RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 BRD7Q9NPI1 651 aa7.55□□□□□ -1.2
FOXN3-218ENST00000557718 CCDC87Q9NVE4 849 aa7.55□□□□□ -1.2
FOXN3-218ENST00000557718 HYPKQ9NX55 129 aa7.55□□□□□ -1.2
FOXN3-218ENST00000557718 CCNL1Q9UK58 526 aaPredicted RBP7.55□□□□□ -1.2
FOXN3-218ENST00000557718 STARD13Q9Y3M8 1113 aa7.55□□□□□ -1.2
FOXN3-218ENST00000557718 PI4KAP2A4QPH2 592 aa7.54□□□□□ -1.2
FOXN3-218ENST00000557718 SPDYE3A6NKU9 549 aa7.54□□□□□ -1.2
FOXN3-218ENST00000557718 M0R082 166 aa7.54□□□□□ -1.2
FOXN3-218ENST00000557718 C21orf2O43822 256 aa7.54□□□□□ -1.2
FOXN3-218ENST00000557718 PPP1R12BO60237 982 aaPredicted RBP7.54□□□□□ -1.2
FOXN3-218ENST00000557718 STARD3NLO95772 234 aa7.54□□□□□ -1.2
FOXN3-218ENST00000557718 APBA3O96018 575 aa7.54□□□□□ -1.2
FOXN3-218ENST00000557718 CANXP27824 592 aaKnown RBP7.54□□□□□ -1.2
FOXN3-218ENST00000557718 TYRO3Q06418 890 aa7.54□□□□□ -1.2
FOXN3-218ENST00000557718 FKBP5Q13451 457 aaPredicted RBP7.54□□□□□ -1.2
FOXN3-218ENST00000557718 COL9A3Q14050 684 aaPredicted RBP7.54□□□□□ -1.2
FOXN3-218ENST00000557718 DOC2BQ14184 412 aa7.54□□□□□ -1.2
FOXN3-218ENST00000557718 INTS3Q68E01 1043 aaKnown RBP7.54□□□□□ -1.2
FOXN3-218ENST00000557718 COPS6Q7L5N1 327 aa7.54□□□□□ -1.2
FOXN3-218ENST00000557718 RAB44Q7Z6P3 723 aaPredicted RBP7.54□□□□□ -1.2
FOXN3-218ENST00000557718 DZIP1LQ8IYY4 767 aaKnown RBP7.54□□□□□ -1.2
FOXN3-218ENST00000557718 PI4KAP1Q8N8J0 262 aa7.54□□□□□ -1.2
FOXN3-218ENST00000557718 ZNF417Q8TAU3 575 aa7.54□□□□□ -1.2
FOXN3-218ENST00000557718 SUSD3Q96L08 255 aa7.54□□□□□ -1.2
FOXN3-218ENST00000557718 CAMKK2Q96RR4 588 aa7.54□□□□□ -1.2
FOXN3-218ENST00000557718 ZNF587Q96SQ5 575 aaPredicted RBP7.54□□□□□ -1.2
FOXN3-218ENST00000557718 COL15A1P39059 1388 aa7.54□□□□□ -1.2
FOXN3-218ENST00000557718 ALBP02768 609 aa7.53□□□□□ -1.2
FOXN3-218ENST00000557718 IL6STP40189 918 aaPredicted RBP7.53□□□□□ -1.2
FOXN3-218ENST00000557718 ADH7P40394 386 aa7.53□□□□□ -1.2
FOXN3-218ENST00000557718 GATA4P43694 442 aa7.53□□□□□ -1.2
FOXN3-218ENST00000557718 AIMP1Q12904 312 aaKnown RBP7.53□□□□□ -1.2
FOXN3-218ENST00000557718 MVPQ14764 893 aaKnown RBP7.53□□□□□ -1.2
FOXN3-218ENST00000557718 EZH2Q15910 746 aaKnown RBP7.53□□□□□ -1.2
FOXN3-218ENST00000557718 ZNF827Q17R98 1081 aa7.53□□□□□ -1.2
FOXN3-218ENST00000557718 PRRT3Q5FWE3 981 aa7.53□□□□□ -1.2
FOXN3-218ENST00000557718 KSR2Q6VAB6 950 aa7.53□□□□□ -1.2
FOXN3-218ENST00000557718 DEFB132Q7Z7B7 95 aa7.53□□□□□ -1.2
FOXN3-218ENST00000557718 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.53□□□□□ -1.2
FOXN3-218ENST00000557718 DNAAF4Q8WXU2 420 aa7.53□□□□□ -1.2
FOXN3-218ENST00000557718 API5Q9BZZ5 524 aaKnown RBP7.53□□□□□ -1.2
FOXN3-218ENST00000557718 PRDM6Q9NQX0 595 aa7.53□□□□□ -1.2
FOXN3-218ENST00000557718 KCNH4Q9UQ05 1017 aa7.53□□□□□ -1.2
FOXN3-218ENST00000557718 RBM19Q9Y4C8 960 aaKnown RBP7.53□□□□□ -1.2
FOXN3-218ENST00000557718 GTF3C3Q9Y5Q9 886 aa7.53□□□□□ -1.2
FOXN3-218ENST00000557718 COL4A1P02462 1669 aa7.53□□□□□ -1.2
FOXN3-218ENST00000557718 COL11A2P13942 1736 aaPredicted RBP7.52□□□□□ -1.2
FOXN3-218ENST00000557718 IPO8O15397 1037 aaKnown RBP7.52□□□□□ -1.21
FOXN3-218ENST00000557718 CAMTA2O94983 1202 aa7.52□□□□□ -1.21
FOXN3-218ENST00000557718 IGKV5-2P06315 115 aa7.52□□□□□ -1.21
FOXN3-218ENST00000557718 ITGB7P26010 798 aa7.52□□□□□ -1.21
FOXN3-218ENST00000557718 HLFQ16534 295 aa7.52□□□□□ -1.21
FOXN3-218ENST00000557718 BEND3Q5T5X7 828 aa7.52□□□□□ -1.21
FOXN3-218ENST00000557718 C8orf86Q6ZUL3 223 aa7.52□□□□□ -1.21
FOXN3-218ENST00000557718 ILDR2Q71H61 639 aa7.52□□□□□ -1.21
FOXN3-218ENST00000557718 ALDH16A1Q8IZ83 802 aa7.52□□□□□ -1.21
FOXN3-218ENST00000557718 MICALL1Q8N3F8 863 aa7.52□□□□□ -1.21
FOXN3-218ENST00000557718 MAP3K2Q9Y2U5 619 aa7.52□□□□□ -1.21
FOXN3-218ENST00000557718 KIF13BQ9NQT8 1826 aa7.52□□□□□ -1.21
FOXN3-218ENST00000557718 KIAA1551Q9HCM1 1747 aa7.52□□□□□ -1.21
FOXN3-218ENST00000557718 MAP3K15Q6ZN16 1313 aa7.52□□□□□ -1.21
FOXN3-218ENST00000557718 IBTKQ9P2D0 1353 aaPredicted RBP7.51□□□□□ -1.21
FOXN3-218ENST00000557718 RPS6KA4O75676 772 aa7.51□□□□□ -1.21
FOXN3-218ENST00000557718 RASA1P20936 1047 aa7.51□□□□□ -1.21
FOXN3-218ENST00000557718 CWF19L2Q2TBE0 894 aaKnown RBP7.51□□□□□ -1.21
FOXN3-218ENST00000557718 Q8N3U1 123 aa7.51□□□□□ -1.21
FOXN3-218ENST00000557718 STAG2Q8N3U4 1231 aa7.51□□□□□ -1.21
FOXN3-218ENST00000557718 PLBD2Q8NHP8 589 aa7.51□□□□□ -1.21
FOXN3-218ENST00000557718 MEIS3Q99687 375 aa7.51□□□□□ -1.21
FOXN3-218ENST00000557718 METTL22Q9BUU2 404 aaPredicted RBP7.51□□□□□ -1.21
FOXN3-218ENST00000557718 C2orf49Q9BVC5 232 aaPredicted RBP7.51□□□□□ -1.21
FOXN3-218ENST00000557718 CHMP4AQ9BY43 222 aa7.51□□□□□ -1.21
FOXN3-218ENST00000557718 SEMA6BQ9H3T3 888 aa7.51□□□□□ -1.21
FOXN3-218ENST00000557718 TFIP11Q9UBB9 837 aaKnown RBP7.51□□□□□ -1.21
FOXN3-218ENST00000557718 DLEC1Q9Y238 1755 aa7.51□□□□□ -1.21
FOXN3-218ENST00000557718 BRCA1P38398 1863 aaKnown RBP7.5□□□□□ -1.21
FOXN3-218ENST00000557718 FAM229AH3BQW9 127 aa7.5□□□□□ -1.21
FOXN3-218ENST00000557718 SLC4A10Q6U841 1118 aa7.5□□□□□ -1.21
FOXN3-218ENST00000557718 C20orf204Q6ZNR8 217 aa7.5□□□□□ -1.21
FOXN3-218ENST00000557718 ITPRIPQ8IWB1 547 aa7.5□□□□□ -1.21
FOXN3-218ENST00000557718 FTSJ3Q8IY81 847 aaKnown RBP7.5□□□□□ -1.21
FOXN3-218ENST00000557718 SCG3Q8WXD2 468 aaKnown RBP7.5□□□□□ -1.21
FOXN3-218ENST00000557718 GLMNQ92990 594 aa7.5□□□□□ -1.21
FOXN3-218ENST00000557718 MYD88Q99836 296 aa7.5□□□□□ -1.21
FOXN3-218ENST00000557718 ISCA1Q9BUE6 129 aa7.5□□□□□ -1.21
FOXN3-218ENST00000557718 USP44Q9H0E7 712 aa7.5□□□□□ -1.21
FOXN3-218ENST00000557718 ZBTB40Q9NUA8 1239 aa7.5□□□□□ -1.21
FOXN3-218ENST00000557718 SRP68Q9UHB9 627 aaKnown RBP7.5□□□□□ -1.21
FOXN3-218ENST00000557718 MAFBQ9Y5Q3 323 aaPredicted RBP7.5□□□□□ -1.21
FOXN3-218ENST00000557718 UBN2Q6ZU65 1347 aa7.5□□□□□ -1.21
FOXN3-218ENST00000557718 DDX58O95786 925 aaKnown RBP7.49□□□□□ -1.21
FOXN3-218ENST00000557718 NEFLP07196 543 aa7.49□□□□□ -1.21
FOXN3-218ENST00000557718 NID1P14543 1247 aa7.49□□□□□ -1.21
FOXN3-218ENST00000557718 CCT4P50991 539 aaKnown RBP7.49□□□□□ -1.21
FOXN3-218ENST00000557718 CASP7P55210 303 aa7.49□□□□□ -1.21
FOXN3-218ENST00000557718 SEC13P55735 322 aa7.49□□□□□ -1.21
FOXN3-218ENST00000557718 TRIM28Q13263 835 aaKnown RBP7.49□□□□□ -1.21
FOXN3-218ENST00000557718 BTLAQ7Z6A9 289 aa7.49□□□□□ -1.21
FOXN3-218ENST00000557718 LINS1Q8NG48 757 aa7.49□□□□□ -1.21
FOXN3-218ENST00000557718 BHMTQ93088 406 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms