RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 EAF2Q96CJ1 260 aaPredicted RBP20.58■□□□□ 0.89
HDGFL3-203ENST00000563404 CRISPLD2Q9H0B8 497 aa20.58■□□□□ 0.89
HDGFL3-203ENST00000563404 PRO3102Q9H379 93 aa20.58■□□□□ 0.89
HDGFL3-203ENST00000563404 SAP30BPQ9UHR5 308 aaKnown RBP20.58■□□□□ 0.89
HDGFL3-203ENST00000563404 ASNSP08243 561 aa20.57■□□□□ 0.88
HDGFL3-203ENST00000563404 FOXP4Q8IVH2 680 aaPredicted RBP20.57■□□□□ 0.88
HDGFL3-203ENST00000563404 P2RX7Q99572 595 aaKnown RBP20.57■□□□□ 0.88
HDGFL3-203ENST00000563404 MORF4L1Q9UBU8 362 aa20.57■□□□□ 0.88
HDGFL3-203ENST00000563404 NDUFB9Q9Y6M9 179 aa20.57■□□□□ 0.88
HDGFL3-203ENST00000563404 PLXNB2O15031 1838 aa20.57■□□□□ 0.88
HDGFL3-203ENST00000563404 ITPRIPQ8IWB1 547 aa20.56■□□□□ 0.88
HDGFL3-203ENST00000563404 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.56■□□□□ 0.88
HDGFL3-203ENST00000563404 TXNRD2Q9NNW7 524 aa20.56■□□□□ 0.88
HDGFL3-203ENST00000563404 CYP7A1P22680 504 aa20.55■□□□□ 0.88
HDGFL3-203ENST00000563404 HOXA7P31268 230 aaPredicted RBP20.55■□□□□ 0.88
HDGFL3-203ENST00000563404 POTEEQ6S8J3 1075 aa20.55■□□□□ 0.88
HDGFL3-203ENST00000563404 FTSJ3Q8IY81 847 aaKnown RBP20.55■□□□□ 0.88
HDGFL3-203ENST00000563404 CRACR2BQ8N4Y2 399 aaPredicted RBP20.55■□□□□ 0.88
HDGFL3-203ENST00000563404 DIS3LQ8TF46 1054 aaKnown RBP20.55■□□□□ 0.88
HDGFL3-203ENST00000563404 ZBTB21Q9ULJ3 1066 aa20.55■□□□□ 0.88
HDGFL3-203ENST00000563404 IGSF3O75054 1194 aa20.54■□□□□ 0.88
HDGFL3-203ENST00000563404 HMGCRP04035 888 aa20.54■□□□□ 0.88
HDGFL3-203ENST00000563404 IRX3P78415 501 aaPredicted RBP20.54■□□□□ 0.88
HDGFL3-203ENST00000563404 MIGA1Q8NAN2 632 aa20.54■□□□□ 0.88
HDGFL3-203ENST00000563404 PAWRQ96IZ0 340 aaKnown RBP20.54■□□□□ 0.88
HDGFL3-203ENST00000563404 ANTXR1Q9H6X2 564 aa20.54■□□□□ 0.88
HDGFL3-203ENST00000563404 TMOD4Q9NZQ9 345 aa20.54■□□□□ 0.88
HDGFL3-203ENST00000563404 NR2E3Q9Y5X4 410 aa20.54■□□□□ 0.88
HDGFL3-203ENST00000563404 C19orf81C9J6K1 198 aa20.53■□□□□ 0.88
HDGFL3-203ENST00000563404 USP17L10C9JJH3 530 aa20.53■□□□□ 0.88
HDGFL3-203ENST00000563404 IDH1O75874 414 aaKnown RBP20.53■□□□□ 0.88
HDGFL3-203ENST00000563404 HERVK_113P62684 666 aa20.53■□□□□ 0.88
HDGFL3-203ENST00000563404 HNRNPUQ00839 825 aaKnown RBP eCLIP20.53■□□□□ 0.88
HDGFL3-203ENST00000563404 DIEXFQ68CQ4 756 aaKnown RBP20.53■□□□□ 0.88
HDGFL3-203ENST00000563404 CEP85Q6P2H3 762 aa20.53■□□□□ 0.88
HDGFL3-203ENST00000563404 TRIB2Q92519 343 aa20.53■□□□□ 0.88
HDGFL3-203ENST00000563404 TRIM34Q9BYJ4 488 aa20.53■□□□□ 0.88
HDGFL3-203ENST00000563404 EMILIN3Q9NT22 766 aa20.53■□□□□ 0.88
HDGFL3-203ENST00000563404 GINM1Q9NU53 330 aa20.53■□□□□ 0.88
HDGFL3-203ENST00000563404 RBPJLQ9UBG7 517 aa20.53■□□□□ 0.88
HDGFL3-203ENST00000563404 CAPN2P17655 700 aa20.52■□□□□ 0.88
HDGFL3-203ENST00000563404 MNX1P50219 401 aaPredicted RBP20.52■□□□□ 0.88
HDGFL3-203ENST00000563404 Q3C1V9 767 aa20.52■□□□□ 0.88
HDGFL3-203ENST00000563404 ALPK3Q96L96 1907 aa20.52■□□□□ 0.88
HDGFL3-203ENST00000563404 EVI5O60447 810 aa20.51■□□□□ 0.87
HDGFL3-203ENST00000563404 GH2P01242 217 aa20.51■□□□□ 0.87
HDGFL3-203ENST00000563404 HLA-DOAP06340 250 aa20.51■□□□□ 0.87
HDGFL3-203ENST00000563404 CYP2B6P20813 491 aa20.51■□□□□ 0.87
HDGFL3-203ENST00000563404 TATDN1Q6P1N9 297 aa20.51■□□□□ 0.87
HDGFL3-203ENST00000563404 MAGEB6Q8N7X4 407 aa20.51■□□□□ 0.87
HDGFL3-203ENST00000563404 GPRC5AQ8NFJ5 357 aa20.51■□□□□ 0.87
HDGFL3-203ENST00000563404 EXOC6BQ9Y2D4 811 aa20.51■□□□□ 0.87
HDGFL3-203ENST00000563404 RPTORQ8N122 1335 aa20.51■□□□□ 0.87
HDGFL3-203ENST00000563404 HMX1Q9NP08 348 aaPredicted RBP20.5■□□□□ 0.87
HDGFL3-203ENST00000563404 MYH1P12882 1939 aa20.49■□□□□ 0.87
HDGFL3-203ENST00000563404 USP5P45974 858 aa20.49■□□□□ 0.87
HDGFL3-203ENST00000563404 MAP3K21Q5TCX8 1036 aa20.49■□□□□ 0.87
HDGFL3-203ENST00000563404 NECAB2Q7Z6G3 386 aa20.49■□□□□ 0.87
HDGFL3-203ENST00000563404 MIER1Q8N108 512 aa20.49■□□□□ 0.87
HDGFL3-203ENST00000563404 PANK1Q8TE04 598 aa20.49■□□□□ 0.87
HDGFL3-203ENST00000563404 USP6NLQ92738 828 aa20.49■□□□□ 0.87
HDGFL3-203ENST00000563404 PORCNQ9H237 461 aa20.49■□□□□ 0.87
HDGFL3-203ENST00000563404 LAMA3Q16787 3333 aa20.48■□□□□ 0.87
HDGFL3-203ENST00000563404 ERVK-9P63128 1117 aa20.48■□□□□ 0.87
HDGFL3-203ENST00000563404 ERVK-24P63145 666 aa20.48■□□□□ 0.87
HDGFL3-203ENST00000563404 USP17L2Q6R6M4 530 aa20.48■□□□□ 0.87
HDGFL3-203ENST00000563404 AACSQ86V21 672 aa20.48■□□□□ 0.87
HDGFL3-203ENST00000563404 ANKLE1Q8NAG6 615 aa20.48■□□□□ 0.87
HDGFL3-203ENST00000563404 CNMDO75829 334 aa20.47■□□□□ 0.87
HDGFL3-203ENST00000563404 ZYXQ15942 572 aaKnown RBP20.47■□□□□ 0.87
HDGFL3-203ENST00000563404 C12orf42Q96LP6 360 aa20.47■□□□□ 0.87
HDGFL3-203ENST00000563404 NUDT12Q9BQG2 462 aa20.47■□□□□ 0.87
HDGFL3-203ENST00000563404 RIOK1Q9BRS2 568 aaKnown RBP20.47■□□□□ 0.87
HDGFL3-203ENST00000563404 PAGR1Q9BTK6 254 aa20.47■□□□□ 0.87
HDGFL3-203ENST00000563404 EHD4Q9H223 541 aa20.47■□□□□ 0.87
HDGFL3-203ENST00000563404 STAP2Q9UGK3 403 aa20.47■□□□□ 0.87
HDGFL3-203ENST00000563404 SERPINB13Q9UIV8 391 aa20.47■□□□□ 0.87
HDGFL3-203ENST00000563404 XRCC5P13010 732 aaKnown RBP20.46■□□□□ 0.87
HDGFL3-203ENST00000563404 PRKAR2AP13861 404 aaKnown RBP20.46■□□□□ 0.87
HDGFL3-203ENST00000563404 MAPK4P31152 587 aa20.46■□□□□ 0.87
HDGFL3-203ENST00000563404 PLCD1P51178 756 aa20.46■□□□□ 0.87
HDGFL3-203ENST00000563404 EVX2Q03828 476 aa20.46■□□□□ 0.87
HDGFL3-203ENST00000563404 MAP3K12Q12852 859 aa20.46■□□□□ 0.87
HDGFL3-203ENST00000563404 MORN1Q5T089 497 aa20.46■□□□□ 0.87
HDGFL3-203ENST00000563404 GPR142Q7Z601 462 aa20.46■□□□□ 0.87
HDGFL3-203ENST00000563404 ACER1Q8TDN7 264 aa20.46■□□□□ 0.87
HDGFL3-203ENST00000563404 SOCS4Q8WXH5 440 aa20.46■□□□□ 0.87
HDGFL3-203ENST00000563404 IL1RAPL2Q9NP60 686 aa20.46■□□□□ 0.87
HDGFL3-203ENST00000563404 OGDHLQ9ULD0 1010 aa20.46■□□□□ 0.87
HDGFL3-203ENST00000563404 DDX60LQ5H9U9 1706 aaKnown RBP20.45■□□□□ 0.86
HDGFL3-203ENST00000563404 SHMT1P34896 483 aa20.45■□□□□ 0.86
HDGFL3-203ENST00000563404 CACNB2Q08289 660 aaPredicted RBP20.45■□□□□ 0.86
HDGFL3-203ENST00000563404 CCL14Q16627 93 aa20.45■□□□□ 0.86
HDGFL3-203ENST00000563404 CERS3Q8IU89 383 aa20.45■□□□□ 0.86
HDGFL3-203ENST00000563404 ERC1Q8IUD2 1116 aa20.45■□□□□ 0.86
HDGFL3-203ENST00000563404 SOX1O00570 391 aaPredicted RBP20.44■□□□□ 0.86
HDGFL3-203ENST00000563404 GUCY1A2P33402 732 aa20.44■□□□□ 0.86
HDGFL3-203ENST00000563404 RAB3GAP1Q15042 981 aa20.44■□□□□ 0.86
HDGFL3-203ENST00000563404 CERKLQ49MI3 558 aaPredicted RBP20.44■□□□□ 0.86
HDGFL3-203ENST00000563404 PLEKHH3Q7Z736 793 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms