RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 USP17L5A8MUK1 530 aa19.65■□□□□ 0.74
PKD1-226ENST00000562425 USP17L12C9JPN9 530 aa19.65■□□□□ 0.74
PKD1-226ENST00000562425 USP17L21D6R901 530 aa19.65■□□□□ 0.74
PKD1-226ENST00000562425 APPP05067 770 aa19.65■□□□□ 0.74
PKD1-226ENST00000562425 PDE4AP27815 886 aa19.65■□□□□ 0.74
PKD1-226ENST00000562425 C12orf60Q5U649 245 aa19.65■□□□□ 0.74
PKD1-226ENST00000562425 TATDN1Q6P1N9 297 aa19.65■□□□□ 0.74
PKD1-226ENST00000562425 BRI3BPQ8WY22 251 aa19.65■□□□□ 0.74
PKD1-226ENST00000562425 ARPP21Q9UBL0 812 aaPredicted RBP19.65■□□□□ 0.74
PKD1-226ENST00000562425 SWAP70Q9UH65 585 aa19.65■□□□□ 0.74
PKD1-226ENST00000562425 LAMB1P07942 1786 aa19.65■□□□□ 0.74
PKD1-226ENST00000562425 GSG1L2A8MUP6 293 aa19.64■□□□□ 0.73
PKD1-226ENST00000562425 PATL2C9JE40 543 aaKnown RBP19.64■□□□□ 0.73
PKD1-226ENST00000562425 HIP1O00291 1037 aa19.64■□□□□ 0.73
PKD1-226ENST00000562425 IGF2BP3O00425 579 aaKnown RBP eCLIP19.64■□□□□ 0.73
PKD1-226ENST00000562425 FKTNO75072 461 aa19.64■□□□□ 0.73
PKD1-226ENST00000562425 CCDC136Q96JN2 1154 aa19.64■□□□□ 0.73
PKD1-226ENST00000562425 SEC62Q99442 399 aaKnown RBP19.64■□□□□ 0.73
PKD1-226ENST00000562425 PTPN18Q99952 460 aa19.64■□□□□ 0.73
PKD1-226ENST00000562425 ZCCHC17Q9NP64 241 aaKnown RBP19.64■□□□□ 0.73
PKD1-226ENST00000562425 CABP5Q9NP86 173 aa19.64■□□□□ 0.73
PKD1-226ENST00000562425 AFG3L2Q9Y4W6 797 aa19.64■□□□□ 0.73
PKD1-226ENST00000562425 TDO2P48775 406 aa19.63■□□□□ 0.73
PKD1-226ENST00000562425 GABPAQ06546 454 aa19.63■□□□□ 0.73
PKD1-226ENST00000562425 RRP1BQ14684 758 aaKnown RBP19.63■□□□□ 0.73
PKD1-226ENST00000562425 CERKLQ49MI3 558 aaPredicted RBP19.63■□□□□ 0.73
PKD1-226ENST00000562425 SBK1Q52WX2 424 aa19.63■□□□□ 0.73
PKD1-226ENST00000562425 CTR9Q6PD62 1173 aa19.63■□□□□ 0.73
PKD1-226ENST00000562425 FASTKD5Q7L8L6 764 aaKnown RBP19.63■□□□□ 0.73
PKD1-226ENST00000562425 HTTP42858 3142 aa19.63■□□□□ 0.73
PKD1-226ENST00000562425 GDF11O95390 407 aa19.62■□□□□ 0.73
PKD1-226ENST00000562425 CYP2D6P10635 497 aa19.62■□□□□ 0.73
PKD1-226ENST00000562425 SDSP20132 328 aa19.62■□□□□ 0.73
PKD1-226ENST00000562425 MCMDC2Q4G0Z9 681 aa19.62■□□□□ 0.73
PKD1-226ENST00000562425 TTC22Q5TAA0 569 aa19.62■□□□□ 0.73
PKD1-226ENST00000562425 ZNF280CQ8ND82 737 aa19.62■□□□□ 0.73
PKD1-226ENST00000562425 ZBTB21Q9ULJ3 1066 aa19.62■□□□□ 0.73
PKD1-226ENST00000562425 NAV1Q8NEY1 1877 aa19.61■□□□□ 0.73
PKD1-226ENST00000562425 A0A0G2JLL6 359 aaPredicted RBP19.61■□□□□ 0.73
PKD1-226ENST00000562425 TRIM75PA6NK02 468 aa19.61■□□□□ 0.73
PKD1-226ENST00000562425 SHMT1P34896 483 aa19.61■□□□□ 0.73
PKD1-226ENST00000562425 MFAP1P55081 439 aaKnown RBP19.61■□□□□ 0.73
PKD1-226ENST00000562425 SPP2Q13103 211 aa19.61■□□□□ 0.73
PKD1-226ENST00000562425 ABCB5Q2M3G0 1257 aa19.61■□□□□ 0.73
PKD1-226ENST00000562425 PRRT2Q7Z6L0 340 aaPredicted RBP19.61■□□□□ 0.73
PKD1-226ENST00000562425 ANKRD23Q86SG2 305 aa19.61■□□□□ 0.73
PKD1-226ENST00000562425 IFNL3Q8IZI9 196 aa19.61■□□□□ 0.73
PKD1-226ENST00000562425 WDR18Q9BV38 432 aa19.61■□□□□ 0.73
PKD1-226ENST00000562425 DIAPH3Q9NSV4 1193 aa19.61■□□□□ 0.73
PKD1-226ENST00000562425 DOCK1Q14185 1865 aa19.6■□□□□ 0.73
PKD1-226ENST00000562425 SIPA1L1O43166 1804 aa19.6■□□□□ 0.73
PKD1-226ENST00000562425 GH2P01242 217 aa19.6■□□□□ 0.73
PKD1-226ENST00000562425 NMIQ13287 307 aaPredicted RBP19.6■□□□□ 0.73
PKD1-226ENST00000562425 TAF1CQ15572 869 aaPredicted RBP19.6■□□□□ 0.73
PKD1-226ENST00000562425 ERICH6BQ5W0A0 696 aa19.6■□□□□ 0.73
PKD1-226ENST00000562425 FAM43AQ8N2R8 423 aa19.6■□□□□ 0.73
PKD1-226ENST00000562425 DYNLL2Q96FJ2 89 aa19.6■□□□□ 0.73
PKD1-226ENST00000562425 CCDC17Q96LX7 622 aa19.6■□□□□ 0.73
PKD1-226ENST00000562425 NAPBQ9H115 298 aa19.6■□□□□ 0.73
PKD1-226ENST00000562425 ZFYVE28Q9HCC9 887 aa19.6■□□□□ 0.73
PKD1-226ENST00000562425 CYP2D7A0A087X1C5 515 aa19.59■□□□□ 0.73
PKD1-226ENST00000562425 MINDY4BA8MYZ0 360 aa19.59■□□□□ 0.73
PKD1-226ENST00000562425 BTBD19C9JJ37 291 aa19.59■□□□□ 0.73
PKD1-226ENST00000562425 CDK8P49336 464 aa19.59■□□□□ 0.73
PKD1-226ENST00000562425 C16orf86Q6ZW13 317 aa19.59■□□□□ 0.73
PKD1-226ENST00000562425 CCDC84Q86UT8 332 aaPredicted RBP19.59■□□□□ 0.73
PKD1-226ENST00000562425 FAM227BQ96M60 508 aa19.59■□□□□ 0.73
PKD1-226ENST00000562425 ZNF287Q9HBT7 754 aa19.59■□□□□ 0.73
PKD1-226ENST00000562425 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.59■□□□□ 0.73
PKD1-226ENST00000562425 A0A0D9SFI3 127 aa19.58■□□□□ 0.72
PKD1-226ENST00000562425 C19orf81C9J6K1 198 aa19.58■□□□□ 0.72
PKD1-226ENST00000562425 MPHOSPH10O00566 681 aaKnown RBP19.58■□□□□ 0.72
PKD1-226ENST00000562425 SLC3A2P08195 630 aaKnown RBP19.58■□□□□ 0.72
PKD1-226ENST00000562425 JAG1P78504 1218 aa19.58■□□□□ 0.72
PKD1-226ENST00000562425 CRHR2Q13324 411 aa19.58■□□□□ 0.72
PKD1-226ENST00000562425 GADL1Q6ZQY3 521 aa19.58■□□□□ 0.72
PKD1-226ENST00000562425 CCDC129Q6ZRS4 1044 aa19.58■□□□□ 0.72
PKD1-226ENST00000562425 EPB41L4AQ9HCS5 686 aaPredicted RBP19.58■□□□□ 0.72
PKD1-226ENST00000562425 DDX60LQ5H9U9 1706 aaKnown RBP19.58■□□□□ 0.72
PKD1-226ENST00000562425 USP17L10C9JJH3 530 aa19.57■□□□□ 0.72
PKD1-226ENST00000562425 PDHXO00330 501 aa19.57■□□□□ 0.72
PKD1-226ENST00000562425 BACE1P56817 501 aa19.57■□□□□ 0.72
PKD1-226ENST00000562425 EVX2Q03828 476 aa19.57■□□□□ 0.72
PKD1-226ENST00000562425 MOGSQ13724 837 aa19.57■□□□□ 0.72
PKD1-226ENST00000562425 RAB3GAP1Q15042 981 aa19.57■□□□□ 0.72
PKD1-226ENST00000562425 PROCA1Q8NCQ7 364 aaPredicted RBP19.57■□□□□ 0.72
PKD1-226ENST00000562425 MKNK2Q9HBH9 465 aa19.57■□□□□ 0.72
PKD1-226ENST00000562425 TMOD4Q9NZQ9 345 aa19.57■□□□□ 0.72
PKD1-226ENST00000562425 KIAA0100Q14667 2235 aaKnown RBP19.56■□□□□ 0.72
PKD1-226ENST00000562425 GSPT1P15170 499 aaKnown RBP19.56■□□□□ 0.72
PKD1-226ENST00000562425 PABPC4Q13310 644 aaKnown RBP eCLIP19.56■□□□□ 0.72
PKD1-226ENST00000562425 SH3D19Q5HYK7 790 aa19.56■□□□□ 0.72
PKD1-226ENST00000562425 TMEM179Q6ZVK1 233 aa19.56■□□□□ 0.72
PKD1-226ENST00000562425 SLC44A5Q8NCS7 719 aa19.56■□□□□ 0.72
PKD1-226ENST00000562425 R3HDMLQ9H3Y0 253 aa19.56■□□□□ 0.72
PKD1-226ENST00000562425 SLC45A1Q9Y2W3 748 aa19.56■□□□□ 0.72
PKD1-226ENST00000562425 CCDC171Q6TFL3 1326 aa19.55■□□□□ 0.72
PKD1-226ENST00000562425 MKI67P46013 3256 aaKnown RBP19.55■□□□□ 0.72
PKD1-226ENST00000562425 ALX1Q15699 326 aa19.55■□□□□ 0.72
PKD1-226ENST00000562425 GPAT2Q6NUI2 795 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms