RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 RC3H2Q9HBD1 1191 aaKnown RBP5.37□□□□□ -1.55
SHCBP1-202ENST00000563219 ADAMTS6Q9UKP5 1117 aa5.37□□□□□ -1.55
SHCBP1-202ENST00000563219 CARMIL2Q6F5E8 1435 aa5.37□□□□□ -1.55
SHCBP1-202ENST00000563219 EOMESO95936 686 aa5.36□□□□□ -1.55
SHCBP1-202ENST00000563219 HDLBPQ00341 1268 aaKnown RBP5.36□□□□□ -1.55
SHCBP1-202ENST00000563219 PTPN11Q06124 597 aaPredicted RBP5.36□□□□□ -1.55
SHCBP1-202ENST00000563219 INPP5AQ14642 412 aa5.36□□□□□ -1.55
SHCBP1-202ENST00000563219 CYFIP1Q7L576 1253 aa5.36□□□□□ -1.55
SHCBP1-202ENST00000563219 HS2ST1Q7LGA3 356 aa5.36□□□□□ -1.55
SHCBP1-202ENST00000563219 ASB11Q8WXH4 323 aa5.36□□□□□ -1.55
SHCBP1-202ENST00000563219 ELMO3Q96BJ8 720 aa5.36□□□□□ -1.55
SHCBP1-202ENST00000563219 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.36□□□□□ -1.55
SHCBP1-202ENST00000563219 LRIG2O94898 1065 aa5.35□□□□□ -1.55
SHCBP1-202ENST00000563219 LIG3P49916 1009 aa5.35□□□□□ -1.55
SHCBP1-202ENST00000563219 FZD5Q13467 585 aa5.35□□□□□ -1.55
SHCBP1-202ENST00000563219 PWP1Q13610 501 aa5.35□□□□□ -1.55
SHCBP1-202ENST00000563219 NKPD1Q17RQ9 610 aa5.35□□□□□ -1.55
SHCBP1-202ENST00000563219 ANGEL2Q5VTE6 544 aaKnown RBP5.35□□□□□ -1.55
SHCBP1-202ENST00000563219 TTBK2Q6IQ55 1244 aa5.35□□□□□ -1.55
SHCBP1-202ENST00000563219 SLC23A3Q6PIS1 610 aa5.35□□□□□ -1.55
SHCBP1-202ENST00000563219 AGMOQ6ZNB7 445 aa5.35□□□□□ -1.55
SHCBP1-202ENST00000563219 ARMCX6Q7L4S7 300 aa5.35□□□□□ -1.55
SHCBP1-202ENST00000563219 SPACA3Q8IXA5 215 aa5.35□□□□□ -1.55
SHCBP1-202ENST00000563219 LRRN4CLQ8ND94 238 aa5.35□□□□□ -1.55
SHCBP1-202ENST00000563219 GGT7Q9UJ14 662 aa5.35□□□□□ -1.55
SHCBP1-202ENST00000563219 C8AP07357 584 aa5.34□□□□□ -1.55
SHCBP1-202ENST00000563219 LRFN4Q6PJG9 635 aa5.34□□□□□ -1.55
SHCBP1-202ENST00000563219 HDXQ7Z353 690 aa5.34□□□□□ -1.55
SHCBP1-202ENST00000563219 RELL1Q8IUW5 271 aa5.34□□□□□ -1.55
SHCBP1-202ENST00000563219 PHC3Q8NDX5 983 aa5.34□□□□□ -1.55
SHCBP1-202ENST00000563219 RHOVQ96L33 236 aa5.34□□□□□ -1.55
SHCBP1-202ENST00000563219 TMEM74Q96NL1 305 aa5.34□□□□□ -1.55
SHCBP1-202ENST00000563219 SNCAIPQ9Y6H5 919 aa5.34□□□□□ -1.55
SHCBP1-202ENST00000563219 GNAT3A8MTJ3 354 aa5.33□□□□□ -1.56
SHCBP1-202ENST00000563219 SLITRK5O94991 958 aa5.33□□□□□ -1.56
SHCBP1-202ENST00000563219 CAP2P40123 477 aa5.33□□□□□ -1.56
SHCBP1-202ENST00000563219 SLBPQ14493 270 aaKnown RBP eCLIP5.33□□□□□ -1.56
SHCBP1-202ENST00000563219 TMEM40Q8WWA1 233 aa5.33□□□□□ -1.56
SHCBP1-202ENST00000563219 FAM168AQ92567 244 aa5.33□□□□□ -1.56
SHCBP1-202ENST00000563219 PLPPR2Q96GM1 343 aa5.33□□□□□ -1.56
SHCBP1-202ENST00000563219 FOXQ1Q9C009 403 aa5.33□□□□□ -1.56
SHCBP1-202ENST00000563219 WNT10AQ9GZT5 417 aa5.33□□□□□ -1.56
SHCBP1-202ENST00000563219 COPRSQ9NQ92 184 aa5.33□□□□□ -1.56
SHCBP1-202ENST00000563219 PRDM5Q9NQX1 630 aaPredicted RBP5.33□□□□□ -1.56
SHCBP1-202ENST00000563219 KCNQ5Q9NR82 932 aa5.33□□□□□ -1.56
SHCBP1-202ENST00000563219 KBTBD4Q9NVX7 518 aa5.33□□□□□ -1.56
SHCBP1-202ENST00000563219 MAPK8IP1Q9UQF2 711 aa5.33□□□□□ -1.56
SHCBP1-202ENST00000563219 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
SHCBP1-202ENST00000563219 PRAMEF27A3QJZ7 478 aa5.32□□□□□ -1.56
SHCBP1-202ENST00000563219 TFE3P19532 575 aaPredicted RBP5.32□□□□□ -1.56
SHCBP1-202ENST00000563219 CLCN7P51798 805 aa5.32□□□□□ -1.56
SHCBP1-202ENST00000563219 LMNB2Q03252 620 aa5.32□□□□□ -1.56
SHCBP1-202ENST00000563219 ZP2Q05996 745 aa5.32□□□□□ -1.56
SHCBP1-202ENST00000563219 RAD51AP2Q09MP3 1159 aa5.32□□□□□ -1.56
SHCBP1-202ENST00000563219 IKZF1Q13422 519 aa5.32□□□□□ -1.56
SHCBP1-202ENST00000563219 MAP3K11Q16584 847 aa5.32□□□□□ -1.56
SHCBP1-202ENST00000563219 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.32□□□□□ -1.56
SHCBP1-202ENST00000563219 CCDC84Q86UT8 332 aaPredicted RBP5.32□□□□□ -1.56
SHCBP1-202ENST00000563219 NT5DC4Q86YG4 428 aa5.32□□□□□ -1.56
SHCBP1-202ENST00000563219 MFSD2AQ8NA29 543 aa5.32□□□□□ -1.56
SHCBP1-202ENST00000563219 GAL3ST3Q96A11 431 aa5.32□□□□□ -1.56
SHCBP1-202ENST00000563219 FBRSQ9HAH7 460 aa5.32□□□□□ -1.56
SHCBP1-202ENST00000563219 PRDM7Q9NQW5 492 aa5.32□□□□□ -1.56
SHCBP1-202ENST00000563219 LMCD1Q9NZU5 365 aa5.32□□□□□ -1.56
SHCBP1-202ENST00000563219 DDX41Q9UJV9 622 aaKnown RBP5.32□□□□□ -1.56
SHCBP1-202ENST00000563219 TLR6Q9Y2C9 796 aa5.32□□□□□ -1.56
SHCBP1-202ENST00000563219 PITPNM2Q9BZ72 1349 aa5.31□□□□□ -1.56
SHCBP1-202ENST00000563219 CNTNAP4Q9C0A0 1308 aa5.31□□□□□ -1.56
SHCBP1-202ENST00000563219 GBP2P32456 591 aaPredicted RBP5.31□□□□□ -1.56
SHCBP1-202ENST00000563219 ETF1P62495 437 aaKnown RBP5.31□□□□□ -1.56
SHCBP1-202ENST00000563219 RACK1P63244 317 aaKnown RBP5.31□□□□□ -1.56
SHCBP1-202ENST00000563219 NKG7Q16617 165 aa5.31□□□□□ -1.56
SHCBP1-202ENST00000563219 ZNF394Q53GI3 561 aa5.31□□□□□ -1.56
SHCBP1-202ENST00000563219 USP48Q86UV5 1035 aa5.31□□□□□ -1.56
SHCBP1-202ENST00000563219 HID1Q8IV36 788 aa5.31□□□□□ -1.56
SHCBP1-202ENST00000563219 FLAD1Q8NFF5 587 aa5.31□□□□□ -1.56
SHCBP1-202ENST00000563219 TGIF2Q9GZN2 237 aa5.31□□□□□ -1.56
SHCBP1-202ENST00000563219 GFRA2O00451 464 aa5.3□□□□□ -1.56
SHCBP1-202ENST00000563219 PF4P02776 101 aa5.3□□□□□ -1.56
SHCBP1-202ENST00000563219 GARTP22102 1010 aa5.3□□□□□ -1.56
SHCBP1-202ENST00000563219 CDK8P49336 464 aa5.3□□□□□ -1.56
SHCBP1-202ENST00000563219 JAG1P78504 1218 aa5.3□□□□□ -1.56
SHCBP1-202ENST00000563219 CAMK2GQ13555 558 aaPredicted RBP5.3□□□□□ -1.56
SHCBP1-202ENST00000563219 WIPI1Q5MNZ9 446 aaPredicted RBP5.3□□□□□ -1.56
SHCBP1-202ENST00000563219 SFRP5Q5T4F7 317 aa5.3□□□□□ -1.56
SHCBP1-202ENST00000563219 ZNF648Q5T619 568 aaPredicted RBP5.3□□□□□ -1.56
SHCBP1-202ENST00000563219 C9orf131Q5VYM1 1079 aa5.3□□□□□ -1.56
SHCBP1-202ENST00000563219 C22orf34Q6ZV56 151 aa5.3□□□□□ -1.56
SHCBP1-202ENST00000563219 ZNF654Q8IZM8 581 aa5.3□□□□□ -1.56
SHCBP1-202ENST00000563219 RIN3Q8TB24 985 aa5.3□□□□□ -1.56
SHCBP1-202ENST00000563219 MIR1-1HGQ9H1L0 117 aa5.3□□□□□ -1.56
SHCBP1-202ENST00000563219 SEMA3GQ9NS98 782 aa5.3□□□□□ -1.56
SHCBP1-202ENST00000563219 TPX2Q9ULW0 747 aaKnown RBP5.3□□□□□ -1.56
SHCBP1-202ENST00000563219 PCDHB5Q9Y5E4 795 aa5.3□□□□□ -1.56
SHCBP1-202ENST00000563219 TACC3Q9Y6A5 838 aa5.3□□□□□ -1.56
SHCBP1-202ENST00000563219 PRR33A8MZF0 331 aa5.29□□□□□ -1.56
SHCBP1-202ENST00000563219 FAM155AB1AL88 458 aaPredicted RBP5.29□□□□□ -1.56
SHCBP1-202ENST00000563219 F6X3S4 739 aa5.29□□□□□ -1.56
SHCBP1-202ENST00000563219 FARP2O94887 1054 aaPredicted RBP5.29□□□□□ -1.56
SHCBP1-202ENST00000563219 ZNF865P0CJ78 1059 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms