RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 SIPA1L1O43166 1804 aa18.81■□□□□ 0.6
CPNE6-208ENST00000558795 C19orf81C9J6K1 198 aa18.81■□□□□ 0.6
CPNE6-208ENST00000558795 XRCC5P13010 732 aaKnown RBP18.81■□□□□ 0.6
CPNE6-208ENST00000558795 ZKSCAN1P17029 563 aaPredicted RBP18.81■□□□□ 0.6
CPNE6-208ENST00000558795 MAGEA10P43363 369 aaPredicted RBP18.81■□□□□ 0.6
CPNE6-208ENST00000558795 MNX1P50219 401 aaPredicted RBP18.81■□□□□ 0.6
CPNE6-208ENST00000558795 HERVK_113P62684 666 aa18.81■□□□□ 0.6
CPNE6-208ENST00000558795 MAP3K21Q5TCX8 1036 aa18.81■□□□□ 0.6
CPNE6-208ENST00000558795 NAA16Q6N069 864 aaPredicted RBP18.81■□□□□ 0.6
CPNE6-208ENST00000558795 TRMT44Q8IYL2 757 aaKnown RBP18.81■□□□□ 0.6
CPNE6-208ENST00000558795 DEFB123Q8N688 67 aa18.81■□□□□ 0.6
CPNE6-208ENST00000558795 USP17L10C9JJH3 530 aa18.8■□□□□ 0.6
CPNE6-208ENST00000558795 GNAI2P04899 355 aa18.8■□□□□ 0.6
CPNE6-208ENST00000558795 MAPK4P31152 587 aa18.8■□□□□ 0.6
CPNE6-208ENST00000558795 RARSP54136 660 aaKnown RBP18.8■□□□□ 0.6
CPNE6-208ENST00000558795 MAPKAPK5Q8IW41 473 aa18.8■□□□□ 0.6
CPNE6-208ENST00000558795 TDHQ8IZJ6 230 aa18.8■□□□□ 0.6
CPNE6-208ENST00000558795 TGFBRAP1Q8WUH2 860 aa18.8■□□□□ 0.6
CPNE6-208ENST00000558795 UBE2OQ9C0C9 1292 aaKnown RBP18.8■□□□□ 0.6
CPNE6-208ENST00000558795 TXNRD2Q9NNW7 524 aa18.8■□□□□ 0.6
CPNE6-208ENST00000558795 GINM1Q9NU53 330 aa18.8■□□□□ 0.6
CPNE6-208ENST00000558795 FLT1P17948 1338 aa18.79■□□□□ 0.6
CPNE6-208ENST00000558795 PEX10O60683 326 aa18.79■□□□□ 0.6
CPNE6-208ENST00000558795 GDF11O95390 407 aa18.79■□□□□ 0.6
CPNE6-208ENST00000558795 LRIT3Q3SXY7 679 aa18.79■□□□□ 0.6
CPNE6-208ENST00000558795 TTC39AQ5SRH9 613 aa18.79■□□□□ 0.6
CPNE6-208ENST00000558795 FOXP4Q8IVH2 680 aaPredicted RBP18.79■□□□□ 0.6
CPNE6-208ENST00000558795 GTF3C2Q8WUA4 911 aaPredicted RBP18.79■□□□□ 0.6
CPNE6-208ENST00000558795 CWC22Q9HCG8 908 aaKnown RBP18.79■□□□□ 0.6
CPNE6-208ENST00000558795 SNRKQ9NRH2 765 aa18.79■□□□□ 0.6
CPNE6-208ENST00000558795 CDK5RAP2Q96SN8 1893 aa18.78■□□□□ 0.6
CPNE6-208ENST00000558795 RGS2P41220 211 aa18.78■□□□□ 0.6
CPNE6-208ENST00000558795 PAGR1Q9BTK6 254 aa18.78■□□□□ 0.6
CPNE6-208ENST00000558795 RBPJLQ9UBG7 517 aa18.78■□□□□ 0.6
CPNE6-208ENST00000558795 ZBTB21Q9ULJ3 1066 aa18.78■□□□□ 0.6
CPNE6-208ENST00000558795 FOCADQ5VW36 1801 aa18.78■□□□□ 0.6
CPNE6-208ENST00000558795 PFASO15067 1338 aa18.77■□□□□ 0.6
CPNE6-208ENST00000558795 HLA-DOAP06340 250 aa18.77■□□□□ 0.6
CPNE6-208ENST00000558795 PPP4CP60510 307 aa18.77■□□□□ 0.6
CPNE6-208ENST00000558795 ERVK-9P63128 1117 aa18.77■□□□□ 0.6
CPNE6-208ENST00000558795 ERVK-24P63145 666 aa18.77■□□□□ 0.6
CPNE6-208ENST00000558795 JAG1P78504 1218 aa18.77■□□□□ 0.6
CPNE6-208ENST00000558795 CACNB2Q08289 660 aaPredicted RBP18.77■□□□□ 0.6
CPNE6-208ENST00000558795 CCDC158Q5M9N0 1113 aa18.77■□□□□ 0.6
CPNE6-208ENST00000558795 ATF7IPQ6VMQ6 1270 aa18.77■□□□□ 0.6
CPNE6-208ENST00000558795 DNAJC18Q9H819 358 aa18.77■□□□□ 0.6
CPNE6-208ENST00000558795 PALD1Q9ULE6 856 aa18.77■□□□□ 0.6
CPNE6-208ENST00000558795 PNMA6EA0A0J9YXQ4 647 aa18.76■□□□□ 0.59
CPNE6-208ENST00000558795 IPO8O15397 1037 aaKnown RBP18.76■□□□□ 0.59
CPNE6-208ENST00000558795 SHROOM1Q2M3G4 852 aaPredicted RBP18.76■□□□□ 0.59
CPNE6-208ENST00000558795 Q3C1V9 767 aa18.76■□□□□ 0.59
CPNE6-208ENST00000558795 USP17L2Q6R6M4 530 aa18.76■□□□□ 0.59
CPNE6-208ENST00000558795 Q7L0L9 218 aa18.76■□□□□ 0.59
CPNE6-208ENST00000558795 GPR142Q7Z601 462 aa18.76■□□□□ 0.59
CPNE6-208ENST00000558795 PLEKHH3Q7Z736 793 aa18.76■□□□□ 0.59
CPNE6-208ENST00000558795 METTL16Q86W50 562 aaKnown RBP18.76■□□□□ 0.59
CPNE6-208ENST00000558795 APBA2Q99767 749 aa18.76■□□□□ 0.59
CPNE6-208ENST00000558795 PORCNQ9H237 461 aa18.76■□□□□ 0.59
CPNE6-208ENST00000558795 SAP30BPQ9UHR5 308 aaKnown RBP18.76■□□□□ 0.59
CPNE6-208ENST00000558795 LAMA3Q16787 3333 aa18.76■□□□□ 0.59
CPNE6-208ENST00000558795 CCND3P30281 292 aaPredicted RBP18.75■□□□□ 0.59
CPNE6-208ENST00000558795 OS9Q13438 667 aaPredicted RBP18.75■□□□□ 0.59
CPNE6-208ENST00000558795 CCL14Q16627 93 aa18.75■□□□□ 0.59
CPNE6-208ENST00000558795 USP6NLQ92738 828 aa18.75■□□□□ 0.59
CPNE6-208ENST00000558795 STXBP5LQ9Y2K9 1186 aa18.75■□□□□ 0.59
CPNE6-208ENST00000558795 GLRX3O76003 335 aaKnown RBP18.74■□□□□ 0.59
CPNE6-208ENST00000558795 COL6A1P12109 1028 aa18.74■□□□□ 0.59
CPNE6-208ENST00000558795 TNNI3KQ59H18 835 aa18.74■□□□□ 0.59
CPNE6-208ENST00000558795 MORN1Q5T089 497 aa18.74■□□□□ 0.59
CPNE6-208ENST00000558795 ADGRA1Q86SQ6 560 aa18.74■□□□□ 0.59
CPNE6-208ENST00000558795 FEZ1Q99689 392 aa18.74■□□□□ 0.59
CPNE6-208ENST00000558795 DBNDD2Q9BQY9 259 aa18.74■□□□□ 0.59
CPNE6-208ENST00000558795 GPR108Q9NPR9 543 aa18.74■□□□□ 0.59
CPNE6-208ENST00000558795 EMILIN3Q9NT22 766 aa18.74■□□□□ 0.59
CPNE6-208ENST00000558795 FPGT-TNNI3KV9GXZ4 949 aa18.74■□□□□ 0.59
CPNE6-208ENST00000558795 IGSF3O75054 1194 aa18.73■□□□□ 0.59
CPNE6-208ENST00000558795 CYP2E1P05181 493 aaPredicted RBP18.73■□□□□ 0.59
CPNE6-208ENST00000558795 TRIM27P14373 513 aa18.73■□□□□ 0.59
CPNE6-208ENST00000558795 CCNA1P78396 465 aa18.73■□□□□ 0.59
CPNE6-208ENST00000558795 LHX8Q68G74 356 aa18.73■□□□□ 0.59
CPNE6-208ENST00000558795 FRAT1Q92837 279 aaPredicted RBP18.73■□□□□ 0.59
CPNE6-208ENST00000558795 MTMR10Q9NXD2 777 aa18.73■□□□□ 0.59
CPNE6-208ENST00000558795 MYO5AQ9Y4I1 1855 aaKnown RBP18.73■□□□□ 0.59
CPNE6-208ENST00000558795 MYH1P12882 1939 aa18.72■□□□□ 0.59
CPNE6-208ENST00000558795 GH2P01242 217 aa18.72■□□□□ 0.59
CPNE6-208ENST00000558795 MDM2Q00987 491 aaPredicted RBP18.72■□□□□ 0.59
CPNE6-208ENST00000558795 MAP2K5Q13163 448 aa18.72■□□□□ 0.59
CPNE6-208ENST00000558795 ZYXQ15942 572 aaKnown RBP18.72■□□□□ 0.59
CPNE6-208ENST00000558795 LRRC26Q2I0M4 334 aa18.72■□□□□ 0.59
CPNE6-208ENST00000558795 WDR78Q5VTH9 848 aa18.72■□□□□ 0.59
CPNE6-208ENST00000558795 MFSD14CQ5VZR4 134 aa18.72■□□□□ 0.59
CPNE6-208ENST00000558795 RABGAP1Q9Y3P9 1069 aa18.72■□□□□ 0.59
CPNE6-208ENST00000558795 FRMPD3Q5JV73 1810 aa18.72■□□□□ 0.59
CPNE6-208ENST00000558795 COL6A3P12111 3177 aa18.71■□□□□ 0.59
CPNE6-208ENST00000558795 USP17L15C9J2P7 530 aa18.71■□□□□ 0.59
CPNE6-208ENST00000558795 USP17L13C9JLJ4 530 aa18.71■□□□□ 0.59
CPNE6-208ENST00000558795 USP17L11C9JVI0 530 aa18.71■□□□□ 0.59
CPNE6-208ENST00000558795 USP17L18D6R9N7 530 aa18.71■□□□□ 0.59
CPNE6-208ENST00000558795 USP17L22D6RA61 530 aa18.71■□□□□ 0.59
CPNE6-208ENST00000558795 USP17L17D6RBQ6 530 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms