RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 MANSC4A6NHS7 340 aaPredicted RBP17.1■□□□□ 0.33
USP3-205ENST00000557884 MPHOSPH10O00566 681 aaKnown RBP17.1■□□□□ 0.33
USP3-205ENST00000557884 FGAP02671 866 aa17.1■□□□□ 0.33
USP3-205ENST00000557884 ABCB5Q2M3G0 1257 aa17.1■□□□□ 0.33
USP3-205ENST00000557884 C16orf86Q6ZW13 317 aa17.1■□□□□ 0.33
USP3-205ENST00000557884 RUFY2Q8WXA3 655 aa17.1■□□□□ 0.33
USP3-205ENST00000557884 ZBTB21Q9ULJ3 1066 aa17.1■□□□□ 0.33
USP3-205ENST00000557884 MYH1P12882 1939 aa17.09■□□□□ 0.33
USP3-205ENST00000557884 TRIM75PA6NK02 468 aa17.09■□□□□ 0.33
USP3-205ENST00000557884 ASNSP08243 561 aa17.09■□□□□ 0.33
USP3-205ENST00000557884 MAP2K1Q02750 393 aaPredicted RBP17.09■□□□□ 0.33
USP3-205ENST00000557884 PPARAQ07869 468 aa17.09■□□□□ 0.33
USP3-205ENST00000557884 SREBF2Q12772 1141 aa17.09■□□□□ 0.33
USP3-205ENST00000557884 ALX1Q15699 326 aa17.09■□□□□ 0.33
USP3-205ENST00000557884 MS4A4AQ96JQ5 239 aa17.09■□□□□ 0.33
USP3-205ENST00000557884 RAD50Q92878 1312 aa17.09■□□□□ 0.33
USP3-205ENST00000557884 THSD7BQ9C0I4 1608 aa17.08■□□□□ 0.32
USP3-205ENST00000557884 CCL15-CCL14A0A0B4J2E2 113 aa17.08■□□□□ 0.32
USP3-205ENST00000557884 USP17L5A8MUK1 530 aa17.08■□□□□ 0.32
USP3-205ENST00000557884 PRDM1O75626 825 aa17.08■□□□□ 0.32
USP3-205ENST00000557884 HSPA1AP0DMV8 641 aaKnown RBP17.08■□□□□ 0.32
USP3-205ENST00000557884 HSPA1BP0DMV9 641 aaKnown RBP17.08■□□□□ 0.32
USP3-205ENST00000557884 AKR1B1P15121 316 aa17.08■□□□□ 0.32
USP3-205ENST00000557884 GTF2A2P52657 109 aa17.08■□□□□ 0.32
USP3-205ENST00000557884 CTDSPL2Q05D32 466 aa17.08■□□□□ 0.32
USP3-205ENST00000557884 SNAPC2Q13487 334 aa17.08■□□□□ 0.32
USP3-205ENST00000557884 RAB3GAP1Q15042 981 aa17.08■□□□□ 0.32
USP3-205ENST00000557884 CCL15Q16663 113 aa17.08■□□□□ 0.32
USP3-205ENST00000557884 BRI3BPQ8WY22 251 aa17.08■□□□□ 0.32
USP3-205ENST00000557884 MKNK2Q9HBH9 465 aa17.08■□□□□ 0.32
USP3-205ENST00000557884 CABP5Q9NP86 173 aa17.08■□□□□ 0.32
USP3-205ENST00000557884 WBP1LQ9NX94 342 aa17.08■□□□□ 0.32
USP3-205ENST00000557884 AFG3L2Q9Y4W6 797 aa17.08■□□□□ 0.32
USP3-205ENST00000557884 ROBO3Q96MS0 1386 aa17.07■□□□□ 0.32
USP3-205ENST00000557884 SGSM2O43147 1006 aa17.07■□□□□ 0.32
USP3-205ENST00000557884 HAND2P61296 217 aa17.07■□□□□ 0.32
USP3-205ENST00000557884 SPP2Q13103 211 aa17.07■□□□□ 0.32
USP3-205ENST00000557884 BEGAINQ9BUH8 593 aa17.07■□□□□ 0.32
USP3-205ENST00000557884 KCNH4Q9UQ05 1017 aa17.07■□□□□ 0.32
USP3-205ENST00000557884 BAZ2AQ9UIF9 1905 aaKnown RBP17.06■□□□□ 0.32
USP3-205ENST00000557884 IGF2BP3O00425 579 aaKnown RBP eCLIP17.06■□□□□ 0.32
USP3-205ENST00000557884 CDC45O75419 566 aa17.06■□□□□ 0.32
USP3-205ENST00000557884 SLC3A2P08195 630 aaKnown RBP17.06■□□□□ 0.32
USP3-205ENST00000557884 RASA1P20936 1047 aa17.06■□□□□ 0.32
USP3-205ENST00000557884 TM4SF4P48230 202 aa17.06■□□□□ 0.32
USP3-205ENST00000557884 SEPT2Q15019 361 aa17.06■□□□□ 0.32
USP3-205ENST00000557884 REM2Q8IYK8 340 aaPredicted RBP17.06■□□□□ 0.32
USP3-205ENST00000557884 ZNF280CQ8ND82 737 aa17.06■□□□□ 0.32
USP3-205ENST00000557884 PTPN18Q99952 460 aa17.06■□□□□ 0.32
USP3-205ENST00000557884 DSCC1Q9BVC3 393 aa17.06■□□□□ 0.32
USP3-205ENST00000557884 INCENPQ9NQS7 918 aa17.06■□□□□ 0.32
USP3-205ENST00000557884 GINM1Q9NU53 330 aa17.06■□□□□ 0.32
USP3-205ENST00000557884 TSKSQ9UJT2 592 aa17.06■□□□□ 0.32
USP3-205ENST00000557884 ZMYM6O95789 1325 aa17.05■□□□□ 0.32
USP3-205ENST00000557884 CXCL11O14625 94 aa17.05■□□□□ 0.32
USP3-205ENST00000557884 TRPA1O75762 1119 aa17.05■□□□□ 0.32
USP3-205ENST00000557884 CETPP11597 493 aa17.05■□□□□ 0.32
USP3-205ENST00000557884 GUCY1A2P33402 732 aa17.05■□□□□ 0.32
USP3-205ENST00000557884 PTH1RQ03431 593 aa17.05■□□□□ 0.32
USP3-205ENST00000557884 PDE4BQ07343 736 aa17.05■□□□□ 0.32
USP3-205ENST00000557884 IFNL1Q8IU54 200 aa17.05■□□□□ 0.32
USP3-205ENST00000557884 CLEC10AQ8IUN9 316 aa17.05■□□□□ 0.32
USP3-205ENST00000557884 ESYT1Q9BSJ8 1104 aa17.05■□□□□ 0.32
USP3-205ENST00000557884 AS3MTQ9HBK9 375 aa17.05■□□□□ 0.32
USP3-205ENST00000557884 RNF186Q9NXI6 227 aa17.05■□□□□ 0.32
USP3-205ENST00000557884 TAOK2Q9UL54 1235 aa17.05■□□□□ 0.32
USP3-205ENST00000557884 TACC3Q9Y6A5 838 aa17.05■□□□□ 0.32
USP3-205ENST00000557884 A0A0G2JLL6 359 aaPredicted RBP17.04■□□□□ 0.32
USP3-205ENST00000557884 TESPA1A2RU30 521 aaPredicted RBP17.04■□□□□ 0.32
USP3-205ENST00000557884 INHBEP58166 350 aa17.04■□□□□ 0.32
USP3-205ENST00000557884 DGKZQ13574 1117 aa17.04■□□□□ 0.32
USP3-205ENST00000557884 MTMR2Q13614 643 aa17.04■□□□□ 0.32
USP3-205ENST00000557884 GADL1Q6ZQY3 521 aa17.04■□□□□ 0.32
USP3-205ENST00000557884 TMEM179Q6ZVK1 233 aa17.04■□□□□ 0.32
USP3-205ENST00000557884 PRRT2Q7Z6L0 340 aaPredicted RBP17.04■□□□□ 0.32
USP3-205ENST00000557884 ACER1Q8TDN7 264 aa17.04■□□□□ 0.32
USP3-205ENST00000557884 CCDC17Q96LX7 622 aa17.04■□□□□ 0.32
USP3-205ENST00000557884 WDR18Q9BV38 432 aa17.04■□□□□ 0.32
USP3-205ENST00000557884 ANAPC4Q9UJX5 808 aa17.04■□□□□ 0.32
USP3-205ENST00000557884 DOCK1Q14185 1865 aa17.03■□□□□ 0.32
USP3-205ENST00000557884 BTBD19C9JJ37 291 aa17.03■□□□□ 0.32
USP3-205ENST00000557884 FOXN1O15353 648 aa17.03■□□□□ 0.32
USP3-205ENST00000557884 HMGCS2P54868 508 aa17.03■□□□□ 0.32
USP3-205ENST00000557884 MOGSQ13724 837 aa17.03■□□□□ 0.32
USP3-205ENST00000557884 ZYXQ15942 572 aaKnown RBP17.03■□□□□ 0.32
USP3-205ENST00000557884 FAM47AQ5JRC9 791 aa17.03■□□□□ 0.32
USP3-205ENST00000557884 CASC1Q6TDU7 716 aa17.03■□□□□ 0.32
USP3-205ENST00000557884 TBC1D10CQ8IV04 446 aa17.03■□□□□ 0.32
USP3-205ENST00000557884 ZNF444Q8N0Y2 327 aaPredicted RBP17.03■□□□□ 0.32
USP3-205ENST00000557884 FAM43AQ8N2R8 423 aa17.03■□□□□ 0.32
USP3-205ENST00000557884 FEZ1Q99689 392 aa17.03■□□□□ 0.32
USP3-205ENST00000557884 TBC1D2Q9BYX2 928 aa17.03■□□□□ 0.32
USP3-205ENST00000557884 ZNF287Q9HBT7 754 aa17.03■□□□□ 0.32
USP3-205ENST00000557884 TOMM22Q9NS69 142 aa17.03■□□□□ 0.32
USP3-205ENST00000557884 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.03■□□□□ 0.32
USP3-205ENST00000557884 ZNF213O14771 459 aa17.02■□□□□ 0.32
USP3-205ENST00000557884 ATP2B2Q01814 1243 aa17.02■□□□□ 0.32
USP3-205ENST00000557884 ICA1Q05084 483 aa17.02■□□□□ 0.32
USP3-205ENST00000557884 RRP12Q5JTH9 1297 aaKnown RBP17.02■□□□□ 0.32
USP3-205ENST00000557884 KIAA1211Q6ZU35 1233 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms