RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 FAM87AP0C7U9 286 aa5.88□□□□□ -1.47
LRRC28-205ENST00000558248 TCF3P15923 654 aa5.88□□□□□ -1.47
LRRC28-205ENST00000558248 ZNF326Q5BKZ1 582 aaKnown RBP5.88□□□□□ -1.47
LRRC28-205ENST00000558248 PPM1JQ5JR12 505 aa5.88□□□□□ -1.47
LRRC28-205ENST00000558248 MPRIPQ6WCQ1 1025 aa5.88□□□□□ -1.47
LRRC28-205ENST00000558248 ARHGAP27Q6ZUM4 889 aa5.88□□□□□ -1.47
LRRC28-205ENST00000558248 DHX37Q8IY37 1157 aaKnown RBP5.88□□□□□ -1.47
LRRC28-205ENST00000558248 DRC1Q96MC2 740 aa5.88□□□□□ -1.47
LRRC28-205ENST00000558248 NOC4LQ9BVI4 516 aaKnown RBP5.88□□□□□ -1.47
LRRC28-205ENST00000558248 BCL2L13Q9BXK5 485 aa5.88□□□□□ -1.47
LRRC28-205ENST00000558248 MIR1-1HGQ9H1L0 117 aa5.88□□□□□ -1.47
LRRC28-205ENST00000558248 CSADQ9Y600 493 aa5.88□□□□□ -1.47
LRRC28-205ENST00000558248 WRNQ14191 1432 aaPredicted RBP eCLIP5.88□□□□□ -1.47
LRRC28-205ENST00000558248 RUSC2Q8N2Y8 1516 aa5.88□□□□□ -1.47
LRRC28-205ENST00000558248 KIF21BO75037 1637 aa5.88□□□□□ -1.47
LRRC28-205ENST00000558248 MAP3K4Q9Y6R4 1608 aa5.88□□□□□ -1.47
LRRC28-205ENST00000558248 PRAMEF27A3QJZ7 478 aa5.87□□□□□ -1.47
LRRC28-205ENST00000558248 MED26O95402 600 aa5.87□□□□□ -1.47
LRRC28-205ENST00000558248 NEFMP07197 916 aa5.87□□□□□ -1.47
LRRC28-205ENST00000558248 HOXA10P31260 410 aaPredicted RBP5.87□□□□□ -1.47
LRRC28-205ENST00000558248 LIG3P49916 1009 aa5.87□□□□□ -1.47
LRRC28-205ENST00000558248 MAP3K11Q16584 847 aa5.87□□□□□ -1.47
LRRC28-205ENST00000558248 ZBTB37Q5TC79 503 aa5.87□□□□□ -1.47
LRRC28-205ENST00000558248 MEI1Q5TIA1 1274 aa5.87□□□□□ -1.47
LRRC28-205ENST00000558248 VSIG10LQ86VR7 867 aa5.87□□□□□ -1.47
LRRC28-205ENST00000558248 C12orf40Q86WS4 652 aa5.87□□□□□ -1.47
LRRC28-205ENST00000558248 ANKRD13AQ8IZ07 590 aa5.87□□□□□ -1.47
LRRC28-205ENST00000558248 FAM161BQ96MY7 647 aa5.87□□□□□ -1.47
LRRC28-205ENST00000558248 KRTAP4-8Q9BYQ9 185 aa5.87□□□□□ -1.47
LRRC28-205ENST00000558248 RNF19AQ9NV58 838 aa5.87□□□□□ -1.47
LRRC28-205ENST00000558248 BSDC1Q9NW68 430 aaPredicted RBP5.87□□□□□ -1.47
LRRC28-205ENST00000558248 ERICH3Q5RHP9 1530 aa5.87□□□□□ -1.47
LRRC28-205ENST00000558248 ADAMTSL3P82987 1691 aa5.86□□□□□ -1.47
LRRC28-205ENST00000558248 GP2P55259 537 aaKnown RBP5.86□□□□□ -1.47
LRRC28-205ENST00000558248 MSMPQ1L6U9 139 aa5.86□□□□□ -1.47
LRRC28-205ENST00000558248 RASIP1Q5U651 963 aa5.86□□□□□ -1.47
LRRC28-205ENST00000558248 AGMOQ6ZNB7 445 aa5.86□□□□□ -1.47
LRRC28-205ENST00000558248 SHISA5Q8N114 240 aa5.86□□□□□ -1.47
LRRC28-205ENST00000558248 ZNF507Q8TCN5 953 aa5.86□□□□□ -1.47
LRRC28-205ENST00000558248 KIAA1522Q9P206 1035 aaPredicted RBP5.86□□□□□ -1.47
LRRC28-205ENST00000558248 SNCAIPQ9Y6H5 919 aa5.86□□□□□ -1.47
LRRC28-205ENST00000558248 CUL7Q14999 1698 aa5.85□□□□□ -1.47
LRRC28-205ENST00000558248 KIAA0586Q9BVV6 1533 aa5.85□□□□□ -1.47
LRRC28-205ENST00000558248 ETF1P62495 437 aaKnown RBP5.85□□□□□ -1.47
LRRC28-205ENST00000558248 WIPI1Q5MNZ9 446 aaPredicted RBP5.85□□□□□ -1.47
LRRC28-205ENST00000558248 TOP6BLQ8N6T0 577 aa5.85□□□□□ -1.47
LRRC28-205ENST00000558248 GAL3ST3Q96A11 431 aa5.85□□□□□ -1.47
LRRC28-205ENST00000558248 PLPPR2Q96GM1 343 aa5.85□□□□□ -1.47
LRRC28-205ENST00000558248 FBXL18Q96ME1 805 aa5.85□□□□□ -1.47
LRRC28-205ENST00000558248 DUSP23Q9BVJ7 150 aa5.85□□□□□ -1.47
LRRC28-205ENST00000558248 GTF2IRD1Q9UHL9 959 aa5.85□□□□□ -1.47
LRRC28-205ENST00000558248 USP31Q70CQ4 1352 aa5.84□□□□□ -1.47
LRRC28-205ENST00000558248 TNIKQ9UKE5 1360 aa5.84□□□□□ -1.47
LRRC28-205ENST00000558248 ARID4BQ4LE39 1312 aaPredicted RBP5.84□□□□□ -1.47
LRRC28-205ENST00000558248 SMARCA5O60264 1052 aaPredicted RBP5.84□□□□□ -1.47
LRRC28-205ENST00000558248 PRNPP04156 253 aa5.84□□□□□ -1.47
LRRC28-205ENST00000558248 PWP1Q13610 501 aa5.84□□□□□ -1.47
LRRC28-205ENST00000558248 SEPT6Q14141 434 aa5.84□□□□□ -1.47
LRRC28-205ENST00000558248 LRFN4Q6PJG9 635 aa5.84□□□□□ -1.47
LRRC28-205ENST00000558248 STK11IPQ8N1F8 1099 aa5.84□□□□□ -1.47
LRRC28-205ENST00000558248 GIPC2Q8TF65 315 aa5.84□□□□□ -1.47
LRRC28-205ENST00000558248 CWC22Q9HCG8 908 aaKnown RBP5.84□□□□□ -1.47
LRRC28-205ENST00000558248 UHRF1BP1LA0JNW5 1464 aa5.83□□□□□ -1.48
LRRC28-205ENST00000558248 UACAQ9BZF9 1416 aa5.83□□□□□ -1.48
LRRC28-205ENST00000558248 LRIG2O94898 1065 aa5.83□□□□□ -1.48
LRRC28-205ENST00000558248 BPNT1O95861 308 aa5.83□□□□□ -1.48
LRRC28-205ENST00000558248 IRAK1P51617 712 aa5.83□□□□□ -1.48
LRRC28-205ENST00000558248 RING1Q06587 406 aa5.83□□□□□ -1.48
LRRC28-205ENST00000558248 PDE4BQ07343 736 aa5.83□□□□□ -1.48
LRRC28-205ENST00000558248 INPP5AQ14642 412 aa5.83□□□□□ -1.48
LRRC28-205ENST00000558248 SF3A1Q15459 793 aaKnown RBP5.83□□□□□ -1.48
LRRC28-205ENST00000558248 TSNAXIP1Q2TAA8 658 aa5.83□□□□□ -1.48
LRRC28-205ENST00000558248 ARMCX6Q7L4S7 300 aa5.83□□□□□ -1.48
LRRC28-205ENST00000558248 CYFIP1Q7L576 1253 aa5.83□□□□□ -1.48
LRRC28-205ENST00000558248 TP53INP2Q8IXH6 220 aa5.83□□□□□ -1.48
LRRC28-205ENST00000558248 AGBL5Q8NDL9 886 aa5.83□□□□□ -1.48
LRRC28-205ENST00000558248 UBXN4Q92575 508 aa5.83□□□□□ -1.48
LRRC28-205ENST00000558248 MISP3Q96FF7 219 aa5.83□□□□□ -1.48
LRRC28-205ENST00000558248 WNT10AQ9GZT5 417 aa5.83□□□□□ -1.48
LRRC28-205ENST00000558248 PRDM10Q9NQV6 1147 aa5.83□□□□□ -1.48
LRRC28-205ENST00000558248 CCDC39Q9UFE4 941 aa5.83□□□□□ -1.48
LRRC28-205ENST00000558248 ZC3H7BQ9UGR2 993 aaKnown RBP5.83□□□□□ -1.48
LRRC28-205ENST00000558248 TACC3Q9Y6A5 838 aa5.83□□□□□ -1.48
LRRC28-205ENST00000558248 CD109Q6YHK3 1445 aa5.82□□□□□ -1.48
LRRC28-205ENST00000558248 CTSHP09668 335 aa5.82□□□□□ -1.48
LRRC28-205ENST00000558248 NTF4P34130 210 aa5.82□□□□□ -1.48
LRRC28-205ENST00000558248 ZC3H6P61129 1189 aaKnown RBP5.82□□□□□ -1.48
LRRC28-205ENST00000558248 PTPN11Q06124 597 aaPredicted RBP5.82□□□□□ -1.48
LRRC28-205ENST00000558248 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.82□□□□□ -1.48
LRRC28-205ENST00000558248 CCDC84Q86UT8 332 aaPredicted RBP5.82□□□□□ -1.48
LRRC28-205ENST00000558248 RELL1Q8IUW5 271 aa5.82□□□□□ -1.48
LRRC28-205ENST00000558248 HID1Q8IV36 788 aa5.82□□□□□ -1.48
LRRC28-205ENST00000558248 FLCNQ8NFG4 579 aa5.82□□□□□ -1.48
LRRC28-205ENST00000558248 NETO1Q8TDF5 533 aa5.82□□□□□ -1.48
LRRC28-205ENST00000558248 PSMG3-AS1Q96PY0 264 aa5.82□□□□□ -1.48
LRRC28-205ENST00000558248 MKNK2Q9HBH9 465 aa5.82□□□□□ -1.48
LRRC28-205ENST00000558248 SLC5A6Q9Y289 635 aa5.82□□□□□ -1.48
LRRC28-205ENST00000558248 PCDHB5Q9Y5E4 795 aa5.82□□□□□ -1.48
LRRC28-205ENST00000558248 KDM5BQ9UGL1 1544 aa5.82□□□□□ -1.48
LRRC28-205ENST00000558248 MAGI3Q5TCQ9 1506 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms