RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 FBXO21O94952 628 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 UPP2O95045 317 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 ZRANB2O95218 330 aaKnown RBP eCLIP2.49□□□□□ -2.01
RTF1-207ENST00000561076 IL33O95760 270 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 ASLP04424 464 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 HSP90AB1P08238 724 aaKnown RBP2.49□□□□□ -2.01
RTF1-207ENST00000561076 PF4V1P10720 104 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 COL6A1P12109 1028 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 PHKG2P15735 406 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 HSPA6P17066 643 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 NME2P22392 152 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 ADD1P35611 737 aaKnown RBP2.49□□□□□ -2.01
RTF1-207ENST00000561076 DDIT3P35638 169 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 HALP42357 657 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 EMP3P54852 163 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 GEMIN4P57678 1058 aaKnown RBP2.49□□□□□ -2.01
RTF1-207ENST00000561076 RBM10P98175 930 aaKnown RBP2.49□□□□□ -2.01
RTF1-207ENST00000561076 EVX2Q03828 476 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 PDE4BQ07343 736 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 DHCR24Q15392 516 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 CTC1Q2NKJ3 1217 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 SLC10A6Q3KNW5 377 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 RPS26P11Q5JNZ5 115 aaPredicted RBP2.49□□□□□ -2.01
RTF1-207ENST00000561076 FAM209AQ5JX71 171 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 RC3H1Q5TC82 1133 aaKnown RBP2.49□□□□□ -2.01
RTF1-207ENST00000561076 RUFY4Q6ZNE9 571 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 ADAT2Q7Z6V5 191 aaKnown RBP2.49□□□□□ -2.01
RTF1-207ENST00000561076 NLRP8Q86W28 1048 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 CCNJLQ8IV13 435 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 FAM186BQ8IYM0 893 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 MICALL1Q8N3F8 863 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 CRACR2BQ8N4Y2 399 aaPredicted RBP2.49□□□□□ -2.01
RTF1-207ENST00000561076 GLIS3Q8NEA6 775 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 CXorf38Q8TB03 319 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 LTV1Q96GA3 475 aaPredicted RBP2.49□□□□□ -2.01
RTF1-207ENST00000561076 NEUROD6Q96NK8 337 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 CDK15Q96Q40 435 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 MYD88Q99836 296 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 SARGQ9BW04 601 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 FHDC1Q9C0D6 1143 aaPredicted RBP2.49□□□□□ -2.01
RTF1-207ENST00000561076 CSRNP2Q9H175 543 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 CHRDQ9H2X0 955 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 ZNF395Q9H8N7 513 aaPredicted RBP2.49□□□□□ -2.01
RTF1-207ENST00000561076 PTPRHQ9HD43 1115 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 POLMQ9NP87 494 aaPredicted RBP2.49□□□□□ -2.01
RTF1-207ENST00000561076 BRD7Q9NPI1 651 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 NLRC4Q9NPP4 1024 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 C11orf16Q9NQ32 467 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 PLCB1Q9NQ66 1216 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 SEC31BQ9NQW1 1179 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 CHST12Q9NRB3 414 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 PICK1Q9NRD5 415 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 ZFATQ9P243 1243 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 SAP30BPQ9UHR5 308 aaKnown RBP2.49□□□□□ -2.01
RTF1-207ENST00000561076 EVLQ9UI08 416 aaPredicted RBP2.49□□□□□ -2.01
RTF1-207ENST00000561076 HDAC9Q9UKV0 1011 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 PNMA8BQ9ULN7 279 aaPredicted RBP2.49□□□□□ -2.01
RTF1-207ENST00000561076 TPX2Q9ULW0 747 aaKnown RBP2.49□□□□□ -2.01
RTF1-207ENST00000561076 ZNF652Q9Y2D9 606 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 ZKSCAN5Q9Y2L8 839 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 GIT1Q9Y2X7 761 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 PCDHB5Q9Y5E4 795 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 KCNMB2Q9Y691 235 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 TLL2Q9Y6L7 1015 aa2.49□□□□□ -2.01
RTF1-207ENST00000561076 MORC2Q9Y6X9 1032 aaPredicted RBP2.49□□□□□ -2.01
RTF1-207ENST00000561076 POTEB3A0JP26 581 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 ANO9A1A5B4 782 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 ENC1O14682 589 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 PRODHO43272 600 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 EPB41L2O43491 1005 aaKnown RBP2.48□□□□□ -2.01
RTF1-207ENST00000561076 CILPO75339 1184 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 CFBP00751 764 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 GHRHP01286 108 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 CYP2E1P05181 493 aaPredicted RBP2.48□□□□□ -2.01
RTF1-207ENST00000561076 PTMAP06454 111 aaKnown RBP2.48□□□□□ -2.01
RTF1-207ENST00000561076 JMJD7P0C870 316 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 RAG1P15918 1043 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 NAT1P18440 290 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 GPC1P35052 558 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 IGFALSP35858 605 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 GRM5P41594 1212 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 RECQLP46063 649 aaPredicted RBP2.48□□□□□ -2.01
RTF1-207ENST00000561076 DGKGP49619 791 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 AK2P54819 239 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 OCRLQ01968 901 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 MAP3K10Q02779 954 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 RPL6Q02878 288 aaKnown RBP2.48□□□□□ -2.01
RTF1-207ENST00000561076 NEUROD1Q13562 356 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 CCINQ13939 588 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 CLUL1Q15846 466 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 C4orf17Q53FE4 359 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 FAM83BQ5T0W9 1011 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 ICE2Q659A1 982 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 HEATR6Q6AI08 1181 aaKnown RBP2.48□□□□□ -2.01
RTF1-207ENST00000561076 CC2D1AQ6P1N0 951 aaPredicted RBP2.48□□□□□ -2.01
RTF1-207ENST00000561076 PKN3Q6P5Z2 889 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 PGM2L1Q6PCE3 622 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 POTEBQ6S5H4 581 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 NSMFQ6X4W1 530 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 UNC5AQ6ZN44 842 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms