RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 FBXL16Q8N461 479 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 FAM184AQ8NB25 1140 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 MTMR14Q8NCE2 650 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 GPT2Q8TD30 523 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 ZNF274Q96GC6 653 aaPredicted RBP8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 CHAMP1Q96JM3 812 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 STRBPQ96SI9 672 aaKnown RBP8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 NACAP1Q9BZK3 213 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 NAPBQ9H115 298 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 TMOD2Q9NZR1 351 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 ZNF70Q9UC06 446 aaPredicted RBP8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 TSKSQ9UJT2 592 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 NAP1L2Q9ULW6 460 aaPredicted RBP8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 CNPY2Q9Y2B0 182 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 DAGLAQ9Y4D2 1042 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 HTTP42858 3142 aa8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 PTPDC1A2A3K4 754 aa8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 TMEM88BA6NKF7 163 aa8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 GOLGA8BA8MQT2 603 aa8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 TCP10L2B9ZVM9 353 aa8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 H3BQV1 296 aa8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 DHX16O60231 1041 aaKnown RBP8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 LDHCP07864 332 aa8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 CACNB3P54284 484 aa8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 KRT85P78386 507 aa8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 GSTO1P78417 241 aa8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 SCRN1Q12765 414 aa8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 PRAMEF18Q5VWM3 479 aa8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 NAA16Q6N069 864 aaPredicted RBP8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 HHIPL2Q6UWX4 724 aa8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 SMARCC2Q8TAQ2 1214 aa8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 ZBED3Q96IU2 234 aaPredicted RBP8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 ZDHHC15Q96MV8 337 aa8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 NOL10Q9BSC4 688 aaKnown RBP8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 PGAP2Q9UHJ9 254 aa8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 RANBP2P49792 3224 aaKnown RBP8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 MROH7-TTC4A0A0A0MT08 1334 aa8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 PITPNM2Q9BZ72 1349 aa8.69□□□□□ -1.02
MAP1LC3B-205ENST00000564638 CENPFP49454 3210 aa8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 KLF18A0A0U1RQI7 1052 aa8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 PATL2C9JE40 543 aaKnown RBP8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 JAK2O60674 1132 aa8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 CELF2O95319 508 aaKnown RBP8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 XRCC6P12956 609 aaKnown RBP eCLIP8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 CYP7A1P22680 504 aa8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 BTDP43251 543 aa8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 TDO2P48775 406 aa8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 EVCP57679 992 aa8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 UBE2HP62256 183 aa8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 DNM1Q05193 864 aaKnown RBP8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 SPDYE2Q495Y8 402 aa8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 APOBEC3HQ6NTF7 200 aaKnown RBP8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 TMED8Q6PL24 325 aaPredicted RBP8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 TBC1D10CQ8IV04 446 aa8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 NSUN7Q8NE18 718 aaKnown RBP8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 NSUN4Q96CB9 384 aaKnown RBP8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 CDCA5Q96FF9 252 aa8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 CNNM2Q9H8M5 875 aa8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 ARMT1Q9H993 441 aa8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 GDPD2Q9HCC8 539 aa8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 USP40Q9NVE5 1235 aa8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 RBM27Q9P2N5 1060 aaKnown RBP8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 BRPF3Q9ULD4 1205 aa8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 BAZ2AQ9UIF9 1905 aaKnown RBP8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 CASP8AP2Q9UKL3 1982 aa8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 CUL9Q8IWT3 2517 aa8.68□□□□□ -1.02
MAP1LC3B-205ENST00000564638 MAGEB6P1A0A0J9YX57 407 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 GAKO14976 1311 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 ELP1O95163 1332 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 PDIA3P30101 505 aaKnown RBP8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 TNNI2P48788 182 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 ANTXR2P58335 489 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 CCT2P78371 535 aaKnown RBP8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 PICALMQ13492 652 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 TNFAIP1Q13829 316 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 PRKG1Q13976 671 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 TTLL12Q14166 644 aaPredicted RBP8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 PRPF38BQ5VTL8 546 aaKnown RBP8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 CDC42EP5Q6NZY7 148 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 CHST3Q7LGC8 479 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 FERMT3Q86UX7 667 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 GAS2L3Q86XJ1 694 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 IFNL3Q8IZI9 196 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 LCORLQ8N3X6 602 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 ZNF384Q8TF68 577 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 ANP32BQ92688 251 aaKnown RBP8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 DDX11Q96FC9 970 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 TMEM87BQ96K49 555 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 MRIQ9BWK5 157 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 KRT23Q9C075 422 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 NBPF3Q9H094 633 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 RNF41Q9H4P4 317 aaPredicted RBP8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 ZSCAN16Q9H4T2 348 aaPredicted RBP8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 EPB41L4AQ9HCS5 686 aaPredicted RBP8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 TMEM63CQ9P1W3 806 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 ABT1Q9ULW3 272 aaKnown RBP8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 SLC4A4Q9Y6R1 1079 aa8.67□□□□□ -1.02
MAP1LC3B-205ENST00000564638 MYH6P13533 1939 aa8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 NEDD4P46934 1319 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms