RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 GMCL1Q96IK5 515 aa9.14□□□□□ -0.95
ZEB1-210ENST00000557827 MRPL4Q9BYD3 311 aaKnown RBP9.14□□□□□ -0.95
ZEB1-210ENST00000557827 PHLDB1Q86UU1 1377 aa9.13□□□□□ -0.95
ZEB1-210ENST00000557827 CREB3O43889 395 aa9.13□□□□□ -0.95
ZEB1-210ENST00000557827 SCGB1D2O95969 90 aa9.13□□□□□ -0.95
ZEB1-210ENST00000557827 CPB1P15086 417 aa9.13□□□□□ -0.95
ZEB1-210ENST00000557827 HSP90AA2PQ14568 343 aaPredicted RBP9.13□□□□□ -0.95
ZEB1-210ENST00000557827 C14orf80Q86SX3 495 aa9.13□□□□□ -0.95
ZEB1-210ENST00000557827 FAM35AQ86V20 835 aa9.13□□□□□ -0.95
ZEB1-210ENST00000557827 ATXN7L1Q9ULK2 861 aaPredicted RBP9.13□□□□□ -0.95
ZEB1-210ENST00000557827 TRIM33Q9UPN9 1127 aa9.13□□□□□ -0.95
ZEB1-210ENST00000557827 TACC3Q9Y6A5 838 aa9.13□□□□□ -0.95
ZEB1-210ENST00000557827 FAM177BA6PVY3 158 aa9.12□□□□□ -0.95
ZEB1-210ENST00000557827 PLIN1O60240 522 aa9.12□□□□□ -0.95
ZEB1-210ENST00000557827 KRT18P05783 430 aaKnown RBP9.12□□□□□ -0.95
ZEB1-210ENST00000557827 PDE4BQ07343 736 aa9.12□□□□□ -0.95
ZEB1-210ENST00000557827 TSHZ1Q6ZSZ6 1077 aa9.12□□□□□ -0.95
ZEB1-210ENST00000557827 MYO1HQ8N1T3 1032 aa9.12□□□□□ -0.95
ZEB1-210ENST00000557827 LEO1Q8WVC0 666 aaPredicted RBP9.12□□□□□ -0.95
ZEB1-210ENST00000557827 KLHL3Q9UH77 587 aa9.12□□□□□ -0.95
ZEB1-210ENST00000557827 DACH1Q9UI36 760 aa9.12□□□□□ -0.95
ZEB1-210ENST00000557827 FAM83GA6ND36 823 aa9.11□□□□□ -0.95
ZEB1-210ENST00000557827 CHURC1-FNTBB4DL54 471 aa9.11□□□□□ -0.95
ZEB1-210ENST00000557827 AKAP10O43572 662 aa9.11□□□□□ -0.95
ZEB1-210ENST00000557827 NEK2P51955 445 aa9.11□□□□□ -0.95
ZEB1-210ENST00000557827 ZNF143P52747 638 aaPredicted RBP9.11□□□□□ -0.95
ZEB1-210ENST00000557827 MAP7Q14244 749 aa9.11□□□□□ -0.95
ZEB1-210ENST00000557827 TRIM22Q8IYM9 498 aa9.11□□□□□ -0.95
ZEB1-210ENST00000557827 CHPFQ8IZ52 775 aa9.11□□□□□ -0.95
ZEB1-210ENST00000557827 WDR66Q8TBY9 1149 aa9.11□□□□□ -0.95
ZEB1-210ENST00000557827 AARSD1Q9BTE6 412 aaKnown RBP9.11□□□□□ -0.95
ZEB1-210ENST00000557827 SMG9Q9H0W8 520 aaKnown RBP9.11□□□□□ -0.95
ZEB1-210ENST00000557827 ARNT2Q9HBZ2 717 aa9.11□□□□□ -0.95
ZEB1-210ENST00000557827 SLC5A4Q9NY91 659 aa9.11□□□□□ -0.95
ZEB1-210ENST00000557827 ZIM2Q9NZV7 527 aa9.11□□□□□ -0.95
ZEB1-210ENST00000557827 SLC35F4A4IF30 521 aa9.1□□□□□ -0.95
ZEB1-210ENST00000557827 ATF3P18847 181 aa9.1□□□□□ -0.95
ZEB1-210ENST00000557827 FGFR3P22607 806 aa9.1□□□□□ -0.95
ZEB1-210ENST00000557827 CDC27P30260 824 aa9.1□□□□□ -0.95
ZEB1-210ENST00000557827 CABP4P57796 275 aa9.1□□□□□ -0.95
ZEB1-210ENST00000557827 GSTM4Q03013 218 aa9.1□□□□□ -0.95
ZEB1-210ENST00000557827 STRN3Q13033 797 aa9.1□□□□□ -0.95
ZEB1-210ENST00000557827 MTMR1Q13613 665 aa9.1□□□□□ -0.95
ZEB1-210ENST00000557827 ELMSAN1Q6PJG2 1045 aa9.1□□□□□ -0.95
ZEB1-210ENST00000557827 CYFIP1Q7L576 1253 aa9.1□□□□□ -0.95
ZEB1-210ENST00000557827 NECAB2Q7Z6G3 386 aa9.1□□□□□ -0.95
ZEB1-210ENST00000557827 SYT9Q86SS6 491 aa9.1□□□□□ -0.95
ZEB1-210ENST00000557827 AHI1Q8N157 1196 aa9.1□□□□□ -0.95
ZEB1-210ENST00000557827 PPM1KQ8N3J5 372 aa9.1□□□□□ -0.95
ZEB1-210ENST00000557827 CCDC86Q9H6F5 360 aaKnown RBP9.1□□□□□ -0.95
ZEB1-210ENST00000557827 ANKRD34BA5PLL1 514 aa9.09□□□□□ -0.95
ZEB1-210ENST00000557827 ECEL1O95672 775 aa9.09□□□□□ -0.95
ZEB1-210ENST00000557827 RAG1P15918 1043 aa9.09□□□□□ -0.95
ZEB1-210ENST00000557827 EPHA1P21709 976 aa9.09□□□□□ -0.95
ZEB1-210ENST00000557827 PPP2R2AP63151 447 aa9.09□□□□□ -0.95
ZEB1-210ENST00000557827 CTBSQ01459 385 aa9.09□□□□□ -0.95
ZEB1-210ENST00000557827 ITKQ08881 620 aa9.09□□□□□ -0.95
ZEB1-210ENST00000557827 OS9Q13438 667 aaPredicted RBP9.09□□□□□ -0.95
ZEB1-210ENST00000557827 HDAC1Q13547 482 aaPredicted RBP9.09□□□□□ -0.95
ZEB1-210ENST00000557827 BBS9Q3SYG4 887 aa9.09□□□□□ -0.95
ZEB1-210ENST00000557827 RNF219Q5W0B1 726 aaPredicted RBP9.09□□□□□ -0.95
ZEB1-210ENST00000557827 LHFPL2Q6ZUX7 228 aa9.09□□□□□ -0.95
ZEB1-210ENST00000557827 TTC8Q8TAM2 541 aa9.09□□□□□ -0.95
ZEB1-210ENST00000557827 ELMO3Q96BJ8 720 aa9.09□□□□□ -0.95
ZEB1-210ENST00000557827 SLC39A13Q96H72 371 aa9.09□□□□□ -0.95
ZEB1-210ENST00000557827 SOX17Q9H6I2 414 aaPredicted RBP9.09□□□□□ -0.95
ZEB1-210ENST00000557827 KRT82Q9NSB4 513 aa9.09□□□□□ -0.95
ZEB1-210ENST00000557827 LRP2BPQ9P2M1 347 aa9.09□□□□□ -0.95
ZEB1-210ENST00000557827 SUSD2Q9UGT4 822 aa9.09□□□□□ -0.95
ZEB1-210ENST00000557827 COMMD10Q9Y6G5 202 aa9.09□□□□□ -0.95
ZEB1-210ENST00000557827 MAN1A2O60476 641 aa9.08□□□□□ -0.96
ZEB1-210ENST00000557827 DNAJC8O75937 253 aaPredicted RBP9.08□□□□□ -0.96
ZEB1-210ENST00000557827 PGRP06401 933 aa9.08□□□□□ -0.96
ZEB1-210ENST00000557827 NAT2P11245 290 aa9.08□□□□□ -0.96
ZEB1-210ENST00000557827 POLR2BP30876 1174 aaKnown RBP9.08□□□□□ -0.96
ZEB1-210ENST00000557827 SUMO1P63165 101 aaKnown RBP9.08□□□□□ -0.96
ZEB1-210ENST00000557827 PTSQ03393 145 aa9.08□□□□□ -0.96
ZEB1-210ENST00000557827 HLTFQ14527 1009 aaKnown RBP eCLIP9.08□□□□□ -0.96
ZEB1-210ENST00000557827 DHRS1Q96LJ7 313 aa9.08□□□□□ -0.96
ZEB1-210ENST00000557827 SMAD5Q99717 465 aaKnown RBP9.08□□□□□ -0.96
ZEB1-210ENST00000557827 CCDC8Q9H0W5 538 aaPredicted RBP9.08□□□□□ -0.96
ZEB1-210ENST00000557827 FAM86C1Q9NVL1 165 aa9.08□□□□□ -0.96
ZEB1-210ENST00000557827 ADAM30Q9UKF2 790 aa9.08□□□□□ -0.96
ZEB1-210ENST00000557827 SLC6A14Q9UN76 642 aa9.08□□□□□ -0.96
ZEB1-210ENST00000557827 PHF24Q9UPV7 400 aa9.08□□□□□ -0.96
ZEB1-210ENST00000557827 DCDC2CA8MYV0 355 aa9.07□□□□□ -0.96
ZEB1-210ENST00000557827 H3BRJ5 948 aa9.07□□□□□ -0.96
ZEB1-210ENST00000557827 SIN3BO75182 1162 aa9.07□□□□□ -0.96
ZEB1-210ENST00000557827 AVPP01185 164 aa9.07□□□□□ -0.96
ZEB1-210ENST00000557827 CYP11A1P05108 521 aa9.07□□□□□ -0.96
ZEB1-210ENST00000557827 MYL1P05976 194 aa9.07□□□□□ -0.96
ZEB1-210ENST00000557827 GRK4P32298 578 aa9.07□□□□□ -0.96
ZEB1-210ENST00000557827 HNRNPUQ00839 825 aaKnown RBP eCLIP9.07□□□□□ -0.96
ZEB1-210ENST00000557827 PCBP1Q15365 356 aaKnown RBP eCLIP9.07□□□□□ -0.96
ZEB1-210ENST00000557827 SYCP2LQ5T4T6 812 aa9.07□□□□□ -0.96
ZEB1-210ENST00000557827 GTPBP3Q969Y2 492 aaKnown RBP9.07□□□□□ -0.96
ZEB1-210ENST00000557827 ACSF2Q96CM8 615 aaPredicted RBP9.07□□□□□ -0.96
ZEB1-210ENST00000557827 EVI5LQ96CN4 794 aa9.07□□□□□ -0.96
ZEB1-210ENST00000557827 MTMR8Q96EF0 704 aa9.07□□□□□ -0.96
ZEB1-210ENST00000557827 CORO1BQ9BR76 489 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms