RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 ODF2LQ9ULJ1 636 aa6.72□□□□□ -1.33
CTDSPL2-206ENST00000559175 PHLPP1O60346 1717 aa6.72□□□□□ -1.33
CTDSPL2-206ENST00000559175 PARP4Q9UKK3 1724 aaKnown RBP6.72□□□□□ -1.33
CTDSPL2-206ENST00000559175 GNA15P30679 374 aa6.71□□□□□ -1.33
CTDSPL2-206ENST00000559175 ZNF132P52740 706 aa6.71□□□□□ -1.33
CTDSPL2-206ENST00000559175 PIP4K2BP78356 416 aa6.71□□□□□ -1.33
CTDSPL2-206ENST00000559175 LRGUKQ96M69 825 aa6.71□□□□□ -1.33
CTDSPL2-206ENST00000559175 LGR6Q9HBX8 967 aa6.71□□□□□ -1.33
CTDSPL2-206ENST00000559175 ADGRG1Q9Y653 693 aa6.71□□□□□ -1.33
CTDSPL2-206ENST00000559175 DDX49Q9Y6V7 483 aaKnown RBP6.71□□□□□ -1.33
CTDSPL2-206ENST00000559175 PLEKHG2Q9H7P9 1386 aa6.71□□□□□ -1.33
CTDSPL2-206ENST00000559175 NPC1L1Q9UHC9 1359 aa6.71□□□□□ -1.33
CTDSPL2-206ENST00000559175 WASLO00401 505 aaPredicted RBP6.71□□□□□ -1.34
CTDSPL2-206ENST00000559175 PIN1Q13526 163 aaPredicted RBP6.71□□□□□ -1.34
CTDSPL2-206ENST00000559175 TUBB8Q3ZCM7 444 aa6.71□□□□□ -1.34
CTDSPL2-206ENST00000559175 COBLL1Q53SF7 1204 aa6.71□□□□□ -1.34
CTDSPL2-206ENST00000559175 USP33Q8TEY7 942 aa6.71□□□□□ -1.34
CTDSPL2-206ENST00000559175 NUDT16Q96DE0 195 aaKnown RBP6.71□□□□□ -1.34
CTDSPL2-206ENST00000559175 ABCG4Q9H172 646 aa6.71□□□□□ -1.34
CTDSPL2-206ENST00000559175 DNAAF2Q9NVR5 837 aaKnown RBP6.71□□□□□ -1.34
CTDSPL2-206ENST00000559175 CDV3Q9UKY7 258 aaKnown RBP6.71□□□□□ -1.34
CTDSPL2-206ENST00000559175 PLEKHG1Q9ULL1 1385 aa6.71□□□□□ -1.34
CTDSPL2-206ENST00000559175 KIF5CO60282 957 aa6.71□□□□□ -1.34
CTDSPL2-206ENST00000559175 PDE8AO60658 829 aa6.71□□□□□ -1.34
CTDSPL2-206ENST00000559175 OATP04181 439 aa6.71□□□□□ -1.34
CTDSPL2-206ENST00000559175 CD46P15529 392 aa6.71□□□□□ -1.34
CTDSPL2-206ENST00000559175 UBA7P41226 1012 aa6.71□□□□□ -1.34
CTDSPL2-206ENST00000559175 LHFPL2Q6ZUX7 228 aa6.71□□□□□ -1.34
CTDSPL2-206ENST00000559175 BTN2A1Q7KYR7 527 aa6.71□□□□□ -1.34
CTDSPL2-206ENST00000559175 KIAA0825Q8IV33 1275 aa6.71□□□□□ -1.34
CTDSPL2-206ENST00000559175 NOL10Q9BSC4 688 aaKnown RBP6.71□□□□□ -1.34
CTDSPL2-206ENST00000559175 DMTF1Q9Y222 760 aa6.71□□□□□ -1.34
CTDSPL2-206ENST00000559175 ADAMTS13Q76LX8 1427 aa6.71□□□□□ -1.34
CTDSPL2-206ENST00000559175 SHANK3Q9BYB0 1731 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 C19orf81C9J6K1 198 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 F5H423 210 aaPredicted RBP6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 KIF1CO43896 1103 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 IFRD2Q12894 506 aaPredicted RBP6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 IFT88Q13099 833 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 CBX2Q14781 532 aaPredicted RBP6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 PNMA8AQ86V59 439 aaPredicted RBP6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 THNSL2Q86YJ6 484 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 PLEKHM2Q8IWE5 1019 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 APPL2Q8NEU8 664 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 CDH19Q9H159 772 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 VPS45Q9NRW7 570 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 TMCO5BA8MYB1 307 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 ZSCAN20P17040 1043 aaPredicted RBP6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 CAPN2P17655 700 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 SFSWAPQ12872 951 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 MORC3Q14149 939 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 RNF135Q8IUD6 432 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 ERCC4Q92889 916 aaPredicted RBP6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 FMNL2Q96PY5 1086 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 SERINC2Q96SA4 455 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 AFG3L2Q9Y4W6 797 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 NUP155O75694 1391 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 ERBB4Q15303 1308 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 CDK12Q9NYV4 1490 aaPredicted RBP6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 GFPT2O94808 682 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 MBD4O95243 580 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 FDX1P10109 184 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 TAF1CQ15572 869 aaPredicted RBP6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 WDR45BQ5MNZ6 344 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 KCT2Q8NC54 265 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 PHC3Q8NDX5 983 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 TRPM4Q8TD43 1214 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 CPLX3Q8WVH0 158 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 IRAK4Q9NWZ3 460 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 DONSONQ9NYP3 566 aa6.7□□□□□ -1.34
CTDSPL2-206ENST00000559175 PLA2G4AP47712 749 aa6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 BPIFB3P59826 476 aa6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 INF2Q27J81 1249 aa6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 FAM133BQ5BKY9 247 aaKnown RBP6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 UNC5DQ6UXZ4 953 aa6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 TAX1BP1Q86VP1 789 aa6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 TRIM22Q8IYM9 498 aa6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 SAMD14Q8IZD0 417 aaPredicted RBP6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 ZNF396Q96N95 335 aaPredicted RBP6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 IWS1Q96ST2 819 aa6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 FNIP2Q9P278 1114 aa6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 KIF16BQ96L93 1317 aa6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 FAM135BQ49AJ0 1406 aa6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 H0Y3Z8 333 aa6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 KCNQ2O43526 872 aa6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 IFIT1P09914 478 aaKnown RBP6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 IL4RP24394 825 aa6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 STAT3P40763 770 aa6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 PTPN14Q15678 1187 aa6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 ATCAYQ86WG3 371 aa6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 TSEN2Q8NCE0 465 aaKnown RBP6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 PNMA1Q8ND90 353 aa6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 MCM8Q9UJA3 840 aa6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 RRP15Q9Y3B9 282 aaKnown RBP6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 LRRC37A3O60309 1634 aa6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 LRP6O75581 1613 aa6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 KTN1Q86UP2 1357 aaKnown RBP6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 CCDC66A2RUB6 948 aa6.69□□□□□ -1.34
CTDSPL2-206ENST00000559175 MYBP10242 640 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms