RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 GPAMQ9HCL2 828 aa13.02□□□□□ -0.33
MARK3-213ENST00000558611 SOX9P48436 509 aa13.01□□□□□ -0.33
MARK3-213ENST00000558611 TRIM67Q6ZTA4 783 aa13.01□□□□□ -0.33
MARK3-213ENST00000558611 USHBP1Q8N6Y0 703 aa13.01□□□□□ -0.33
MARK3-213ENST00000558611 RHOVQ96L33 236 aa13.01□□□□□ -0.33
MARK3-213ENST00000558611 TCF12Q99081 682 aa13.01□□□□□ -0.33
MARK3-213ENST00000558611 GSX2Q9BZM3 304 aa13.01□□□□□ -0.33
MARK3-213ENST00000558611 AKAP2Q9Y2D5 859 aa13.01□□□□□ -0.33
MARK3-213ENST00000558611 LY75O60449 1722 aa13□□□□□ -0.33
MARK3-213ENST00000558611 K7ELQ4 463 aaPredicted RBP13□□□□□ -0.33
MARK3-213ENST00000558611 MMP20O60882 483 aa13□□□□□ -0.33
MARK3-213ENST00000558611 FAM157BP0CG42 384 aa13□□□□□ -0.33
MARK3-213ENST00000558611 EFHC2Q5JST6 749 aa13□□□□□ -0.33
MARK3-213ENST00000558611 EFR3BQ9Y2G0 817 aa13□□□□□ -0.33
MARK3-213ENST00000558611 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13□□□□□ -0.33
MARK3-213ENST00000558611 PARD3Q8TEW0 1356 aa12.99□□□□□ -0.33
MARK3-213ENST00000558611 KIF4AO95239 1232 aa12.99□□□□□ -0.33
MARK3-213ENST00000558611 SCARF1Q14162 830 aa12.99□□□□□ -0.33
MARK3-213ENST00000558611 JAZF1Q86VZ6 243 aa12.99□□□□□ -0.33
MARK3-213ENST00000558611 CCNJLQ8IV13 435 aa12.99□□□□□ -0.33
MARK3-213ENST00000558611 PHC3Q8NDX5 983 aa12.99□□□□□ -0.33
MARK3-213ENST00000558611 CEP44Q9C0F1 390 aa12.99□□□□□ -0.33
MARK3-213ENST00000558611 EFCC1Q9HA90 598 aa12.99□□□□□ -0.33
MARK3-213ENST00000558611 GINM1Q9NU53 330 aa12.99□□□□□ -0.33
MARK3-213ENST00000558611 SUPT16HQ9Y5B9 1047 aaKnown RBP12.99□□□□□ -0.33
MARK3-213ENST00000558611 EFSO43281 561 aa12.98□□□□□ -0.33
MARK3-213ENST00000558611 TARSP26639 723 aaKnown RBP12.98□□□□□ -0.33
MARK3-213ENST00000558611 SOX18P35713 384 aa12.98□□□□□ -0.33
MARK3-213ENST00000558611 EIF4A2Q14240 407 aaKnown RBP12.98□□□□□ -0.33
MARK3-213ENST00000558611 CC2D1BQ5T0F9 858 aaKnown RBP12.98□□□□□ -0.33
MARK3-213ENST00000558611 FIGNL1Q6PIW4 674 aa12.98□□□□□ -0.33
MARK3-213ENST00000558611 RAPGEF4Q8WZA2 1011 aa12.98□□□□□ -0.33
MARK3-213ENST00000558611 SIRPGQ9P1W8 387 aa12.98□□□□□ -0.33
MARK3-213ENST00000558611 F6X3S4 739 aa12.97□□□□□ -0.33
MARK3-213ENST00000558611 GREM1O60565 184 aa12.97□□□□□ -0.33
MARK3-213ENST00000558611 APBA3O96018 575 aa12.97□□□□□ -0.33
MARK3-213ENST00000558611 RARAP10276 462 aa12.97□□□□□ -0.33
MARK3-213ENST00000558611 FBXL19Q6PCT2 694 aa12.97□□□□□ -0.33
MARK3-213ENST00000558611 KRT25Q7Z3Z0 450 aa12.97□□□□□ -0.33
MARK3-213ENST00000558611 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.97□□□□□ -0.33
MARK3-213ENST00000558611 HOXD8P13378 290 aaPredicted RBP12.96□□□□□ -0.33
MARK3-213ENST00000558611 LIG3P49916 1009 aa12.96□□□□□ -0.33
MARK3-213ENST00000558611 LAMC2Q13753 1193 aa12.96□□□□□ -0.33
MARK3-213ENST00000558611 ZCRB1Q8TBF4 217 aaKnown RBP12.96□□□□□ -0.33
MARK3-213ENST00000558611 ZKSCAN3Q9BRR0 538 aa12.96□□□□□ -0.33
MARK3-213ENST00000558611 SCN11AQ9UI33 1791 aa12.96□□□□□ -0.34
MARK3-213ENST00000558611 PLEKHG2Q9H7P9 1386 aa12.95□□□□□ -0.34
MARK3-213ENST00000558611 TAF1LQ8IZX4 1826 aa12.95□□□□□ -0.34
MARK3-213ENST00000558611 IGSF1Q8N6C5 1336 aa12.95□□□□□ -0.34
MARK3-213ENST00000558611 FIGNL2A6NMB9 653 aa12.95□□□□□ -0.34
MARK3-213ENST00000558611 GARTP22102 1010 aa12.95□□□□□ -0.34
MARK3-213ENST00000558611 ZEB1P37275 1124 aaPredicted RBP12.95□□□□□ -0.34
MARK3-213ENST00000558611 LMNB2Q03252 620 aa12.95□□□□□ -0.34
MARK3-213ENST00000558611 SFSWAPQ12872 951 aaKnown RBP12.95□□□□□ -0.34
MARK3-213ENST00000558611 EZH2Q15910 746 aaKnown RBP12.95□□□□□ -0.34
MARK3-213ENST00000558611 NCAPG2Q86XI2 1143 aa12.95□□□□□ -0.34
MARK3-213ENST00000558611 DDX54Q8TDD1 881 aaKnown RBP12.95□□□□□ -0.34
MARK3-213ENST00000558611 CNTNAP3BQ96NU0 1288 aa12.95□□□□□ -0.34
MARK3-213ENST00000558611 CAMKK2Q96RR4 588 aa12.95□□□□□ -0.34
MARK3-213ENST00000558611 OSMRQ99650 979 aa12.95□□□□□ -0.34
MARK3-213ENST00000558611 CNTNAP3Q9BZ76 1288 aa12.95□□□□□ -0.34
MARK3-213ENST00000558611 TLR7Q9NYK1 1049 aaKnown RBP12.95□□□□□ -0.34
MARK3-213ENST00000558611 COL3A1P02461 1466 aaPredicted RBP12.95□□□□□ -0.34
MARK3-213ENST00000558611 TUBGCP6Q96RT7 1819 aa12.95□□□□□ -0.34
MARK3-213ENST00000558611 PCDH11XQ9BZA7 1347 aa12.94□□□□□ -0.34
MARK3-213ENST00000558611 PCDH11YQ9BZA8 1340 aa12.94□□□□□ -0.34
MARK3-213ENST00000558611 ATXN7O15265 892 aaPredicted RBP12.94□□□□□ -0.34
MARK3-213ENST00000558611 FBXO24O75426 580 aa12.94□□□□□ -0.34
MARK3-213ENST00000558611 PSAPP07602 524 aa12.94□□□□□ -0.34
MARK3-213ENST00000558611 ITPKAP23677 461 aa12.94□□□□□ -0.34
MARK3-213ENST00000558611 HSD3B2P26439 372 aa12.94□□□□□ -0.34
MARK3-213ENST00000558611 ETFBP38117 255 aa12.94□□□□□ -0.34
MARK3-213ENST00000558611 HYAL2Q12891 473 aa12.94□□□□□ -0.34
MARK3-213ENST00000558611 MAP3K11Q16584 847 aa12.94□□□□□ -0.34
MARK3-213ENST00000558611 TPTE2Q6XPS3 522 aa12.94□□□□□ -0.34
MARK3-213ENST00000558611 ANKS3Q6ZW76 656 aa12.94□□□□□ -0.34
MARK3-213ENST00000558611 PTF1AQ7RTS3 328 aa12.94□□□□□ -0.34
MARK3-213ENST00000558611 GAS2L1Q99501 681 aaPredicted RBP12.94□□□□□ -0.34
MARK3-213ENST00000558611 ZFATQ9P243 1243 aa12.94□□□□□ -0.34
MARK3-213ENST00000558611 PAPPAQ13219 1627 aa12.94□□□□□ -0.34
MARK3-213ENST00000558611 QSER1Q2KHR3 1735 aa12.93□□□□□ -0.34
MARK3-213ENST00000558611 CLSTN1O94985 981 aa12.93□□□□□ -0.34
MARK3-213ENST00000558611 MTHFSP49914 203 aa12.93□□□□□ -0.34
MARK3-213ENST00000558611 TCEAL1Q15170 157 aa12.93□□□□□ -0.34
MARK3-213ENST00000558611 ACSBG1Q96GR2 724 aa12.93□□□□□ -0.34
MARK3-213ENST00000558611 SPACA7Q96KW9 195 aa12.93□□□□□ -0.34
MARK3-213ENST00000558611 PNMA5Q96PV4 448 aa12.93□□□□□ -0.34
MARK3-213ENST00000558611 PCDHGC4Q9Y5F7 938 aa12.93□□□□□ -0.34
MARK3-213ENST00000558611 PLSCR1O15162 318 aa12.92□□□□□ -0.34
MARK3-213ENST00000558611 KLF4O43474 513 aa12.92□□□□□ -0.34
MARK3-213ENST00000558611 KCNQ2O43526 872 aa12.92□□□□□ -0.34
MARK3-213ENST00000558611 MAP3K6O95382 1288 aa12.92□□□□□ -0.34
MARK3-213ENST00000558611 PF4P02776 101 aa12.92□□□□□ -0.34
MARK3-213ENST00000558611 CAMK2GQ13555 558 aaPredicted RBP12.92□□□□□ -0.34
MARK3-213ENST00000558611 CNGB1Q14028 1251 aaPredicted RBP12.92□□□□□ -0.34
MARK3-213ENST00000558611 RAB33AQ14088 237 aa12.92□□□□□ -0.34
MARK3-213ENST00000558611 TRIM55Q9BYV6 548 aa12.92□□□□□ -0.34
MARK3-213ENST00000558611 TLR6Q9Y2C9 796 aa12.92□□□□□ -0.34
MARK3-213ENST00000558611 MRPL42Q9Y6G3 142 aaKnown RBP12.92□□□□□ -0.34
MARK3-213ENST00000558611 C5P01031 1676 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms