RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 TMOD4Q9NZQ9 345 aa16.53■□□□□ 0.24
SMAD3-214ENST00000560402 PLXNB2O15031 1838 aa16.52■□□□□ 0.24
SMAD3-214ENST00000560402 C19orf81C9J6K1 198 aa16.52■□□□□ 0.24
SMAD3-214ENST00000560402 INHAP05111 366 aa16.52■□□□□ 0.24
SMAD3-214ENST00000560402 MS4A1P11836 297 aa16.52■□□□□ 0.24
SMAD3-214ENST00000560402 BACE1P56817 501 aa16.52■□□□□ 0.24
SMAD3-214ENST00000560402 IRX3P78415 501 aaPredicted RBP16.52■□□□□ 0.24
SMAD3-214ENST00000560402 HSP90AB4PQ58FF6 505 aa16.52■□□□□ 0.24
SMAD3-214ENST00000560402 PIH1D3Q9NQM4 214 aaKnown RBP16.52■□□□□ 0.24
SMAD3-214ENST00000560402 TLR7Q9NYK1 1049 aaKnown RBP16.52■□□□□ 0.24
SMAD3-214ENST00000560402 MORF4L1Q9UBU8 362 aa16.52■□□□□ 0.24
SMAD3-214ENST00000560402 IDH1O75874 414 aaKnown RBP16.51■□□□□ 0.23
SMAD3-214ENST00000560402 FARP2O94887 1054 aaPredicted RBP16.51■□□□□ 0.23
SMAD3-214ENST00000560402 CYP7A1P22680 504 aa16.51■□□□□ 0.23
SMAD3-214ENST00000560402 HOXA7P31268 230 aaPredicted RBP16.51■□□□□ 0.23
SMAD3-214ENST00000560402 MTMR2Q13614 643 aa16.51■□□□□ 0.23
SMAD3-214ENST00000560402 GTF3C2Q8WUA4 911 aaPredicted RBP16.51■□□□□ 0.23
SMAD3-214ENST00000560402 EAF2Q96CJ1 260 aaPredicted RBP16.51■□□□□ 0.23
SMAD3-214ENST00000560402 CCDC8Q9H0W5 538 aaPredicted RBP16.51■□□□□ 0.23
SMAD3-214ENST00000560402 UNC93B1Q9H1C4 597 aa16.51■□□□□ 0.23
SMAD3-214ENST00000560402 ZBTB21Q9ULJ3 1066 aa16.51■□□□□ 0.23
SMAD3-214ENST00000560402 USP17L10C9JJH3 530 aa16.5■□□□□ 0.23
SMAD3-214ENST00000560402 SGPL1O95470 568 aa16.5■□□□□ 0.23
SMAD3-214ENST00000560402 ELNP15502 786 aa16.5■□□□□ 0.23
SMAD3-214ENST00000560402 MAP3K12Q12852 859 aa16.5■□□□□ 0.23
SMAD3-214ENST00000560402 EHD4Q9H223 541 aa16.5■□□□□ 0.23
SMAD3-214ENST00000560402 PAK6Q9NQU5 681 aaPredicted RBP16.5■□□□□ 0.23
SMAD3-214ENST00000560402 PALD1Q9ULE6 856 aa16.5■□□□□ 0.23
SMAD3-214ENST00000560402 H0YGN5 161 aa16.49■□□□□ 0.23
SMAD3-214ENST00000560402 HMGCRP04035 888 aa16.49■□□□□ 0.23
SMAD3-214ENST00000560402 AACSQ86V21 672 aa16.49■□□□□ 0.23
SMAD3-214ENST00000560402 CCDC136Q96JN2 1154 aa16.49■□□□□ 0.23
SMAD3-214ENST00000560402 GDF11O95390 407 aa16.48■□□□□ 0.23
SMAD3-214ENST00000560402 USP5P45974 858 aa16.48■□□□□ 0.23
SMAD3-214ENST00000560402 DYNLL1P63167 89 aaKnown RBP16.48■□□□□ 0.23
SMAD3-214ENST00000560402 TTF1Q15361 905 aaPredicted RBP16.48■□□□□ 0.23
SMAD3-214ENST00000560402 MAGEB6Q8N7X4 407 aa16.48■□□□□ 0.23
SMAD3-214ENST00000560402 SOCS4Q8WXH5 440 aa16.48■□□□□ 0.23
SMAD3-214ENST00000560402 DPF3Q92784 378 aa16.48■□□□□ 0.23
SMAD3-214ENST00000560402 SAP30BPQ9UHR5 308 aaKnown RBP16.48■□□□□ 0.23
SMAD3-214ENST00000560402 TAOK2Q9UL54 1235 aa16.48■□□□□ 0.23
SMAD3-214ENST00000560402 COLQQ9Y215 455 aaPredicted RBP16.48■□□□□ 0.23
SMAD3-214ENST00000560402 EXOC6BQ9Y2D4 811 aa16.48■□□□□ 0.23
SMAD3-214ENST00000560402 NR2E3Q9Y5X4 410 aa16.48■□□□□ 0.23
SMAD3-214ENST00000560402 MYH8P13535 1937 aa16.48■□□□□ 0.23
SMAD3-214ENST00000560402 FXR1P51114 621 aaKnown RBP eCLIP16.47■□□□□ 0.23
SMAD3-214ENST00000560402 HERVK_113P62684 666 aa16.47■□□□□ 0.23
SMAD3-214ENST00000560402 TTC6Q86TZ1 520 aa16.47■□□□□ 0.23
SMAD3-214ENST00000560402 MIGA1Q8NAN2 632 aa16.47■□□□□ 0.23
SMAD3-214ENST00000560402 C12orf42Q96LP6 360 aa16.47■□□□□ 0.23
SMAD3-214ENST00000560402 DEFB118Q96PH6 123 aa16.47■□□□□ 0.23
SMAD3-214ENST00000560402 CRISPLD2Q9H0B8 497 aa16.47■□□□□ 0.23
SMAD3-214ENST00000560402 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.47■□□□□ 0.23
SMAD3-214ENST00000560402 SERPINB13Q9UIV8 391 aa16.47■□□□□ 0.23
SMAD3-214ENST00000560402 MYH7P12883 1935 aa16.47■□□□□ 0.23
SMAD3-214ENST00000560402 ALPK3Q96L96 1907 aa16.47■□□□□ 0.23
SMAD3-214ENST00000560402 TRIOBPQ9H2D6 2365 aa16.46■□□□□ 0.23
SMAD3-214ENST00000560402 HMMRO75330 724 aa16.46■□□□□ 0.23
SMAD3-214ENST00000560402 TATDN1Q6P1N9 297 aa16.46■□□□□ 0.23
SMAD3-214ENST00000560402 USP17L2Q6R6M4 530 aa16.46■□□□□ 0.23
SMAD3-214ENST00000560402 TRMT44Q8IYL2 757 aaKnown RBP16.46■□□□□ 0.23
SMAD3-214ENST00000560402 ANKLE1Q8NAG6 615 aa16.46■□□□□ 0.23
SMAD3-214ENST00000560402 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.46■□□□□ 0.23
SMAD3-214ENST00000560402 KIF1BPQ96EK5 621 aa16.46■□□□□ 0.23
SMAD3-214ENST00000560402 DDX19BQ9UMR2 479 aa16.46■□□□□ 0.23
SMAD3-214ENST00000560402 TFRCP02786 760 aaKnown RBP16.45■□□□□ 0.22
SMAD3-214ENST00000560402 MAPK4P31152 587 aa16.45■□□□□ 0.22
SMAD3-214ENST00000560402 USP14P54578 494 aa16.45■□□□□ 0.22
SMAD3-214ENST00000560402 JAG1P78504 1218 aa16.45■□□□□ 0.22
SMAD3-214ENST00000560402 PDE3AQ14432 1141 aa16.45■□□□□ 0.22
SMAD3-214ENST00000560402 RPAP2Q8IXW5 612 aaPredicted RBP16.45■□□□□ 0.22
SMAD3-214ENST00000560402 CLASRPQ8N2M8 674 aaKnown RBP16.45■□□□□ 0.22
SMAD3-214ENST00000560402 GPRC5AQ8NFJ5 357 aa16.45■□□□□ 0.22
SMAD3-214ENST00000560402 RHPN1Q8TCX5 695 aa16.45■□□□□ 0.22
SMAD3-214ENST00000560402 PANK1Q8TE04 598 aa16.45■□□□□ 0.22
SMAD3-214ENST00000560402 FEZ1Q99689 392 aa16.45■□□□□ 0.22
SMAD3-214ENST00000560402 CHMP4BQ9H444 224 aaKnown RBP16.45■□□□□ 0.22
SMAD3-214ENST00000560402 GJD2Q9UKL4 321 aa16.45■□□□□ 0.22
SMAD3-214ENST00000560402 GH2P01242 217 aa16.44■□□□□ 0.22
SMAD3-214ENST00000560402 XRCC5P13010 732 aaKnown RBP16.44■□□□□ 0.22
SMAD3-214ENST00000560402 ERVK-9P63128 1117 aa16.44■□□□□ 0.22
SMAD3-214ENST00000560402 ERVK-24P63145 666 aa16.44■□□□□ 0.22
SMAD3-214ENST00000560402 CHRDL2Q6WN34 429 aa16.44■□□□□ 0.22
SMAD3-214ENST00000560402 P2RX7Q99572 595 aaKnown RBP16.44■□□□□ 0.22
SMAD3-214ENST00000560402 NUDT12Q9BQG2 462 aa16.44■□□□□ 0.22
SMAD3-214ENST00000560402 RIOK1Q9BRS2 568 aaKnown RBP16.44■□□□□ 0.22
SMAD3-214ENST00000560402 ANTXR1Q9H6X2 564 aa16.44■□□□□ 0.22
SMAD3-214ENST00000560402 HMX1Q9NP08 348 aaPredicted RBP16.44■□□□□ 0.22
SMAD3-214ENST00000560402 FRMPD3Q5JV73 1810 aa16.44■□□□□ 0.22
SMAD3-214ENST00000560402 RPTORQ8N122 1335 aa16.44■□□□□ 0.22
SMAD3-214ENST00000560402 SHROOM1Q2M3G4 852 aaPredicted RBP16.43■□□□□ 0.22
SMAD3-214ENST00000560402 CRNKL1Q9BZJ0 848 aaKnown RBP16.43■□□□□ 0.22
SMAD3-214ENST00000560402 KIAA1683Q9H0B3 1180 aa16.43■□□□□ 0.22
SMAD3-214ENST00000560402 IL1RAPL2Q9NP60 686 aa16.43■□□□□ 0.22
SMAD3-214ENST00000560402 CABP5Q9NP86 173 aa16.43■□□□□ 0.22
SMAD3-214ENST00000560402 EMILIN3Q9NT22 766 aa16.43■□□□□ 0.22
SMAD3-214ENST00000560402 NDUFB9Q9Y6M9 179 aa16.43■□□□□ 0.22
SMAD3-214ENST00000560402 MAGEB6P1A0A0J9YX57 407 aa16.42■□□□□ 0.22
SMAD3-214ENST00000560402 EVI5O60447 810 aa16.42■□□□□ 0.22
SMAD3-214ENST00000560402 RAB11FIP3O75154 756 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms