10LQ9HCE6 1279 aa14.94□□□□□ -0.02
SHCBP1-204ENST00000565887 U3KPZ7 1027 aaPredicted RBP14.94□□□□□ -0.02
SHCBP1-204ENST00000565887 ORC4O43929 436 aa14.93□□□□□ -0.02
SHCBP1-204ENST00000565887 RASA1P20936 1047 aa14.93□□□□□ -0.02
SHCBP1-204ENST00000565887 MFSD6Q6ZSS7 791 aa14.93□□□□□ -0.02
SHCBP1-204ENST00000565887 PTPN18Q99952 460 aa14.93□□□□□ -0.02
SHCBP1-204ENST00000565887 SYNPO2Q9UMS6 1093 aa14.93□□□□□ -0.02
SHCBP1-204ENST00000565887 BTBD19C9JJ37 291 aa14.92□□□□□ -0.02
SHCBP1-204ENST00000565887 IGF2BP3O00425 579 aaKnown RBP eCLIP14.92□□□□□ -0.02
SHCBP1-204ENST00000565887 TSPY3P0CV98 308 aa14.92□□□□□ -0.02
SHCBP1-204ENST00000565887 TSPY8P0CW00 308 aa14.92□□□□□ -0.02
SHCBP1-204ENST00000565887 JAG1P78504 1218 aa14.92□□□□□ -0.02
SHCBP1-204ENST00000565887 SEPT2Q15019 361 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms