RNA–Protein interactions for RNA: ENST00000563748.5

LPCAT4-205, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 1,357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-205ENST00000563748 CAP2P40123 477 aa19.27■□□□□ 0.68
LPCAT4-205ENST00000563748 PSMC4P43686 418 aa19.27■□□□□ 0.68
LPCAT4-205ENST00000563748 SLKQ9H2G2 1235 aaPredicted RBP19.27■□□□□ 0.68
LPCAT4-205ENST00000563748 STAP2Q9UGK3 403 aa19.27■□□□□ 0.68
LPCAT4-205ENST00000563748 SALL3Q9BXA9 1300 aa19.26■□□□□ 0.67
LPCAT4-205ENST00000563748 SDSP20132 328 aa19.26■□□□□ 0.67
LPCAT4-205ENST00000563748 PTMSP20962 102 aa19.26■□□□□ 0.67
LPCAT4-205ENST00000563748 PDE1AP54750 535 aa19.26■□□□□ 0.67
LPCAT4-205ENST00000563748 METTL16Q86W50 562 aaKnown RBP19.26■□□□□ 0.67
LPCAT4-205ENST00000563748 MAPKAPK5Q8IW41 473 aa19.26■□□□□ 0.67
LPCAT4-205ENST00000563748 RHPN1Q8TCX5 695 aa19.26■□□□□ 0.67
LPCAT4-205ENST00000563748 TGFBRAP1Q8WUH2 860 aa19.26■□□□□ 0.67
LPCAT4-205ENST00000563748 SRRDQ9UH36 339 aa19.26■□□□□ 0.67
LPCAT4-205ENST00000563748 AGTPBP1Q9UPW5 1226 aa19.26■□□□□ 0.67
LPCAT4-205ENST00000563748 BRCA2P51587 3418 aa19.25■□□□□ 0.67
LPCAT4-205ENST00000563748 IDH1O75874 414 aaKnown RBP19.25■□□□□ 0.67
LPCAT4-205ENST00000563748 OSBPP22059 807 aa19.25■□□□□ 0.67
LPCAT4-205ENST00000563748 CYP7A1P22680 504 aa19.25■□□□□ 0.67
LPCAT4-205ENST00000563748 DYNLL1P63167 89 aaKnown RBP19.25■□□□□ 0.67
LPCAT4-205ENST00000563748 PRPF38BQ5VTL8 546 aaKnown RBP19.25■□□□□ 0.67
LPCAT4-205ENST00000563748 KIF2CQ99661 725 aa19.25■□□□□ 0.67
LPCAT4-205ENST00000563748 IL1RAPL2Q9NP60 686 aa19.25■□□□□ 0.67
LPCAT4-205ENST00000563748 NDUFB9Q9Y6M9 179 aa19.25■□□□□ 0.67
LPCAT4-205ENST00000563748 MKI67P46013 3256 aaKnown RBP19.24■□□□□ 0.67
LPCAT4-205ENST00000563748 ECM2O94769 699 aaPredicted RBP19.24■□□□□ 0.67
LPCAT4-205ENST00000563748 FMNL1O95466 1100 aaPredicted RBP19.24■□□□□ 0.67
LPCAT4-205ENST00000563748 TMED8Q6PL24 325 aaPredicted RBP19.24■□□□□ 0.67
LPCAT4-205ENST00000563748 PROCA1Q8NCQ7 364 aaPredicted RBP19.24■□□□□ 0.67
LPCAT4-205ENST00000563748 ZNF280CQ8ND82 737 aa19.24■□□□□ 0.67
LPCAT4-205ENST00000563748 SH3TC2Q8TF17 1288 aa19.24■□□□□ 0.67
LPCAT4-205ENST00000563748 TMEM106CQ9BVX2 250 aa19.24■□□□□ 0.67
LPCAT4-205ENST00000563748 DNAJC18Q9H819 358 aa19.24■□□□□ 0.67
LPCAT4-205ENST00000563748 USP17L5A8MUK1 530 aa19.23■□□□□ 0.67
LPCAT4-205ENST00000563748 K7ELQ4 463 aaPredicted RBP19.23■□□□□ 0.67
LPCAT4-205ENST00000563748 EN2P19622 333 aaPredicted RBP19.23■□□□□ 0.67
LPCAT4-205ENST00000563748 HOXD10P28358 340 aa19.23■□□□□ 0.67
LPCAT4-205ENST00000563748 DDIT3P35638 169 aa19.23■□□□□ 0.67
LPCAT4-205ENST00000563748 FCGRTP55899 365 aa19.23■□□□□ 0.67
LPCAT4-205ENST00000563748 SPP2Q13103 211 aa19.23■□□□□ 0.67
LPCAT4-205ENST00000563748 DDX60LQ5H9U9 1706 aaKnown RBP19.23■□□□□ 0.67
LPCAT4-205ENST00000563748 TREML2Q5T2D2 321 aa19.23■□□□□ 0.67
LPCAT4-205ENST00000563748 CERS3Q8IU89 383 aa19.23■□□□□ 0.67
LPCAT4-205ENST00000563748 FOXP4Q8IVH2 680 aaPredicted RBP19.23■□□□□ 0.67
LPCAT4-205ENST00000563748 MAGEB6Q8N7X4 407 aa19.23■□□□□ 0.67
LPCAT4-205ENST00000563748 KIF1BPQ96EK5 621 aa19.23■□□□□ 0.67
LPCAT4-205ENST00000563748 PALD1Q9ULE6 856 aa19.23■□□□□ 0.67
LPCAT4-205ENST00000563748 ERC2O15083 957 aa19.22■□□□□ 0.67
LPCAT4-205ENST00000563748 MAP3K12Q12852 859 aa19.22■□□□□ 0.67
LPCAT4-205ENST00000563748 MIGA1Q8NAN2 632 aa19.22■□□□□ 0.67
LPCAT4-205ENST00000563748 USP26Q9BXU7 913 aa19.22■□□□□ 0.67
LPCAT4-205ENST00000563748 MYPNQ86TC9 1320 aa19.22■□□□□ 0.67
LPCAT4-205ENST00000563748 MX1P20591 662 aa19.21■□□□□ 0.67
LPCAT4-205ENST00000563748 SH3D19Q5HYK7 790 aa19.21■□□□□ 0.67
LPCAT4-205ENST00000563748 CLASRPQ8N2M8 674 aaKnown RBP19.21■□□□□ 0.67
LPCAT4-205ENST00000563748 CRACR2BQ8N4Y2 399 aaPredicted RBP19.21■□□□□ 0.67
LPCAT4-205ENST00000563748 SMCR8Q8TEV9 937 aaPredicted RBP19.21■□□□□ 0.67
LPCAT4-205ENST00000563748 WDR18Q9BV38 432 aa19.21■□□□□ 0.67
LPCAT4-205ENST00000563748 AS3MTQ9HBK9 375 aa19.21■□□□□ 0.67
LPCAT4-205ENST00000563748 SAP30BPQ9UHR5 308 aaKnown RBP19.21■□□□□ 0.67
LPCAT4-205ENST00000563748 NAV1Q8NEY1 1877 aa19.21■□□□□ 0.67
LPCAT4-205ENST00000563748 DDX11L8A8MPP1 907 aa19.2■□□□□ 0.66
LPCAT4-205ENST00000563748 ASNSP08243 561 aa19.2■□□□□ 0.66
LPCAT4-205ENST00000563748 HMGCS2P54868 508 aa19.2■□□□□ 0.66
LPCAT4-205ENST00000563748 JAG1P78504 1218 aa19.2■□□□□ 0.66
LPCAT4-205ENST00000563748 SLC4A8Q2Y0W8 1093 aa19.2■□□□□ 0.66
LPCAT4-205ENST00000563748 RAET1EQ8TD07 263 aa19.2■□□□□ 0.66
LPCAT4-205ENST00000563748 GINM1Q9NU53 330 aa19.2■□□□□ 0.66
LPCAT4-205ENST00000563748 PNMA3Q9UL41 463 aa19.2■□□□□ 0.66
LPCAT4-205ENST00000563748 DOCK3Q8IZD9 2030 aa19.2■□□□□ 0.66
LPCAT4-205ENST00000563748 APBB1O00213 710 aa19.19■□□□□ 0.66
LPCAT4-205ENST00000563748 SMARCA5O60264 1052 aaPredicted RBP19.19■□□□□ 0.66
LPCAT4-205ENST00000563748 HLA-DOAP06340 250 aa19.19■□□□□ 0.66
LPCAT4-205ENST00000563748 PRKCZQ05513 592 aa19.19■□□□□ 0.66
LPCAT4-205ENST00000563748 TTF1Q15361 905 aaPredicted RBP19.19■□□□□ 0.66
LPCAT4-205ENST00000563748 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.19■□□□□ 0.66
LPCAT4-205ENST00000563748 TRIM34Q9BYJ4 488 aa19.19■□□□□ 0.66
LPCAT4-205ENST00000563748 MYCP01106 439 aaPredicted RBP19.19■□□□□ 0.66
LPCAT4-205ENST00000563748 GRK4P32298 578 aa19.19■□□□□ 0.66
LPCAT4-205ENST00000563748 PABPC4Q13310 644 aaKnown RBP eCLIP19.19■□□□□ 0.66
LPCAT4-205ENST00000563748 OTUD7AQ8TE49 926 aaPredicted RBP19.19■□□□□ 0.66
LPCAT4-205ENST00000563748 ZBTB21Q9ULJ3 1066 aa19.19■□□□□ 0.66
LPCAT4-205ENST00000563748 IFIT2P09913 472 aaKnown RBP19.18■□□□□ 0.66
LPCAT4-205ENST00000563748 MCCP23508 829 aa19.18■□□□□ 0.66
LPCAT4-205ENST00000563748 MCM4P33991 863 aa19.18■□□□□ 0.66
LPCAT4-205ENST00000563748 USP5P45974 858 aa19.18■□□□□ 0.66
LPCAT4-205ENST00000563748 MTMR2Q13614 643 aa19.18■□□□□ 0.66
LPCAT4-205ENST00000563748 FAM110CQ1W6H9 321 aa19.18■□□□□ 0.66
LPCAT4-205ENST00000563748 SHROOM1Q2M3G4 852 aaPredicted RBP19.18■□□□□ 0.66
LPCAT4-205ENST00000563748 ANKRD13CQ8N6S4 541 aa19.18■□□□□ 0.66
LPCAT4-205ENST00000563748 RIOK1Q9BRS2 568 aaKnown RBP19.18■□□□□ 0.66
LPCAT4-205ENST00000563748 GABRQQ9UN88 632 aa19.18■□□□□ 0.66
LPCAT4-205ENST00000563748 MYH7P12883 1935 aa19.17■□□□□ 0.66
LPCAT4-205ENST00000563748 ST18O60284 1047 aa19.17■□□□□ 0.66
LPCAT4-205ENST00000563748 GDF11O95390 407 aa19.17■□□□□ 0.66
LPCAT4-205ENST00000563748 SLC34A2O95436 690 aa19.17■□□□□ 0.66
LPCAT4-205ENST00000563748 PDE6AP16499 860 aa19.17■□□□□ 0.66
LPCAT4-205ENST00000563748 GCLCP48506 637 aaPredicted RBP19.17■□□□□ 0.66
LPCAT4-205ENST00000563748 BACE1P56817 501 aa19.17■□□□□ 0.66
LPCAT4-205ENST00000563748 ANAPC15P60006 121 aa19.17■□□□□ 0.66
LPCAT4-205ENST00000563748 MTFR1Q15390 333 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms