RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 EIF2AK2P19525 551 aaKnown RBP4.73□□□□□ -1.65
SPG11-225ENST00000561391 JAG1P78504 1218 aa4.73□□□□□ -1.65
SPG11-225ENST00000561391 ARHGAP4P98171 946 aa4.73□□□□□ -1.65
SPG11-225ENST00000561391 ECM1Q16610 540 aa4.73□□□□□ -1.65
SPG11-225ENST00000561391 C8orf34Q49A92 452 aa4.73□□□□□ -1.65
SPG11-225ENST00000561391 DHX32Q7L7V1 743 aaKnown RBP4.73□□□□□ -1.65
SPG11-225ENST00000561391 TTC16Q8NEE8 873 aa4.73□□□□□ -1.65
SPG11-225ENST00000561391 DCAF11Q8TEB1 546 aa4.73□□□□□ -1.65
SPG11-225ENST00000561391 EDEM1Q92611 657 aa4.73□□□□□ -1.65
SPG11-225ENST00000561391 GCC1Q96CN9 775 aa4.73□□□□□ -1.65
SPG11-225ENST00000561391 SMG9Q9H0W8 520 aaKnown RBP4.73□□□□□ -1.65
SPG11-225ENST00000561391 DMGDHQ9UI17 866 aaKnown RBP4.73□□□□□ -1.65
SPG11-225ENST00000561391 POLIQ9UNA4 740 aa4.73□□□□□ -1.65
SPG11-225ENST00000561391 RAXQ9Y2V3 346 aa4.73□□□□□ -1.65
SPG11-225ENST00000561391 BRD4O60885 1362 aaPredicted RBP4.73□□□□□ -1.65
SPG11-225ENST00000561391 CNTNAP1P78357 1384 aa4.73□□□□□ -1.65
SPG11-225ENST00000561391 ANKRD30BQ9BXX2 1392 aa4.73□□□□□ -1.65
SPG11-225ENST00000561391 ALS2Q96Q42 1657 aa4.73□□□□□ -1.65
SPG11-225ENST00000561391 TRPM3Q9HCF6 1732 aaPredicted RBP4.72□□□□□ -1.65
SPG11-225ENST00000561391 F8W735 103 aaPredicted RBP4.72□□□□□ -1.65
SPG11-225ENST00000561391 NDUFB5O43674 189 aa4.72□□□□□ -1.65
SPG11-225ENST00000561391 NPR3P17342 541 aa4.72□□□□□ -1.65
SPG11-225ENST00000561391 INPP5BP32019 993 aa4.72□□□□□ -1.65
SPG11-225ENST00000561391 ARSDP51689 593 aa4.72□□□□□ -1.65
SPG11-225ENST00000561391 MFAP1P55081 439 aaKnown RBP4.72□□□□□ -1.65
SPG11-225ENST00000561391 MAP2K1Q02750 393 aaPredicted RBP4.72□□□□□ -1.65
SPG11-225ENST00000561391 PLAURQ03405 335 aa4.72□□□□□ -1.65
SPG11-225ENST00000561391 GRIK5Q16478 980 aa4.72□□□□□ -1.65
SPG11-225ENST00000561391 PIK3R5Q8WYR1 880 aa4.72□□□□□ -1.65
SPG11-225ENST00000561391 SYTL4Q96C24 671 aaPredicted RBP4.72□□□□□ -1.65
SPG11-225ENST00000561391 NUDT16Q96DE0 195 aaKnown RBP4.72□□□□□ -1.65
SPG11-225ENST00000561391 POGKQ9P215 609 aa4.72□□□□□ -1.65
SPG11-225ENST00000561391 STOML1Q9UBI4 398 aa4.72□□□□□ -1.65
SPG11-225ENST00000561391 RTCBQ9Y3I0 505 aaKnown RBP4.72□□□□□ -1.65
SPG11-225ENST00000561391 NUP155O75694 1391 aa4.72□□□□□ -1.65
SPG11-225ENST00000561391 LRRC37A3O60309 1634 aa4.72□□□□□ -1.65
SPG11-225ENST00000561391 CLTCL1P53675 1640 aa4.72□□□□□ -1.65
SPG11-225ENST00000561391 PITPNM2Q9BZ72 1349 aa4.72□□□□□ -1.65
SPG11-225ENST00000561391 PXDNLA1KZ92 1463 aa4.71□□□□□ -1.66
SPG11-225ENST00000561391 COL5A2P05997 1499 aaPredicted RBP4.71□□□□□ -1.66
SPG11-225ENST00000561391 ABCC11Q96J66 1382 aa4.71□□□□□ -1.66
SPG11-225ENST00000561391 PLEKHG2Q9H7P9 1386 aa4.71□□□□□ -1.66
SPG11-225ENST00000561391 FZD6O60353 706 aa4.71□□□□□ -1.66
SPG11-225ENST00000561391 MED26O95402 600 aa4.71□□□□□ -1.66
SPG11-225ENST00000561391 GCP02774 474 aa4.71□□□□□ -1.66
SPG11-225ENST00000561391 RARAP10276 462 aa4.71□□□□□ -1.66
SPG11-225ENST00000561391 DPEP1P16444 411 aa4.71□□□□□ -1.66
SPG11-225ENST00000561391 PCSK2P16519 638 aa4.71□□□□□ -1.66
SPG11-225ENST00000561391 GPLD1P80108 840 aa4.71□□□□□ -1.66
SPG11-225ENST00000561391 DEFB115Q30KQ5 88 aa4.71□□□□□ -1.66
SPG11-225ENST00000561391 IER5Q5VY09 327 aa4.71□□□□□ -1.66
SPG11-225ENST00000561391 HFE2Q6ZVN8 426 aa4.71□□□□□ -1.66
SPG11-225ENST00000561391 AGGF1Q8N302 714 aaeCLIP4.71□□□□□ -1.66
SPG11-225ENST00000561391 PRAM1Q96QH2 718 aa4.71□□□□□ -1.66
SPG11-225ENST00000561391 FAM13BQ9NYF5 915 aa4.71□□□□□ -1.66
SPG11-225ENST00000561391 DCTN4Q9UJW0 460 aa4.71□□□□□ -1.66
SPG11-225ENST00000561391 CCNL1Q9UK58 526 aaPredicted RBP4.71□□□□□ -1.66
SPG11-225ENST00000561391 C10orf71Q711Q0 1435 aa4.71□□□□□ -1.66
SPG11-225ENST00000561391 ADGRF5Q8IZF2 1346 aa4.71□□□□□ -1.66
SPG11-225ENST00000561391 PRR36Q9H6K5 1346 aa4.71□□□□□ -1.66
SPG11-225ENST00000561391 AKAP12Q02952 1782 aa4.7□□□□□ -1.66
SPG11-225ENST00000561391 TUBGCP6Q96RT7 1819 aa4.7□□□□□ -1.66
SPG11-225ENST00000561391 CRYBG1Q9Y4K1 1723 aa4.7□□□□□ -1.66
SPG11-225ENST00000561391 GLTPD2A6NH11 291 aa4.7□□□□□ -1.66
SPG11-225ENST00000561391 A6NHS1 94 aa4.7□□□□□ -1.66
SPG11-225ENST00000561391 DHX15O43143 795 aaKnown RBP4.7□□□□□ -1.66
SPG11-225ENST00000561391 MAP3K6O95382 1288 aa4.7□□□□□ -1.66
SPG11-225ENST00000561391 PDGFAP04085 211 aa4.7□□□□□ -1.66
SPG11-225ENST00000561391 MZF1P28698 734 aaPredicted RBP4.7□□□□□ -1.66
SPG11-225ENST00000561391 FXR1P51114 621 aaKnown RBP eCLIP4.7□□□□□ -1.66
SPG11-225ENST00000561391 GRM1Q13255 1194 aa4.7□□□□□ -1.66
SPG11-225ENST00000561391 GDF6Q6KF10 455 aaPredicted RBP4.7□□□□□ -1.66
SPG11-225ENST00000561391 INTS5Q6P9B9 1019 aaKnown RBP4.7□□□□□ -1.66
SPG11-225ENST00000561391 TMEM130Q8N3G9 435 aa4.7□□□□□ -1.66
SPG11-225ENST00000561391 TRPM4Q8TD43 1214 aa4.7□□□□□ -1.66
SPG11-225ENST00000561391 TTC9Q92623 222 aa4.7□□□□□ -1.66
SPG11-225ENST00000561391 RPGRIP1LQ68CZ1 1315 aa4.7□□□□□ -1.66
SPG11-225ENST00000561391 WDR33Q9C0J8 1336 aaKnown RBP4.7□□□□□ -1.66
SPG11-225ENST00000561391 QSER1Q2KHR3 1735 aa4.69□□□□□ -1.66
SPG11-225ENST00000561391 IFT172Q9UG01 1749 aa4.69□□□□□ -1.66
SPG11-225ENST00000561391 CPDO75976 1380 aa4.69□□□□□ -1.66
SPG11-225ENST00000561391 XYLBO75191 536 aa4.69□□□□□ -1.66
SPG11-225ENST00000561391 SASH3O75995 380 aa4.69□□□□□ -1.66
SPG11-225ENST00000561391 TGFB2P61812 414 aa4.69□□□□□ -1.66
SPG11-225ENST00000561391 RGL3Q3MIN7 710 aa4.69□□□□□ -1.66
SPG11-225ENST00000561391 LCE4AQ5TA78 99 aa4.69□□□□□ -1.66
SPG11-225ENST00000561391 NLRP13Q86W25 1043 aa4.69□□□□□ -1.66
SPG11-225ENST00000561391 FLAD1Q8NFF5 587 aa4.69□□□□□ -1.66
SPG11-225ENST00000561391 DDX54Q8TDD1 881 aaKnown RBP4.69□□□□□ -1.66
SPG11-225ENST00000561391 CARD10Q9BWT7 1032 aa4.69□□□□□ -1.66
SPG11-225ENST00000561391 GGNBP2Q9H3C7 697 aa4.69□□□□□ -1.66
SPG11-225ENST00000561391 SRA1Q9HD15 236 aaKnown RBP4.69□□□□□ -1.66
SPG11-225ENST00000561391 ZFATQ9P243 1243 aa4.69□□□□□ -1.66
SPG11-225ENST00000561391 FNDC3AQ9Y2H6 1198 aaKnown RBP4.69□□□□□ -1.66
SPG11-225ENST00000561391 BTAF1O14981 1849 aa4.69□□□□□ -1.66
SPG11-225ENST00000561391 WDR17Q8IZU2 1322 aa4.69□□□□□ -1.66
SPG11-225ENST00000561391 CICQ96RK0 1608 aaPredicted RBP4.68□□□□□ -1.66
SPG11-225ENST00000561391 ANKRD33BA6NCL7 494 aa4.68□□□□□ -1.66
SPG11-225ENST00000561391 ZBTB42B2RXF5 422 aa4.68□□□□□ -1.66
SPG11-225ENST00000561391 WNT11O96014 354 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms