RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.91□□□□□ -0.34
PSMC6-215ENST00000557517 TGFBRAP1Q8WUH2 860 aa12.91□□□□□ -0.34
PSMC6-215ENST00000557517 TBC1D2Q9BYX2 928 aa12.91□□□□□ -0.34
PSMC6-215ENST00000557517 ARHGAP39Q9C0H5 1083 aa12.91□□□□□ -0.34
PSMC6-215ENST00000557517 IL1RAPL2Q9NP60 686 aa12.91□□□□□ -0.34
PSMC6-215ENST00000557517 CPA4Q9UI42 421 aa12.91□□□□□ -0.34
PSMC6-215ENST00000557517 FAM196BA6NMK8 535 aa12.9□□□□□ -0.34
PSMC6-215ENST00000557517 IDH1O75874 414 aaKnown RBP12.9□□□□□ -0.34
PSMC6-215ENST00000557517 CYP2C8P10632 490 aa12.9□□□□□ -0.34
PSMC6-215ENST00000557517 CYP7A1P22680 504 aa12.9□□□□□ -0.34
PSMC6-215ENST00000557517 MAP3K12Q12852 859 aa12.9□□□□□ -0.34
PSMC6-215ENST00000557517 SPP2Q13103 211 aa12.9□□□□□ -0.34
PSMC6-215ENST00000557517 SH3D19Q5HYK7 790 aa12.9□□□□□ -0.34
PSMC6-215ENST00000557517 NBPF11Q86T75 865 aa12.9□□□□□ -0.34
PSMC6-215ENST00000557517 ZNF280CQ8ND82 737 aa12.9□□□□□ -0.34
PSMC6-215ENST00000557517 ZNF333Q96JL9 665 aa12.9□□□□□ -0.34
PSMC6-215ENST00000557517 PARK7Q99497 189 aaKnown RBP12.9□□□□□ -0.34
PSMC6-215ENST00000557517 PTCH2Q9Y6C5 1203 aa12.9□□□□□ -0.34
PSMC6-215ENST00000557517 FLT1P17948 1338 aa12.89□□□□□ -0.35
PSMC6-215ENST00000557517 RANBP2P49792 3224 aaKnown RBP12.89□□□□□ -0.35
PSMC6-215ENST00000557517 TRIM75PA6NK02 468 aa12.89□□□□□ -0.35
PSMC6-215ENST00000557517 USP17L5A8MUK1 530 aa12.89□□□□□ -0.35
PSMC6-215ENST00000557517 PSMC4P43686 418 aa12.89□□□□□ -0.35
PSMC6-215ENST00000557517 DYNLL1P63167 89 aaKnown RBP12.89□□□□□ -0.35
PSMC6-215ENST00000557517 JAG1P78504 1218 aa12.89□□□□□ -0.35
PSMC6-215ENST00000557517 TTF1Q15361 905 aaPredicted RBP12.89□□□□□ -0.35
PSMC6-215ENST00000557517 C20orf194Q5TEA3 1177 aa12.89□□□□□ -0.35
PSMC6-215ENST00000557517 MAPKAPK5Q8IW41 473 aa12.89□□□□□ -0.35
PSMC6-215ENST00000557517 MAGEB6Q8N7X4 407 aa12.89□□□□□ -0.35
PSMC6-215ENST00000557517 TRIM47Q96LD4 638 aa12.89□□□□□ -0.35
PSMC6-215ENST00000557517 WDR18Q9BV38 432 aa12.89□□□□□ -0.35
PSMC6-215ENST00000557517 GINM1Q9NU53 330 aa12.89□□□□□ -0.35
PSMC6-215ENST00000557517 PALD1Q9ULE6 856 aa12.89□□□□□ -0.35
PSMC6-215ENST00000557517 AGTPBP1Q9UPW5 1226 aa12.89□□□□□ -0.35
PSMC6-215ENST00000557517 NDUFB9Q9Y6M9 179 aa12.89□□□□□ -0.35
PSMC6-215ENST00000557517 HOXD10P28358 340 aa12.88□□□□□ -0.35
PSMC6-215ENST00000557517 CCDC84Q86UT8 332 aaPredicted RBP12.88□□□□□ -0.35
PSMC6-215ENST00000557517 PROCA1Q8NCQ7 364 aaPredicted RBP12.88□□□□□ -0.35
PSMC6-215ENST00000557517 RIOK1Q9BRS2 568 aaKnown RBP12.88□□□□□ -0.35
PSMC6-215ENST00000557517 DNAJC18Q9H819 358 aa12.88□□□□□ -0.35
PSMC6-215ENST00000557517 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.88□□□□□ -0.35
PSMC6-215ENST00000557517 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.88□□□□□ -0.35
PSMC6-215ENST00000557517 SRRDQ9UH36 339 aa12.88□□□□□ -0.35
PSMC6-215ENST00000557517 OTOFQ9HC10 1997 aa12.88□□□□□ -0.35
PSMC6-215ENST00000557517 ASNSP08243 561 aa12.87□□□□□ -0.35
PSMC6-215ENST00000557517 IFIT2P09913 472 aaKnown RBP12.87□□□□□ -0.35
PSMC6-215ENST00000557517 OSBPP22059 807 aa12.87□□□□□ -0.35
PSMC6-215ENST00000557517 SLC9C1Q4G0N8 1177 aa12.87□□□□□ -0.35
PSMC6-215ENST00000557517 TATDN1Q6P1N9 297 aa12.87□□□□□ -0.35
PSMC6-215ENST00000557517 GADL1Q6ZQY3 521 aa12.87□□□□□ -0.35
PSMC6-215ENST00000557517 MIGA1Q8NAN2 632 aa12.87□□□□□ -0.35
PSMC6-215ENST00000557517 ST18O60284 1047 aa12.86□□□□□ -0.35
PSMC6-215ENST00000557517 FMNL1O95466 1100 aaPredicted RBP12.86□□□□□ -0.35
PSMC6-215ENST00000557517 ATP5JP18859 108 aa12.86□□□□□ -0.35
PSMC6-215ENST00000557517 TREML2Q5T2D2 321 aa12.86□□□□□ -0.35
PSMC6-215ENST00000557517 SLC9C2Q5TAH2 1124 aa12.86□□□□□ -0.35
PSMC6-215ENST00000557517 EHD4Q9H223 541 aa12.86□□□□□ -0.35
PSMC6-215ENST00000557517 AS3MTQ9HBK9 375 aa12.86□□□□□ -0.35
PSMC6-215ENST00000557517 TCRBV5S4A2TA0A5A2 114 aa12.85□□□□□ -0.35
PSMC6-215ENST00000557517 C19orf81C9J6K1 198 aa12.85□□□□□ -0.35
PSMC6-215ENST00000557517 HLA-DOAP06340 250 aa12.85□□□□□ -0.35
PSMC6-215ENST00000557517 HOXA7P31268 230 aaPredicted RBP12.85□□□□□ -0.35
PSMC6-215ENST00000557517 FCGRTP55899 365 aa12.85□□□□□ -0.35
PSMC6-215ENST00000557517 BACE1P56817 501 aa12.85□□□□□ -0.35
PSMC6-215ENST00000557517 SLC4A8Q2Y0W8 1093 aa12.85□□□□□ -0.35
PSMC6-215ENST00000557517 TTC6Q86TZ1 520 aa12.85□□□□□ -0.35
PSMC6-215ENST00000557517 CRACR2BQ8N4Y2 399 aaPredicted RBP12.85□□□□□ -0.35
PSMC6-215ENST00000557517 H0YGN5 161 aa12.84□□□□□ -0.35
PSMC6-215ENST00000557517 APBB1O00213 710 aa12.84□□□□□ -0.35
PSMC6-215ENST00000557517 GOLIM4O00461 696 aa12.84□□□□□ -0.35
PSMC6-215ENST00000557517 CHRM1P11229 460 aaPredicted RBP12.84□□□□□ -0.35
PSMC6-215ENST00000557517 PDE6AP16499 860 aa12.84□□□□□ -0.35
PSMC6-215ENST00000557517 USP5P45974 858 aa12.84□□□□□ -0.35
PSMC6-215ENST00000557517 GCLCP48506 637 aaPredicted RBP12.84□□□□□ -0.35
PSMC6-215ENST00000557517 HMGCS2P54868 508 aa12.84□□□□□ -0.35
PSMC6-215ENST00000557517 PABPC4Q13310 644 aaKnown RBP eCLIP12.84□□□□□ -0.35
PSMC6-215ENST00000557517 SMCR8Q8TEV9 937 aaPredicted RBP12.84□□□□□ -0.35
PSMC6-215ENST00000557517 SH3TC2Q8TF17 1288 aa12.84□□□□□ -0.35
PSMC6-215ENST00000557517 HAUS7Q99871 368 aa12.84□□□□□ -0.35
PSMC6-215ENST00000557517 DCTPP1Q9H773 170 aa12.84□□□□□ -0.35
PSMC6-215ENST00000557517 SAP30BPQ9UHR5 308 aaKnown RBP12.84□□□□□ -0.35
PSMC6-215ENST00000557517 SERPINB13Q9UIV8 391 aa12.84□□□□□ -0.35
PSMC6-215ENST00000557517 PNMA3Q9UL41 463 aa12.84□□□□□ -0.35
PSMC6-215ENST00000557517 MAGEB6P1A0A0J9YX57 407 aa12.83□□□□□ -0.36
PSMC6-215ENST00000557517 USP17L10C9JJH3 530 aa12.83□□□□□ -0.36
PSMC6-215ENST00000557517 MYCP01106 439 aaPredicted RBP12.83□□□□□ -0.36
PSMC6-215ENST00000557517 GRK4P32298 578 aa12.83□□□□□ -0.36
PSMC6-215ENST00000557517 PLCD1P51178 756 aa12.83□□□□□ -0.36
PSMC6-215ENST00000557517 PRKCZQ05513 592 aa12.83□□□□□ -0.36
PSMC6-215ENST00000557517 IRF5Q13568 498 aa12.83□□□□□ -0.36
PSMC6-215ENST00000557517 FAM110CQ1W6H9 321 aa12.83□□□□□ -0.36
PSMC6-215ENST00000557517 LRRCC1Q9C099 1032 aa12.83□□□□□ -0.36
PSMC6-215ENST00000557517 ASCC2Q9H1I8 757 aaPredicted RBP12.83□□□□□ -0.36
PSMC6-215ENST00000557517 BOLA2Q9H3K6 86 aa12.83□□□□□ -0.36
PSMC6-215ENST00000557517 ZBTB21Q9ULJ3 1066 aa12.83□□□□□ -0.36
PSMC6-215ENST00000557517 ZNF532Q9HCE3 1301 aa12.83□□□□□ -0.36
PSMC6-215ENST00000557517 MYH2Q9UKX2 1941 aa12.82□□□□□ -0.36
PSMC6-215ENST00000557517 SNPHO15079 494 aa12.82□□□□□ -0.36
PSMC6-215ENST00000557517 FLT3LGP49771 235 aa12.82□□□□□ -0.36
PSMC6-215ENST00000557517 GABPAQ06546 454 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms