RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 TMEM57Q8N5G2 664 aa12.5□□□□□ -0.41
SNX29-202ENST00000563308 ANKRD13CQ8N6S4 541 aa12.5□□□□□ -0.41
SNX29-202ENST00000563308 FAM151AQ8WW52 585 aa12.5□□□□□ -0.41
SNX29-202ENST00000563308 XAGE2Q96GT9 111 aa12.5□□□□□ -0.41
SNX29-202ENST00000563308 FAM198AQ9UFP1 575 aa12.5□□□□□ -0.41
SNX29-202ENST00000563308 PDS5AQ29RF7 1337 aaKnown RBP12.5□□□□□ -0.41
SNX29-202ENST00000563308 LTBP2Q14767 1821 aa12.5□□□□□ -0.41
SNX29-202ENST00000563308 MAST2Q6P0Q8 1798 aa12.49□□□□□ -0.41
SNX29-202ENST00000563308 GAKO14976 1311 aa12.49□□□□□ -0.41
SNX29-202ENST00000563308 ZFPM1Q8IX07 1006 aa12.49□□□□□ -0.41
SNX29-202ENST00000563308 ZNF384Q8TF68 577 aa12.49□□□□□ -0.41
SNX29-202ENST00000563308 ZNF112Q9UJU3 913 aa12.49□□□□□ -0.41
SNX29-202ENST00000563308 RFX7Q2KHR2 1363 aa12.48□□□□□ -0.41
SNX29-202ENST00000563308 ATRNL1Q5VV63 1379 aa12.48□□□□□ -0.41
SNX29-202ENST00000563308 RLBP1P12271 317 aa12.48□□□□□ -0.41
SNX29-202ENST00000563308 TCP10Q12799 353 aa12.48□□□□□ -0.41
SNX29-202ENST00000563308 ZKSCAN2Q63HK3 967 aa12.48□□□□□ -0.41
SNX29-202ENST00000563308 MIGA2Q7L4E1 593 aa12.48□□□□□ -0.41
SNX29-202ENST00000563308 FAM163AQ96GL9 167 aaPredicted RBP12.48□□□□□ -0.41
SNX29-202ENST00000563308 USP40Q9NVE5 1235 aa12.48□□□□□ -0.41
SNX29-202ENST00000563308 PNMA3Q9UL41 463 aa12.48□□□□□ -0.41
SNX29-202ENST00000563308 AKAP2Q9Y2D5 859 aa12.48□□□□□ -0.41
SNX29-202ENST00000563308 SLC45A1Q9Y2W3 748 aa12.48□□□□□ -0.41
SNX29-202ENST00000563308 MYO9BQ13459 2157 aa12.47□□□□□ -0.41
SNX29-202ENST00000563308 MYH13Q9UKX3 1938 aa12.47□□□□□ -0.41
SNX29-202ENST00000563308 ERC2O15083 957 aa12.47□□□□□ -0.41
SNX29-202ENST00000563308 ALADP13716 330 aa12.47□□□□□ -0.41
SNX29-202ENST00000563308 ZKSCAN1P17029 563 aaPredicted RBP12.47□□□□□ -0.41
SNX29-202ENST00000563308 CYP2B6P20813 491 aa12.47□□□□□ -0.41
SNX29-202ENST00000563308 INPP5BP32019 993 aa12.47□□□□□ -0.41
SNX29-202ENST00000563308 POLA2Q14181 598 aa12.47□□□□□ -0.41
SNX29-202ENST00000563308 FAM110CQ1W6H9 321 aa12.47□□□□□ -0.41
SNX29-202ENST00000563308 GPAT2Q6NUI2 795 aa12.47□□□□□ -0.41
SNX29-202ENST00000563308 PI16Q6UXB8 463 aa12.47□□□□□ -0.41
SNX29-202ENST00000563308 HERVK_113Q902F9 699 aa12.47□□□□□ -0.41
SNX29-202ENST00000563308 TRIB2Q92519 343 aa12.47□□□□□ -0.41
SNX29-202ENST00000563308 IDI2Q9BXS1 227 aa12.47□□□□□ -0.41
SNX29-202ENST00000563308 HMG20BQ9P0W2 317 aa12.47□□□□□ -0.41
SNX29-202ENST00000563308 MSRAQ9UJ68 235 aa12.47□□□□□ -0.41
SNX29-202ENST00000563308 DOCK3Q8IZD9 2030 aa12.47□□□□□ -0.41
SNX29-202ENST00000563308 CACNA1GO43497 2377 aa12.46□□□□□ -0.41
SNX29-202ENST00000563308 ZDBF2Q9HCK1 2354 aa12.46□□□□□ -0.41
SNX29-202ENST00000563308 MVPQ14764 893 aaKnown RBP12.46□□□□□ -0.41
SNX29-202ENST00000563308 MAP3K21Q5TCX8 1036 aa12.46□□□□□ -0.41
SNX29-202ENST00000563308 SH3BP5LQ7L8J4 393 aa12.46□□□□□ -0.41
SNX29-202ENST00000563308 ERMP1Q7Z2K6 904 aa12.46□□□□□ -0.41
SNX29-202ENST00000563308 SSH3Q8TE77 659 aa12.46□□□□□ -0.41
SNX29-202ENST00000563308 COG5Q9UP83 839 aa12.46□□□□□ -0.41
SNX29-202ENST00000563308 ITGB8P26012 769 aa12.45□□□□□ -0.42
SNX29-202ENST00000563308 ARID4AP29374 1257 aaPredicted RBP12.45□□□□□ -0.42
SNX29-202ENST00000563308 RGS3P49796 1198 aa12.45□□□□□ -0.42
SNX29-202ENST00000563308 ATP8B2P98198 1209 aa12.45□□□□□ -0.42
SNX29-202ENST00000563308 MECOMQ03112 1051 aa12.45□□□□□ -0.42
SNX29-202ENST00000563308 FPGSQ05932 587 aa12.45□□□□□ -0.42
SNX29-202ENST00000563308 MOGSQ13724 837 aa12.45□□□□□ -0.42
SNX29-202ENST00000563308 CCDC174Q6PII3 467 aa12.45□□□□□ -0.42
SNX29-202ENST00000563308 TBC1D9Q6ZT07 1266 aa12.45□□□□□ -0.42
SNX29-202ENST00000563308 ZGPATQ8N5A5 531 aaKnown RBP12.45□□□□□ -0.42
SNX29-202ENST00000563308 NEUROD6Q96NK8 337 aa12.45□□□□□ -0.42
SNX29-202ENST00000563308 NUDT12Q9BQG2 462 aa12.45□□□□□ -0.42
SNX29-202ENST00000563308 DDX4Q9NQI0 724 aaKnown RBP12.45□□□□□ -0.42
SNX29-202ENST00000563308 ABCF2Q9UG63 623 aa12.45□□□□□ -0.42
SNX29-202ENST00000563308 ZBED9Q6R2W3 1325 aa12.44□□□□□ -0.42
SNX29-202ENST00000563308 GPR75-ASB3A0A0A6YYF3 556 aa12.44□□□□□ -0.42
SNX29-202ENST00000563308 PHF20L1A8MW92 1017 aa12.44□□□□□ -0.42
SNX29-202ENST00000563308 DNM1LO00429 736 aa12.44□□□□□ -0.42
SNX29-202ENST00000563308 MSCO60682 206 aa12.44□□□□□ -0.42
SNX29-202ENST00000563308 ENTPD3O75355 529 aa12.44□□□□□ -0.42
SNX29-202ENST00000563308 SLURP2P0DP57 97 aa12.44□□□□□ -0.42
SNX29-202ENST00000563308 RAG1P15918 1043 aa12.44□□□□□ -0.42
SNX29-202ENST00000563308 MCAMP43121 646 aa12.44□□□□□ -0.42
SNX29-202ENST00000563308 RHBDL3P58872 404 aa12.44□□□□□ -0.42
SNX29-202ENST00000563308 MAP3K10Q02779 954 aa12.44□□□□□ -0.42
SNX29-202ENST00000563308 CACNB2Q08289 660 aaPredicted RBP12.44□□□□□ -0.42
SNX29-202ENST00000563308 G3BP1Q13283 466 aaKnown RBP eCLIP12.44□□□□□ -0.42
SNX29-202ENST00000563308 ADGRE1Q14246 886 aa12.44□□□□□ -0.42
SNX29-202ENST00000563308 NOL9Q5SY16 702 aaKnown RBP12.44□□□□□ -0.42
SNX29-202ENST00000563308 SPTY2D1Q68D10 685 aaPredicted RBP12.44□□□□□ -0.42
SNX29-202ENST00000563308 LHX8Q68G74 356 aa12.44□□□□□ -0.42
SNX29-202ENST00000563308 DZIP1Q86YF9 867 aaKnown RBP12.44□□□□□ -0.42
SNX29-202ENST00000563308 CCAR1Q8IX12 1150 aaKnown RBP12.44□□□□□ -0.42
SNX29-202ENST00000563308 SPATA5Q8NB90 893 aa12.44□□□□□ -0.42
SNX29-202ENST00000563308 C1orf115Q9H7X2 142 aa12.44□□□□□ -0.42
SNX29-202ENST00000563308 SLC28A3Q9HAS3 691 aa12.44□□□□□ -0.42
SNX29-202ENST00000563308 PICK1Q9NRD5 415 aa12.44□□□□□ -0.42
SNX29-202ENST00000563308 MROH7-TTC4A0A0A0MT08 1334 aa12.43□□□□□ -0.42
SNX29-202ENST00000563308 DDTLA6NHG4 134 aaPredicted RBP12.43□□□□□ -0.42
SNX29-202ENST00000563308 KBTBD13C9JR72 458 aa12.43□□□□□ -0.42
SNX29-202ENST00000563308 GTPBP6O43824 516 aaPredicted RBP12.43□□□□□ -0.42
SNX29-202ENST00000563308 CCND3P30281 292 aaPredicted RBP12.43□□□□□ -0.42
SNX29-202ENST00000563308 BTDP43251 543 aa12.43□□□□□ -0.42
SNX29-202ENST00000563308 GCLCP48506 637 aaPredicted RBP12.43□□□□□ -0.42
SNX29-202ENST00000563308 RAB30Q15771 203 aa12.43□□□□□ -0.42
SNX29-202ENST00000563308 SLC39A5Q6ZMH5 540 aa12.43□□□□□ -0.42
SNX29-202ENST00000563308 SOCS4Q8WXH5 440 aa12.43□□□□□ -0.42
SNX29-202ENST00000563308 KHSRPQ92945 711 aaKnown RBP eCLIP12.43□□□□□ -0.42
SNX29-202ENST00000563308 NSUN4Q96CB9 384 aaKnown RBP12.43□□□□□ -0.42
SNX29-202ENST00000563308 GPR108Q9NPR9 543 aa12.43□□□□□ -0.42
SNX29-202ENST00000563308 GJD2Q9UKL4 321 aa12.43□□□□□ -0.42
SNX29-202ENST00000563308 NOP58Q9Y2X3 529 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms