RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 ADGRA1Q86SQ6 560 aa11.56□□□□□ -0.56
UBFD1-203ENST00000564106 ZNF341Q9BYN7 854 aa11.56□□□□□ -0.56
UBFD1-203ENST00000564106 TMOD2Q9NZR1 351 aa11.56□□□□□ -0.56
UBFD1-203ENST00000564106 LRP2BPQ9P2M1 347 aa11.56□□□□□ -0.56
UBFD1-203ENST00000564106 PALD1Q9ULE6 856 aa11.56□□□□□ -0.56
UBFD1-203ENST00000564106 CSADQ9Y600 493 aa11.56□□□□□ -0.56
UBFD1-203ENST00000564106 CYP46A1Q9Y6A2 500 aa11.56□□□□□ -0.56
UBFD1-203ENST00000564106 MROH7-TTC4A0A0A0MT08 1334 aa11.56□□□□□ -0.56
UBFD1-203ENST00000564106 SLC27A2O14975 620 aa11.55□□□□□ -0.56
UBFD1-203ENST00000564106 ALDH1A1P00352 501 aa11.55□□□□□ -0.56
UBFD1-203ENST00000564106 HMGB1P09429 215 aaKnown RBP11.55□□□□□ -0.56
UBFD1-203ENST00000564106 PDE6AP16499 860 aa11.55□□□□□ -0.56
UBFD1-203ENST00000564106 GNAT2P19087 354 aa11.55□□□□□ -0.56
UBFD1-203ENST00000564106 SLC4A3P48751 1232 aa11.55□□□□□ -0.56
UBFD1-203ENST00000564106 GTF2A2P52657 109 aa11.55□□□□□ -0.56
UBFD1-203ENST00000564106 PPIL2Q13356 520 aa11.55□□□□□ -0.56
UBFD1-203ENST00000564106 PICALMQ13492 652 aa11.55□□□□□ -0.56
UBFD1-203ENST00000564106 ANKRD1Q15327 319 aa11.55□□□□□ -0.56
UBFD1-203ENST00000564106 TAF1CQ15572 869 aaPredicted RBP11.55□□□□□ -0.56
UBFD1-203ENST00000564106 SPTY2D1Q68D10 685 aaPredicted RBP11.55□□□□□ -0.56
UBFD1-203ENST00000564106 ERO1BQ86YB8 467 aa11.55□□□□□ -0.56
UBFD1-203ENST00000564106 NSUN4Q96CB9 384 aaKnown RBP11.55□□□□□ -0.56
UBFD1-203ENST00000564106 IDI2Q9BXS1 227 aa11.55□□□□□ -0.56
UBFD1-203ENST00000564106 PTPN22Q9Y2R2 807 aa11.55□□□□□ -0.56
UBFD1-203ENST00000564106 ZMYM6O95789 1325 aa11.55□□□□□ -0.56
UBFD1-203ENST00000564106 GPAA1O43292 621 aa11.54□□□□□ -0.56
UBFD1-203ENST00000564106 HSPD1P10809 573 aaKnown RBP11.54□□□□□ -0.56
UBFD1-203ENST00000564106 CASTP20810 708 aaKnown RBP11.54□□□□□ -0.56
UBFD1-203ENST00000564106 JAG1P78504 1218 aa11.54□□□□□ -0.56
UBFD1-203ENST00000564106 SP3Q02447 781 aa11.54□□□□□ -0.56
UBFD1-203ENST00000564106 NOL9Q5SY16 702 aaKnown RBP11.54□□□□□ -0.56
UBFD1-203ENST00000564106 VPS53Q5VIR6 699 aa11.54□□□□□ -0.56
UBFD1-203ENST00000564106 GPAT2Q6NUI2 795 aa11.54□□□□□ -0.56
UBFD1-203ENST00000564106 OSBP2Q969R2 916 aa11.54□□□□□ -0.56
UBFD1-203ENST00000564106 SEC62Q99442 399 aaKnown RBP11.54□□□□□ -0.56
UBFD1-203ENST00000564106 PIH1D3Q9NQM4 214 aaKnown RBP11.54□□□□□ -0.56
UBFD1-203ENST00000564106 CIZ1Q9ULV3 898 aaPredicted RBP11.54□□□□□ -0.56
UBFD1-203ENST00000564106 KCNH4Q9UQ05 1017 aa11.54□□□□□ -0.56
UBFD1-203ENST00000564106 PTCH2Q9Y6C5 1203 aa11.54□□□□□ -0.56
UBFD1-203ENST00000564106 ZNF532Q9HCE3 1301 aa11.54□□□□□ -0.56
UBFD1-203ENST00000564106 MGAMO43451 1857 aa11.53□□□□□ -0.56
UBFD1-203ENST00000564106 GPR75-ASB3A0A0A6YYF3 556 aa11.53□□□□□ -0.56
UBFD1-203ENST00000564106 M0R2C6 588 aa11.53□□□□□ -0.56
UBFD1-203ENST00000564106 PKN2Q16513 984 aaKnown RBP11.53□□□□□ -0.56
UBFD1-203ENST00000564106 IMMTQ16891 758 aaKnown RBP11.53□□□□□ -0.56
UBFD1-203ENST00000564106 BLOC1S2Q6QNY1 142 aa11.53□□□□□ -0.56
UBFD1-203ENST00000564106 RUFY3Q7L099 469 aa11.53□□□□□ -0.56
UBFD1-203ENST00000564106 DZIP1Q86YF9 867 aaKnown RBP11.53□□□□□ -0.56
UBFD1-203ENST00000564106 FAM163AQ96GL9 167 aaPredicted RBP11.53□□□□□ -0.56
UBFD1-203ENST00000564106 JAKMIP1Q96N16 626 aaKnown RBP11.53□□□□□ -0.56
UBFD1-203ENST00000564106 ZSWIM6Q9HCJ5 1215 aa11.53□□□□□ -0.56
UBFD1-203ENST00000564106 CPA4Q9UI42 421 aa11.53□□□□□ -0.56
UBFD1-203ENST00000564106 LOC285556D6RIA3 1793 aa11.52□□□□□ -0.57
UBFD1-203ENST00000564106 TCRBV5S4A2TA0A5A2 114 aa11.52□□□□□ -0.57
UBFD1-203ENST00000564106 MAP3K10Q02779 954 aa11.52□□□□□ -0.57
UBFD1-203ENST00000564106 PPATQ06203 517 aa11.52□□□□□ -0.57
UBFD1-203ENST00000564106 DCAF15Q66K64 600 aa11.52□□□□□ -0.57
UBFD1-203ENST00000564106 CCDC129Q6ZRS4 1044 aa11.52□□□□□ -0.57
UBFD1-203ENST00000564106 CERS3Q8IU89 383 aa11.52□□□□□ -0.57
UBFD1-203ENST00000564106 RASEFQ8IZ41 740 aa11.52□□□□□ -0.57
UBFD1-203ENST00000564106 MAGEB6Q8N7X4 407 aa11.52□□□□□ -0.57
UBFD1-203ENST00000564106 SH3RF3Q8TEJ3 882 aaPredicted RBP11.52□□□□□ -0.57
UBFD1-203ENST00000564106 UPF3BQ9BZI7 483 aaKnown RBP11.52□□□□□ -0.57
UBFD1-203ENST00000564106 NACAP1Q9BZK3 213 aa11.52□□□□□ -0.57
UBFD1-203ENST00000564106 ALDH8A1Q9H2A2 487 aaPredicted RBP11.52□□□□□ -0.57
UBFD1-203ENST00000564106 EFCC1Q9HA90 598 aa11.52□□□□□ -0.57
UBFD1-203ENST00000564106 CWC22Q9HCG8 908 aaKnown RBP11.52□□□□□ -0.57
UBFD1-203ENST00000564106 CHMP5Q9NZZ3 219 aa11.52□□□□□ -0.57
UBFD1-203ENST00000564106 RAI14Q9P0K7 980 aa11.52□□□□□ -0.57
UBFD1-203ENST00000564106 TLR2O60603 784 aa11.51□□□□□ -0.57
UBFD1-203ENST00000564106 ENTPD3O75355 529 aa11.51□□□□□ -0.57
UBFD1-203ENST00000564106 CD2BP2O95400 341 aaKnown RBP11.51□□□□□ -0.57
UBFD1-203ENST00000564106 MYCP01106 439 aaPredicted RBP11.51□□□□□ -0.57
UBFD1-203ENST00000564106 CYP2C8P10632 490 aa11.51□□□□□ -0.57
UBFD1-203ENST00000564106 CETPP11597 493 aa11.51□□□□□ -0.57
UBFD1-203ENST00000564106 PTPRAP18433 802 aa11.51□□□□□ -0.57
UBFD1-203ENST00000564106 SNAPC2Q13487 334 aa11.51□□□□□ -0.57
UBFD1-203ENST00000564106 C17orf99Q6UX52 265 aa11.51□□□□□ -0.57
UBFD1-203ENST00000564106 SCYL3Q8IZE3 742 aa11.51□□□□□ -0.57
UBFD1-203ENST00000564106 CHMP4CQ96CF2 233 aa11.51□□□□□ -0.57
UBFD1-203ENST00000564106 ERO1AQ96HE7 468 aa11.51□□□□□ -0.57
UBFD1-203ENST00000564106 INTS4Q96HW7 963 aaKnown RBP11.51□□□□□ -0.57
UBFD1-203ENST00000564106 ZSCAN31Q96LW9 406 aaPredicted RBP11.51□□□□□ -0.57
UBFD1-203ENST00000564106 TTC14Q96N46 770 aa11.51□□□□□ -0.57
UBFD1-203ENST00000564106 PUS7LQ9H0K6 701 aaKnown RBP11.51□□□□□ -0.57
UBFD1-203ENST00000564106 SLKQ9H2G2 1235 aaPredicted RBP11.51□□□□□ -0.57
UBFD1-203ENST00000564106 DNAJC18Q9H819 358 aa11.51□□□□□ -0.57
UBFD1-203ENST00000564106 ZFYVE28Q9HCC9 887 aa11.51□□□□□ -0.57
UBFD1-203ENST00000564106 SH2B1Q9NRF2 756 aaPredicted RBP11.51□□□□□ -0.57
UBFD1-203ENST00000564106 PDRG1Q9NUG6 133 aa11.51□□□□□ -0.57
UBFD1-203ENST00000564106 DDX60LQ5H9U9 1706 aaKnown RBP11.51□□□□□ -0.57
UBFD1-203ENST00000564106 DOCK3Q8IZD9 2030 aa11.5□□□□□ -0.57
UBFD1-203ENST00000564106 PDHXO00330 501 aa11.5□□□□□ -0.57
UBFD1-203ENST00000564106 ZNF213O14771 459 aa11.5□□□□□ -0.57
UBFD1-203ENST00000564106 CYP21A2P08686 494 aa11.5□□□□□ -0.57
UBFD1-203ENST00000564106 EN2P19622 333 aaPredicted RBP11.5□□□□□ -0.57
UBFD1-203ENST00000564106 RPS6KB1P23443 525 aa11.5□□□□□ -0.57
UBFD1-203ENST00000564106 DYNLL1P63167 89 aaKnown RBP11.5□□□□□ -0.57
UBFD1-203ENST00000564106 GSTO1P78417 241 aa11.5□□□□□ -0.57
UBFD1-203ENST00000564106 LACTBP83111 547 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms