RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 SMARCE1Q969G3 411 aa6.24□□□□□ -1.41
GABPB1-207ENST00000558335 CCDC51Q96ER9 411 aa6.24□□□□□ -1.41
GABPB1-207ENST00000558335 XAGE2Q96GT9 111 aa6.24□□□□□ -1.41
GABPB1-207ENST00000558335 DRC1Q96MC2 740 aa6.24□□□□□ -1.41
GABPB1-207ENST00000558335 AGAP3Q96P47 875 aa6.24□□□□□ -1.41
GABPB1-207ENST00000558335 FOXP1Q9H334 677 aaPredicted RBP6.24□□□□□ -1.41
GABPB1-207ENST00000558335 SPATS2LQ9NUQ6 558 aaKnown RBP6.24□□□□□ -1.41
GABPB1-207ENST00000558335 GOLGA6AQ9NYA3 693 aa6.24□□□□□ -1.41
GABPB1-207ENST00000558335 TMOD3Q9NYL9 352 aa6.24□□□□□ -1.41
GABPB1-207ENST00000558335 TUBE1Q9UJT0 475 aa6.24□□□□□ -1.41
GABPB1-207ENST00000558335 AXIN2Q9Y2T1 843 aa6.24□□□□□ -1.41
GABPB1-207ENST00000558335 CHD4Q14839 1912 aa6.24□□□□□ -1.41
GABPB1-207ENST00000558335 C4AP0C0L4 1744 aa6.24□□□□□ -1.41
GABPB1-207ENST00000558335 C4BP0C0L5 1744 aa6.24□□□□□ -1.41
GABPB1-207ENST00000558335 EFCAB8A8MWE9 144 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 ATP5J2-PTCD1G3V325 749 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 RGL2O15211 777 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 CYP27B1O15528 508 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 GPAA1O43292 621 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 PTCD1O75127 700 aaKnown RBP6.23□□□□□ -1.41
GABPB1-207ENST00000558335 DEXIO95424 95 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 CTDNEP1O95476 244 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 FGAP02671 866 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 TOP1P11387 765 aaKnown RBP6.23□□□□□ -1.41
GABPB1-207ENST00000558335 SLC5A1P13866 664 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 ERCC5P28715 1186 aaPredicted RBP6.23□□□□□ -1.41
GABPB1-207ENST00000558335 ADD2P35612 726 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 UBASH3AP57075 661 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 ETF1P62495 437 aaKnown RBP6.23□□□□□ -1.41
GABPB1-207ENST00000558335 CCT2P78371 535 aaKnown RBP6.23□□□□□ -1.41
GABPB1-207ENST00000558335 KIF23Q02241 960 aaPredicted RBP6.23□□□□□ -1.41
GABPB1-207ENST00000558335 SPAG1Q07617 926 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 NCBP1Q09161 790 aaKnown RBP6.23□□□□□ -1.41
GABPB1-207ENST00000558335 TRIM14Q14142 442 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 CRYMQ14894 314 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 PUM3Q15397 648 aaKnown RBP6.23□□□□□ -1.41
GABPB1-207ENST00000558335 METTL24Q5JXM2 366 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 RESP18Q5W5W9 173 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 NFXL1Q6ZNB6 911 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 TOM1L2Q6ZVM7 507 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 SDCCAG8Q86SQ7 713 aaPredicted RBP6.23□□□□□ -1.41
GABPB1-207ENST00000558335 KIAA1328Q86T90 577 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 SRLQ86TD4 932 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 ANKRD18AQ8IVF6 992 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 CNNM3Q8NE01 707 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 ARMC2Q8NEN0 867 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 LPIN2Q92539 896 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 UBXN4Q92575 508 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 TATDN2Q93075 761 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 FERMT2Q96AC1 680 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 AIDAQ96BJ3 306 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 IQCDQ96DY2 449 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 ALG1Q9BT22 464 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 CDCA7Q9BWT1 371 aaPredicted RBP6.23□□□□□ -1.41
GABPB1-207ENST00000558335 GBP3Q9H0R5 595 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 ACBD3Q9H3P7 528 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 L2HGDHQ9H9P8 463 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 CNNM1Q9NRU3 951 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 GNL3LQ9NVN8 582 aaKnown RBP6.23□□□□□ -1.41
GABPB1-207ENST00000558335 UTP6Q9NYH9 597 aaKnown RBP6.23□□□□□ -1.41
GABPB1-207ENST00000558335 DNAI1Q9UI46 699 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 SLC12A7Q9Y666 1083 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 KCPQ6ZWJ8 1503 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 GLI3P10071 1580 aa6.23□□□□□ -1.41
GABPB1-207ENST00000558335 TIAM2Q8IVF5 1701 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 COL22A1Q8NFW1 1626 aaPredicted RBP6.22□□□□□ -1.41
GABPB1-207ENST00000558335 PRAMEF22A3QJZ6 481 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 AP5Z1O43299 807 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 PDE8AO60658 829 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 RPS6KA5O75582 802 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 FMNL1O95466 1100 aaPredicted RBP6.22□□□□□ -1.41
GABPB1-207ENST00000558335 PFKFB1P16118 471 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 IFNAR1P17181 557 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 PPP1R2P41236 205 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 NDUFA8P51970 172 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 TIMM10P62072 90 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 CCZ1BP86790 482 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 CCZ1P86791 482 aaPredicted RBP6.22□□□□□ -1.41
GABPB1-207ENST00000558335 FANCCQ00597 558 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 CEBPZQ03701 1054 aaKnown RBP6.22□□□□□ -1.41
GABPB1-207ENST00000558335 PDIA5Q14554 519 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 CFAP100Q494V2 611 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 PARP10Q53GL7 1025 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 CCDC178Q5BJE1 867 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 FAM173BQ6P4H8 233 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 TMCO3Q6UWJ1 677 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 GIGYF2Q6Y7W6 1299 aaKnown RBP6.22□□□□□ -1.41
GABPB1-207ENST00000558335 LDHAL6AQ6ZMR3 332 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 CCDC129Q6ZRS4 1044 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 MFSD6Q6ZSS7 791 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 C11orf57Q6ZUT1 292 aaPredicted RBP6.22□□□□□ -1.41
GABPB1-207ENST00000558335 STOX1Q6ZVD7 989 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 TMC6Q7Z403 805 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 DZIP3Q86Y13 1208 aaKnown RBP6.22□□□□□ -1.41
GABPB1-207ENST00000558335 RBM12BQ8IXT5 1001 aaKnown RBP6.22□□□□□ -1.41
GABPB1-207ENST00000558335 TEX11Q8IYF3 940 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 C10orf67Q8IYJ2 551 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 NBPF15Q8N660 670 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 KLHDC4Q8TBB5 520 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 ENOX1Q8TC92 643 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms