RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 AOC2O75106 756 aa16.68■□□□□ 0.26
PKNOX1-209ENST00000560448 CETPP11597 493 aa16.68■□□□□ 0.26
PKNOX1-209ENST00000560448 CERKLQ49MI3 558 aaPredicted RBP16.68■□□□□ 0.26
PKNOX1-209ENST00000560448 CWC27Q6UX04 472 aaKnown RBP16.68■□□□□ 0.26
PKNOX1-209ENST00000560448 EPB41L4AQ9HCS5 686 aaPredicted RBP16.68■□□□□ 0.26
PKNOX1-209ENST00000560448 CABP5Q9NP86 173 aa16.68■□□□□ 0.26
PKNOX1-209ENST00000560448 FAM196BA6NMK8 535 aa16.67■□□□□ 0.26
PKNOX1-209ENST00000560448 USP17L5A8MUK1 530 aa16.67■□□□□ 0.26
PKNOX1-209ENST00000560448 IRF6O14896 467 aa16.67■□□□□ 0.26
PKNOX1-209ENST00000560448 DSCC1Q9BVC3 393 aa16.67■□□□□ 0.26
PKNOX1-209ENST00000560448 ATAD5Q96QE3 1844 aa16.66■□□□□ 0.26
PKNOX1-209ENST00000560448 HSPD1P10809 573 aaKnown RBP16.66■□□□□ 0.26
PKNOX1-209ENST00000560448 PCP11498 1178 aaKnown RBP16.66■□□□□ 0.26
PKNOX1-209ENST00000560448 SHMT1P34896 483 aa16.66■□□□□ 0.26
PKNOX1-209ENST00000560448 CASC1Q6TDU7 716 aa16.66■□□□□ 0.26
PKNOX1-209ENST00000560448 MS4A4AQ96JQ5 239 aa16.66■□□□□ 0.26
PKNOX1-209ENST00000560448 WDR18Q9BV38 432 aa16.66■□□□□ 0.26
PKNOX1-209ENST00000560448 CFHR5Q9BXR6 569 aa16.66■□□□□ 0.26
PKNOX1-209ENST00000560448 ZBTB21Q9ULJ3 1066 aa16.66■□□□□ 0.26
PKNOX1-209ENST00000560448 AFG3L2Q9Y4W6 797 aa16.66■□□□□ 0.26
PKNOX1-209ENST00000560448 ZHX2Q9Y6X8 837 aa16.66■□□□□ 0.26
PKNOX1-209ENST00000560448 CHMLP26374 656 aa16.65■□□□□ 0.26
PKNOX1-209ENST00000560448 GJA5P36382 358 aa16.65■□□□□ 0.26
PKNOX1-209ENST00000560448 PDE4BQ07343 736 aa16.65■□□□□ 0.26
PKNOX1-209ENST00000560448 ABCB5Q2M3G0 1257 aa16.65■□□□□ 0.26
PKNOX1-209ENST00000560448 TMEM179Q6ZVK1 233 aa16.65■□□□□ 0.26
PKNOX1-209ENST00000560448 FASTKD5Q7L8L6 764 aaKnown RBP16.65■□□□□ 0.26
PKNOX1-209ENST00000560448 ZNF280CQ8ND82 737 aa16.65■□□□□ 0.26
PKNOX1-209ENST00000560448 BACH2Q9BYV9 841 aa16.65■□□□□ 0.26
PKNOX1-209ENST00000560448 CTNNA3Q9UI47 895 aa16.65■□□□□ 0.26
PKNOX1-209ENST00000560448 ANAPC4Q9UJX5 808 aa16.65■□□□□ 0.26
PKNOX1-209ENST00000560448 MYH8P13535 1937 aa16.65■□□□□ 0.26
PKNOX1-209ENST00000560448 C19orf81C9J6K1 198 aa16.64■□□□□ 0.25
PKNOX1-209ENST00000560448 CDK8P49336 464 aa16.64■□□□□ 0.25
PKNOX1-209ENST00000560448 CCDC129Q6ZRS4 1044 aa16.64■□□□□ 0.25
PKNOX1-209ENST00000560448 ZNF589Q86UQ0 364 aaPredicted RBP16.64■□□□□ 0.25
PKNOX1-209ENST00000560448 IFNL1Q8IU54 200 aa16.64■□□□□ 0.25
PKNOX1-209ENST00000560448 A0A0G2JLL6 359 aaPredicted RBP16.63■□□□□ 0.25
PKNOX1-209ENST00000560448 MINDY4BA8MYZ0 360 aa16.63■□□□□ 0.25
PKNOX1-209ENST00000560448 FOXP2O15409 715 aa16.63■□□□□ 0.25
PKNOX1-209ENST00000560448 PPARAQ07869 468 aa16.63■□□□□ 0.25
PKNOX1-209ENST00000560448 SLC4A8Q2Y0W8 1093 aa16.63■□□□□ 0.25
PKNOX1-209ENST00000560448 NOM1Q5C9Z4 860 aaKnown RBP16.63■□□□□ 0.25
PKNOX1-209ENST00000560448 PPP4R3BQ5MIZ7 849 aa16.63■□□□□ 0.25
PKNOX1-209ENST00000560448 PRRT2Q7Z6L0 340 aaPredicted RBP16.63■□□□□ 0.25
PKNOX1-209ENST00000560448 MKNK2Q9HBH9 465 aa16.63■□□□□ 0.25
PKNOX1-209ENST00000560448 SLC45A1Q9Y2W3 748 aa16.63■□□□□ 0.25
PKNOX1-209ENST00000560448 PHIPQ8WWQ0 1821 aa16.63■□□□□ 0.25
PKNOX1-209ENST00000560448 CCL15-CCL14A0A0B4J2E2 113 aa16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 GDF11O95390 407 aa16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 GH2P01242 217 aa16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 FGAP02671 866 aa16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 HSPA1AP0DMV8 641 aaKnown RBP16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 HSPA1BP0DMV9 641 aaKnown RBP16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 CYP2D6P10635 497 aa16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 MKRN3Q13064 507 aaKnown RBP16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 CCL15Q16663 113 aa16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 PROCA1Q8NCQ7 364 aaPredicted RBP16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 CNKSR2Q8WXI2 1034 aa16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 ZIC5Q96T25 663 aa16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 SGSM2O43147 1006 aa16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 SLURP2P0DP57 97 aa16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 CTCFP49711 727 aaPredicted RBP16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 USP14P54578 494 aa16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 RRP1BQ14684 758 aaKnown RBP16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 SH3D19Q5HYK7 790 aa16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 VPS53Q5VIR6 699 aa16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 ANKRD23Q86SG2 305 aa16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 RNF41Q9H4P4 317 aaPredicted RBP16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 SH2D4AQ9H788 454 aa16.62■□□□□ 0.25
PKNOX1-209ENST00000560448 USP17L10C9JJH3 530 aa16.61■□□□□ 0.25
PKNOX1-209ENST00000560448 FGRP09769 529 aa16.61■□□□□ 0.25
PKNOX1-209ENST00000560448 BACE1P56817 501 aa16.61■□□□□ 0.25
PKNOX1-209ENST00000560448 PABPC4Q13310 644 aaKnown RBP eCLIP16.61■□□□□ 0.25
PKNOX1-209ENST00000560448 ZNF444Q8N0Y2 327 aaPredicted RBP16.61■□□□□ 0.25
PKNOX1-209ENST00000560448 BRI3BPQ8WY22 251 aa16.61■□□□□ 0.25
PKNOX1-209ENST00000560448 DYNLL2Q96FJ2 89 aa16.61■□□□□ 0.25
PKNOX1-209ENST00000560448 KANSL2Q9H9L4 492 aa16.61■□□□□ 0.25
PKNOX1-209ENST00000560448 RNF186Q9NXI6 227 aa16.61■□□□□ 0.25
PKNOX1-209ENST00000560448 SYNPO2Q9UMS6 1093 aa16.61■□□□□ 0.25
PKNOX1-209ENST00000560448 PLIN4Q96Q06 1357 aa16.6■□□□□ 0.25
PKNOX1-209ENST00000560448 PTPRFP10586 1907 aa16.6■□□□□ 0.25
PKNOX1-209ENST00000560448 CYP2D7A0A087X1C5 515 aa16.6■□□□□ 0.25
PKNOX1-209ENST00000560448 ZNF213O14771 459 aa16.6■□□□□ 0.25
PKNOX1-209ENST00000560448 CDC45O75419 566 aa16.6■□□□□ 0.25
PKNOX1-209ENST00000560448 SPP2Q13103 211 aa16.6■□□□□ 0.25
PKNOX1-209ENST00000560448 RAB3GAP1Q15042 981 aa16.6■□□□□ 0.25
PKNOX1-209ENST00000560448 IMMTQ16891 758 aaKnown RBP16.6■□□□□ 0.25
PKNOX1-209ENST00000560448 KIAA1211Q6ZU35 1233 aa16.6■□□□□ 0.25
PKNOX1-209ENST00000560448 SLC44A5Q8NCS7 719 aa16.6■□□□□ 0.25
PKNOX1-209ENST00000560448 ARHGEF10LQ9HCE6 1279 aa16.6■□□□□ 0.25
PKNOX1-209ENST00000560448 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.6■□□□□ 0.25
PKNOX1-209ENST00000560448 TRIM75PA6NK02 468 aa16.59■□□□□ 0.25
PKNOX1-209ENST00000560448 MPHOSPH10O00566 681 aaKnown RBP16.59■□□□□ 0.25
PKNOX1-209ENST00000560448 ORC4O43929 436 aa16.59■□□□□ 0.25
PKNOX1-209ENST00000560448 C12orf42Q96LP6 360 aa16.59■□□□□ 0.25
PKNOX1-209ENST00000560448 KIAA1683Q9H0B3 1180 aa16.59■□□□□ 0.25
PKNOX1-209ENST00000560448 TMOD4Q9NZQ9 345 aa16.59■□□□□ 0.25
PKNOX1-209ENST00000560448 PNMA3Q9UL41 463 aa16.59■□□□□ 0.25
PKNOX1-209ENST00000560448 AGTPBP1Q9UPW5 1226 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms