RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 ZSCAN26Q16670 478 aa13.43□□□□□ -0.26
ABCA3-203ENST00000563623 RRAGBQ5VZM2 374 aa13.43□□□□□ -0.26
ABCA3-203ENST00000563623 ANKRD20A12PQ8NF67 263 aa13.43□□□□□ -0.26
ABCA3-203ENST00000563623 ENOX1Q8TC92 643 aaKnown RBP13.43□□□□□ -0.26
ABCA3-203ENST00000563623 CTNND2Q9UQB3 1225 aa13.43□□□□□ -0.26
ABCA3-203ENST00000563623 CTAGE9A4FU28 777 aa13.43□□□□□ -0.26
ABCA3-203ENST00000563623 TXLNAP40222 546 aa13.43□□□□□ -0.26
ABCA3-203ENST00000563623 AKNAD1Q5T1N1 836 aa13.43□□□□□ -0.26
ABCA3-203ENST00000563623 KANK3Q6NY19 840 aa13.43□□□□□ -0.26
ABCA3-203ENST00000563623 GOLGA6L1Q8N7Z2 621 aa13.42□□□□□ -0.26
ABCA3-203ENST00000563623 STRBPQ96SI9 672 aaKnown RBP13.42□□□□□ -0.26
ABCA3-203ENST00000563623 KRT23Q9C075 422 aa13.42□□□□□ -0.26
ABCA3-203ENST00000563623 CWC15Q9P013 229 aaKnown RBP13.42□□□□□ -0.26
ABCA3-203ENST00000563623 AFDNP55196 1824 aaKnown RBP13.42□□□□□ -0.26
ABCA3-203ENST00000563623 CCDC196A0A1B0GTZ2 297 aa13.42□□□□□ -0.26
ABCA3-203ENST00000563623 FMNL1O95466 1100 aaPredicted RBP13.42□□□□□ -0.26
ABCA3-203ENST00000563623 PCCAP05165 728 aaPredicted RBP13.42□□□□□ -0.26
ABCA3-203ENST00000563623 CAPN2P17655 700 aa13.42□□□□□ -0.26
ABCA3-203ENST00000563623 PTPREP23469 700 aa13.42□□□□□ -0.26
ABCA3-203ENST00000563623 TOB1P50616 345 aaPredicted RBP13.42□□□□□ -0.26
ABCA3-203ENST00000563623 PLCD1P51178 756 aa13.42□□□□□ -0.26
ABCA3-203ENST00000563623 HLFQ16534 295 aa13.42□□□□□ -0.26
ABCA3-203ENST00000563623 SLC35F6Q8N357 371 aa13.42□□□□□ -0.26
ABCA3-203ENST00000563623 TTLL11Q8NHH1 800 aa13.42□□□□□ -0.26
ABCA3-203ENST00000563623 PCMTD1Q96MG8 357 aaPredicted RBP13.42□□□□□ -0.26
ABCA3-203ENST00000563623 SLF1Q9BQI6 1058 aa13.42□□□□□ -0.26
ABCA3-203ENST00000563623 MRC1P22897 1456 aa13.42□□□□□ -0.26
ABCA3-203ENST00000563623 STARD3NLO95772 234 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 FAM193AP78312 1265 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 TSR1Q2NL82 804 aaKnown RBP13.41□□□□□ -0.26
ABCA3-203ENST00000563623 RAD9BQ6WBX8 426 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 TMEM139Q8IV31 216 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 FBXL16Q8N461 479 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 SUGCTQ9HAC7 445 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 FAM53CQ9NYF3 392 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 TAB2Q9NYJ8 693 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 FBXO2Q9UK22 296 aaPredicted RBP13.41□□□□□ -0.26
ABCA3-203ENST00000563623 GUCA1BQ9UMX6 200 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 MARF1Q9Y4F3 1742 aaKnown RBP13.41□□□□□ -0.26
ABCA3-203ENST00000563623 EIF3JO75822 258 aaKnown RBP13.41□□□□□ -0.26
ABCA3-203ENST00000563623 NTRK3Q16288 839 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 ZBTB38Q8NAP3 1195 aaPredicted RBP13.41□□□□□ -0.26
ABCA3-203ENST00000563623 ISCA1Q9BUE6 129 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.41□□□□□ -0.26
ABCA3-203ENST00000563623 FAM217BQ9NTX9 383 aaPredicted RBP13.41□□□□□ -0.26
ABCA3-203ENST00000563623 ASAP1Q9ULH1 1129 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 LAMA4Q16363 1823 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 DEXIO95424 95 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 UQCRFS1P1P0C7P4 283 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 CDC25AP30304 524 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 UBE3CQ15386 1083 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 SLC4A8Q2Y0W8 1093 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 SRGAP1Q7Z6B7 1085 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 CNNM2Q9H8M5 875 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 V9GY48 417 aaPredicted RBP13.41□□□□□ -0.26
ABCA3-203ENST00000563623 PCDH11XQ9BZA7 1347 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 PCDH11YQ9BZA8 1340 aa13.41□□□□□ -0.26
ABCA3-203ENST00000563623 CTAGE15A4D2H0 777 aa13.4□□□□□ -0.26
ABCA3-203ENST00000563623 CTAGE8P0CG41 777 aa13.4□□□□□ -0.26
ABCA3-203ENST00000563623 SLC5A1P13866 664 aa13.4□□□□□ -0.26
ABCA3-203ENST00000563623 IFNAR1P17181 557 aa13.4□□□□□ -0.26
ABCA3-203ENST00000563623 CTAGE6Q86UF2 777 aa13.4□□□□□ -0.26
ABCA3-203ENST00000563623 CTAGE4Q8IX94 777 aa13.4□□□□□ -0.26
ABCA3-203ENST00000563623 ZNF654Q8IZM8 581 aa13.4□□□□□ -0.26
ABCA3-203ENST00000563623 CEP112Q8N8E3 955 aa13.4□□□□□ -0.26
ABCA3-203ENST00000563623 GDAP1L1Q96MZ0 367 aa13.4□□□□□ -0.26
ABCA3-203ENST00000563623 BRMS1Q9HCU9 246 aa13.4□□□□□ -0.26
ABCA3-203ENST00000563623 ADAM21Q9UKJ8 722 aa13.4□□□□□ -0.26
ABCA3-203ENST00000563623 MYO1BO43795 1136 aa13.4□□□□□ -0.26
ABCA3-203ENST00000563623 PDE8BO95263 885 aa13.4□□□□□ -0.26
ABCA3-203ENST00000563623 GTF2A1P52655 376 aaPredicted RBP13.4□□□□□ -0.26
ABCA3-203ENST00000563623 SPATA5Q8NB90 893 aa13.4□□□□□ -0.26
ABCA3-203ENST00000563623 SEC31BQ9NQW1 1179 aa13.4□□□□□ -0.26
ABCA3-203ENST00000563623 ADGRG1Q9Y653 693 aa13.4□□□□□ -0.26
ABCA3-203ENST00000563623 RAD51AP2Q09MP3 1159 aa13.4□□□□□ -0.26
ABCA3-203ENST00000563623 MORC3Q14149 939 aa13.4□□□□□ -0.26
ABCA3-203ENST00000563623 SDR42E1Q8WUS8 393 aa13.4□□□□□ -0.26
ABCA3-203ENST00000563623 HINFPQ9BQA5 517 aa13.4□□□□□ -0.26
ABCA3-203ENST00000563623 TEX13AQ9BXU3 409 aaPredicted RBP13.4□□□□□ -0.26
ABCA3-203ENST00000563623 RIPOR2Q9Y4F9 1068 aa13.4□□□□□ -0.26
ABCA3-203ENST00000563623 LOC102724159A0A0B4J2E5 919 aa13.39□□□□□ -0.27
ABCA3-203ENST00000563623 CLGNO14967 610 aa13.39□□□□□ -0.27
ABCA3-203ENST00000563623 CYP7A1P22680 504 aa13.39□□□□□ -0.27
ABCA3-203ENST00000563623 CTSWP56202 376 aa13.39□□□□□ -0.27
ABCA3-203ENST00000563623 PWP2Q15269 919 aaKnown RBP13.39□□□□□ -0.27
ABCA3-203ENST00000563623 SPATA1Q5VX52 437 aa13.39□□□□□ -0.27
ABCA3-203ENST00000563623 FANCBQ8NB91 859 aa13.39□□□□□ -0.27
ABCA3-203ENST00000563623 CAGE1Q8TC20 777 aa13.39□□□□□ -0.27
ABCA3-203ENST00000563623 SYMPKQ92797 1274 aaKnown RBP13.39□□□□□ -0.27
ABCA3-203ENST00000563623 CAPZA3Q96KX2 299 aa13.39□□□□□ -0.27
ABCA3-203ENST00000563623 EPB41L4AQ9HCS5 686 aaPredicted RBP13.39□□□□□ -0.27
ABCA3-203ENST00000563623 CDC23Q9UJX2 597 aa13.39□□□□□ -0.27
ABCA3-203ENST00000563623 HDXQ7Z353 690 aa13.39□□□□□ -0.27
ABCA3-203ENST00000563623 LCORLQ8N3X6 602 aa13.39□□□□□ -0.27
ABCA3-203ENST00000563623 EEF2KMTQ96G04 330 aa13.39□□□□□ -0.27
ABCA3-203ENST00000563623 FUT8Q9BYC5 575 aa13.39□□□□□ -0.27
ABCA3-203ENST00000563623 TBX2Q13207 712 aaPredicted RBP13.39□□□□□ -0.27
ABCA3-203ENST00000563623 PLIN2Q99541 437 aa13.39□□□□□ -0.27
ABCA3-203ENST00000563623 ABCB6Q9NP58 842 aa13.39□□□□□ -0.27
ABCA3-203ENST00000563623 WDR19Q8NEZ3 1342 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms