RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 UBAC1Q9BSL1 405 aa9.18□□□□□ -0.94
CDH1-208ENST00000565810 NBPF3Q9H094 633 aa9.18□□□□□ -0.94
CDH1-208ENST00000565810 ZSWIM6Q9HCJ5 1215 aa9.18□□□□□ -0.94
CDH1-208ENST00000565810 GINM1Q9NU53 330 aa9.18□□□□□ -0.94
CDH1-208ENST00000565810 MYO5AQ9Y4I1 1855 aaKnown RBP9.18□□□□□ -0.94
CDH1-208ENST00000565810 TAF6LQ9Y6J9 622 aa9.18□□□□□ -0.94
CDH1-208ENST00000565810 MYH7P12883 1935 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 TRAF5O00463 557 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 IFIT3O14879 490 aaKnown RBP9.17□□□□□ -0.94
CDH1-208ENST00000565810 ST18O60284 1047 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 CTNND1O60716 968 aaKnown RBP9.17□□□□□ -0.94
CDH1-208ENST00000565810 USP2O75604 605 aaPredicted RBP9.17□□□□□ -0.94
CDH1-208ENST00000565810 CELF2O95319 508 aaKnown RBP9.17□□□□□ -0.94
CDH1-208ENST00000565810 ASNSP08243 561 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 RPS6KB1P23443 525 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 NEK4P51957 841 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 FKBP1BP68106 108 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 MAP3K9P80192 1104 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 FAM47AQ5JRC9 791 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 DLK2Q6UY11 383 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 TMEM179Q6ZVK1 233 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 RUFY3Q7L099 469 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 NEDD1Q8NHV4 660 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 KLRG1Q96E93 195 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 IL17RAQ96F46 866 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 TMEM87BQ96K49 555 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 MTA3Q9BTC8 594 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 DNAJC18Q9H819 358 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 PICK1Q9NRD5 415 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 TCP11L1Q9NUJ3 509 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 ZSWIM5Q9P217 1185 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 ANGEL1Q9UNK9 670 aaKnown RBP9.17□□□□□ -0.94
CDH1-208ENST00000565810 CSADQ9Y600 493 aa9.17□□□□□ -0.94
CDH1-208ENST00000565810 WDR19Q8NEZ3 1342 aa9.16□□□□□ -0.94
CDH1-208ENST00000565810 PHF20L1A8MW92 1017 aa9.16□□□□□ -0.94
CDH1-208ENST00000565810 PRC1O43663 620 aa9.16□□□□□ -0.94
CDH1-208ENST00000565810 GDF11O95390 407 aa9.16□□□□□ -0.94
CDH1-208ENST00000565810 ITGBL1O95965 494 aaPredicted RBP9.16□□□□□ -0.94
CDH1-208ENST00000565810 GH2P01242 217 aa9.16□□□□□ -0.94
CDH1-208ENST00000565810 SLURP2P0DP57 97 aa9.16□□□□□ -0.94
CDH1-208ENST00000565810 AKR1B1P15121 316 aa9.16□□□□□ -0.94
CDH1-208ENST00000565810 CAP2P40123 477 aa9.16□□□□□ -0.94
CDH1-208ENST00000565810 FSTL1Q12841 308 aa9.16□□□□□ -0.94
CDH1-208ENST00000565810 RAB3GAP1Q15042 981 aa9.16□□□□□ -0.94
CDH1-208ENST00000565810 ANKRD1Q15327 319 aa9.16□□□□□ -0.94
CDH1-208ENST00000565810 CHST3Q7LGC8 479 aa9.16□□□□□ -0.94
CDH1-208ENST00000565810 MB21D2Q8IYB1 491 aaPredicted RBP9.16□□□□□ -0.94
CDH1-208ENST00000565810 ANKRD13AQ8IZ07 590 aa9.16□□□□□ -0.94
CDH1-208ENST00000565810 TMTC2Q8N394 836 aa9.16□□□□□ -0.94
CDH1-208ENST00000565810 TTC14Q96N46 770 aa9.16□□□□□ -0.94
CDH1-208ENST00000565810 ZSCAN10Q96SZ4 725 aaPredicted RBP9.16□□□□□ -0.94
CDH1-208ENST00000565810 UPF3BQ9BZI7 483 aaKnown RBP9.16□□□□□ -0.94
CDH1-208ENST00000565810 KANSL2Q9H9L4 492 aa9.16□□□□□ -0.94
CDH1-208ENST00000565810 GBA2Q9HCG7 927 aaPredicted RBP9.16□□□□□ -0.94
CDH1-208ENST00000565810 PDRG1Q9NUG6 133 aa9.16□□□□□ -0.94
CDH1-208ENST00000565810 ZNF112Q9UJU3 913 aa9.16□□□□□ -0.94
CDH1-208ENST00000565810 TACC3Q9Y6A5 838 aa9.16□□□□□ -0.94
CDH1-208ENST00000565810 ADAMTSL1Q8N6G6 1762 aa9.15□□□□□ -0.94
CDH1-208ENST00000565810 UNCXA6NJT0 531 aa9.15□□□□□ -0.94
CDH1-208ENST00000565810 INPP5BP32019 993 aa9.15□□□□□ -0.94
CDH1-208ENST00000565810 EXOSC10Q01780 885 aaKnown RBP9.15□□□□□ -0.94
CDH1-208ENST00000565810 ATP2B2Q01814 1243 aa9.15□□□□□ -0.94
CDH1-208ENST00000565810 WTAPQ15007 396 aa9.15□□□□□ -0.94
CDH1-208ENST00000565810 MAP3K11Q16584 847 aa9.15□□□□□ -0.94
CDH1-208ENST00000565810 TMEM67Q5HYA8 995 aa9.15□□□□□ -0.94
CDH1-208ENST00000565810 IFIT1BQ5T764 474 aaKnown RBP9.15□□□□□ -0.94
CDH1-208ENST00000565810 SYNE3Q6ZMZ3 975 aa9.15□□□□□ -0.94
CDH1-208ENST00000565810 NFXL1Q6ZNB6 911 aa9.15□□□□□ -0.94
CDH1-208ENST00000565810 Q6ZUG5 572 aa9.15□□□□□ -0.94
CDH1-208ENST00000565810 CYB5R4Q7L1T6 521 aa9.15□□□□□ -0.94
CDH1-208ENST00000565810 DGKHQ86XP1 1220 aa9.15□□□□□ -0.94
CDH1-208ENST00000565810 SCYL3Q8IZE3 742 aa9.15□□□□□ -0.94
CDH1-208ENST00000565810 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.15□□□□□ -0.94
CDH1-208ENST00000565810 ZKSCAN3Q9BRR0 538 aa9.15□□□□□ -0.94
CDH1-208ENST00000565810 SH2D4AQ9H788 454 aa9.15□□□□□ -0.94
CDH1-208ENST00000565810 AS3MTQ9HBK9 375 aa9.15□□□□□ -0.94
CDH1-208ENST00000565810 ZBTB21Q9ULJ3 1066 aa9.15□□□□□ -0.94
CDH1-208ENST00000565810 STX8Q9UNK0 236 aa9.15□□□□□ -0.94
CDH1-208ENST00000565810 TNKSO95271 1327 aa9.14□□□□□ -0.95
CDH1-208ENST00000565810 CCDC69A6NI79 296 aa9.14□□□□□ -0.95
CDH1-208ENST00000565810 USP17L5A8MUK1 530 aa9.14□□□□□ -0.95
CDH1-208ENST00000565810 TTLL1O95922 423 aa9.14□□□□□ -0.95
CDH1-208ENST00000565810 CPA1P15085 419 aa9.14□□□□□ -0.95
CDH1-208ENST00000565810 LIFRP42702 1097 aa9.14□□□□□ -0.95
CDH1-208ENST00000565810 MCM2P49736 904 aa9.14□□□□□ -0.95
CDH1-208ENST00000565810 ICA1Q05084 483 aa9.14□□□□□ -0.95
CDH1-208ENST00000565810 RRP1BQ14684 758 aaKnown RBP9.14□□□□□ -0.95
CDH1-208ENST00000565810 SEPT2Q15019 361 aa9.14□□□□□ -0.95
CDH1-208ENST00000565810 NOL9Q5SY16 702 aaKnown RBP9.14□□□□□ -0.95
CDH1-208ENST00000565810 ZKSCAN4Q969J2 545 aaPredicted RBP9.14□□□□□ -0.95
CDH1-208ENST00000565810 SLC10A4Q96EP9 437 aa9.14□□□□□ -0.95
CDH1-208ENST00000565810 CEP95Q96GE4 821 aa9.14□□□□□ -0.95
CDH1-208ENST00000565810 TCEANC2Q96MN5 208 aa9.14□□□□□ -0.95
CDH1-208ENST00000565810 KIF2CQ99661 725 aa9.14□□□□□ -0.95
CDH1-208ENST00000565810 LRRC2Q9BYS8 371 aa9.14□□□□□ -0.95
CDH1-208ENST00000565810 TBC1D2Q9BYX2 928 aa9.14□□□□□ -0.95
CDH1-208ENST00000565810 ALDH8A1Q9H2A2 487 aaPredicted RBP9.14□□□□□ -0.95
CDH1-208ENST00000565810 KAT14Q9H8E8 782 aa9.14□□□□□ -0.95
CDH1-208ENST00000565810 ARHGEF10LQ9HCE6 1279 aa9.14□□□□□ -0.95
CDH1-208ENST00000565810 MTMR4Q9NYA4 1195 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms