RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 KCNH4Q9UQ05 1017 aa7.37□□□□□ -1.23
VPS33B-207ENST00000557470 ADGRG1Q9Y653 693 aa7.37□□□□□ -1.23
VPS33B-207ENST00000557470 DLL1O00548 723 aa7.36□□□□□ -1.23
VPS33B-207ENST00000557470 SOX1O00570 391 aaPredicted RBP7.36□□□□□ -1.23
VPS33B-207ENST00000557470 ZBTB7BO15156 539 aaPredicted RBP7.36□□□□□ -1.23
VPS33B-207ENST00000557470 FRAT2O75474 233 aaPredicted RBP7.36□□□□□ -1.23
VPS33B-207ENST00000557470 ALDH1L1O75891 902 aa7.36□□□□□ -1.23
VPS33B-207ENST00000557470 FARP2O94887 1054 aaPredicted RBP7.36□□□□□ -1.23
VPS33B-207ENST00000557470 HOXD10P28358 340 aa7.36□□□□□ -1.23
VPS33B-207ENST00000557470 EXOSC9Q06265 439 aaKnown RBP7.36□□□□□ -1.23
VPS33B-207ENST00000557470 LRRC24Q50LG9 513 aa7.36□□□□□ -1.23
VPS33B-207ENST00000557470 VGLL2Q8N8G2 317 aa7.36□□□□□ -1.23
VPS33B-207ENST00000557470 SLC17A8Q8NDX2 589 aa7.36□□□□□ -1.23
VPS33B-207ENST00000557470 U2AF1L4Q8WU68 220 aaKnown RBP7.36□□□□□ -1.23
VPS33B-207ENST00000557470 HOOK2Q96ED9 719 aa7.36□□□□□ -1.23
VPS33B-207ENST00000557470 MRIQ9BWK5 157 aa7.36□□□□□ -1.23
VPS33B-207ENST00000557470 ZNF341Q9BYN7 854 aa7.36□□□□□ -1.23
VPS33B-207ENST00000557470 UNC93B1Q9H1C4 597 aa7.36□□□□□ -1.23
VPS33B-207ENST00000557470 BIN2Q9UBW5 565 aaPredicted RBP7.36□□□□□ -1.23
VPS33B-207ENST00000557470 CACNA1FO60840 1977 aa7.36□□□□□ -1.23
VPS33B-207ENST00000557470 MAST3O60307 1309 aa7.35□□□□□ -1.23
VPS33B-207ENST00000557470 NBPF7P0C2Y1 421 aaPredicted RBP7.35□□□□□ -1.23
VPS33B-207ENST00000557470 CYP2C8P10632 490 aa7.35□□□□□ -1.23
VPS33B-207ENST00000557470 BCRP11274 1271 aa7.35□□□□□ -1.23
VPS33B-207ENST00000557470 UBXN2AP68543 259 aa7.35□□□□□ -1.23
VPS33B-207ENST00000557470 CAVIN4Q5BKX8 364 aa7.35□□□□□ -1.23
VPS33B-207ENST00000557470 METTL24Q5JXM2 366 aa7.35□□□□□ -1.23
VPS33B-207ENST00000557470 NOL9Q5SY16 702 aaKnown RBP7.35□□□□□ -1.23
VPS33B-207ENST00000557470 GPAT2Q6NUI2 795 aa7.35□□□□□ -1.23
VPS33B-207ENST00000557470 SLC4A10Q6U841 1118 aa7.35□□□□□ -1.23
VPS33B-207ENST00000557470 HHIPL2Q6UWX4 724 aa7.35□□□□□ -1.23
VPS33B-207ENST00000557470 ANKRD44Q8N8A2 993 aa7.35□□□□□ -1.23
VPS33B-207ENST00000557470 PARK7Q99497 189 aaKnown RBP7.35□□□□□ -1.23
VPS33B-207ENST00000557470 MTRQ99707 1265 aa7.35□□□□□ -1.23
VPS33B-207ENST00000557470 SRCIN1Q9C0H9 1055 aa7.35□□□□□ -1.23
VPS33B-207ENST00000557470 BICC1Q9H694 974 aaKnown RBP7.35□□□□□ -1.23
VPS33B-207ENST00000557470 ZNF112Q9UJU3 913 aa7.35□□□□□ -1.23
VPS33B-207ENST00000557470 GABRQQ9UN88 632 aa7.35□□□□□ -1.23
VPS33B-207ENST00000557470 DAGLAQ9Y4D2 1042 aa7.35□□□□□ -1.23
VPS33B-207ENST00000557470 NR2E3Q9Y5X4 410 aa7.35□□□□□ -1.23
VPS33B-207ENST00000557470 PDE8BO95263 885 aa7.34□□□□□ -1.23
VPS33B-207ENST00000557470 ELNP15502 786 aa7.34□□□□□ -1.23
VPS33B-207ENST00000557470 FECHP22830 423 aa7.34□□□□□ -1.23
VPS33B-207ENST00000557470 FCGRTP55899 365 aa7.34□□□□□ -1.23
VPS33B-207ENST00000557470 TCP10Q12799 353 aa7.34□□□□□ -1.23
VPS33B-207ENST00000557470 NFIAQ12857 509 aa7.34□□□□□ -1.23
VPS33B-207ENST00000557470 DIXDC1Q155Q3 683 aa7.34□□□□□ -1.23
VPS33B-207ENST00000557470 RABL6Q3YEC7 729 aaPredicted RBP7.34□□□□□ -1.23
VPS33B-207ENST00000557470 RETREG2Q8NC44 543 aa7.34□□□□□ -1.23
VPS33B-207ENST00000557470 KLHDC4Q8TBB5 520 aa7.34□□□□□ -1.23
VPS33B-207ENST00000557470 FAM151AQ8WW52 585 aa7.34□□□□□ -1.23
VPS33B-207ENST00000557470 ZNF516Q92618 1163 aa7.34□□□□□ -1.23
VPS33B-207ENST00000557470 SUGT1Q9Y2Z0 365 aa7.34□□□□□ -1.23
VPS33B-207ENST00000557470 SALL2Q9Y467 1007 aaPredicted RBP7.34□□□□□ -1.23
VPS33B-207ENST00000557470 UTYO14607 1347 aa7.33□□□□□ -1.24
VPS33B-207ENST00000557470 KIF16BQ96L93 1317 aa7.33□□□□□ -1.24
VPS33B-207ENST00000557470 A0A1W2PPC1 479 aa7.33□□□□□ -1.24
VPS33B-207ENST00000557470 RCCD1A6NED2 376 aa7.33□□□□□ -1.24
VPS33B-207ENST00000557470 ADCY3O60266 1144 aa7.33□□□□□ -1.24
VPS33B-207ENST00000557470 SGPL1O95470 568 aa7.33□□□□□ -1.24
VPS33B-207ENST00000557470 INHAP05111 366 aa7.33□□□□□ -1.24
VPS33B-207ENST00000557470 IFIT1P09914 478 aaKnown RBP7.33□□□□□ -1.24
VPS33B-207ENST00000557470 FGFR2P21802 821 aa7.33□□□□□ -1.24
VPS33B-207ENST00000557470 FLT3LGP49771 235 aa7.33□□□□□ -1.24
VPS33B-207ENST00000557470 PUM3Q15397 648 aaKnown RBP7.33□□□□□ -1.24
VPS33B-207ENST00000557470 CDC42EP5Q6NZY7 148 aa7.33□□□□□ -1.24
VPS33B-207ENST00000557470 WDR63Q8IWG1 891 aa7.33□□□□□ -1.24
VPS33B-207ENST00000557470 ZFPM1Q8IX07 1006 aa7.33□□□□□ -1.24
VPS33B-207ENST00000557470 SLF2Q8IX21 1173 aa7.33□□□□□ -1.24
VPS33B-207ENST00000557470 DEFB118Q96PH6 123 aa7.33□□□□□ -1.24
VPS33B-207ENST00000557470 STAP2Q9UGK3 403 aa7.33□□□□□ -1.24
VPS33B-207ENST00000557470 ATRNL1Q5VV63 1379 aa7.33□□□□□ -1.24
VPS33B-207ENST00000557470 A0A0G2JLL6 359 aaPredicted RBP7.32□□□□□ -1.24
VPS33B-207ENST00000557470 PHF20L1A8MW92 1017 aa7.32□□□□□ -1.24
VPS33B-207ENST00000557470 CXCL11O14625 94 aa7.32□□□□□ -1.24
VPS33B-207ENST00000557470 GPR37O15354 613 aa7.32□□□□□ -1.24
VPS33B-207ENST00000557470 RGS20O76081 388 aa7.32□□□□□ -1.24
VPS33B-207ENST00000557470 TFRCP02786 760 aaKnown RBP7.32□□□□□ -1.24
VPS33B-207ENST00000557470 PTPRAP18433 802 aa7.32□□□□□ -1.24
VPS33B-207ENST00000557470 DNAJB2P25686 324 aa7.32□□□□□ -1.24
VPS33B-207ENST00000557470 PRDX5P30044 214 aa7.32□□□□□ -1.24
VPS33B-207ENST00000557470 PRRT2Q7Z6L0 340 aaPredicted RBP7.32□□□□□ -1.24
VPS33B-207ENST00000557470 WDR66Q8TBY9 1149 aa7.32□□□□□ -1.24
VPS33B-207ENST00000557470 PXYLP1Q8TE99 480 aa7.32□□□□□ -1.24
VPS33B-207ENST00000557470 DIS3LQ8TF46 1054 aaKnown RBP7.32□□□□□ -1.24
VPS33B-207ENST00000557470 TMEM134Q9H6X4 195 aa7.32□□□□□ -1.24
VPS33B-207ENST00000557470 GOPCQ9HD26 462 aa7.32□□□□□ -1.24
VPS33B-207ENST00000557470 PAK6Q9NQU5 681 aaPredicted RBP7.32□□□□□ -1.24
VPS33B-207ENST00000557470 ZHX2Q9Y6X8 837 aa7.32□□□□□ -1.24
VPS33B-207ENST00000557470 MGAMO43451 1857 aa7.32□□□□□ -1.24
VPS33B-207ENST00000557470 TNPO2O14787 897 aaKnown RBP7.31□□□□□ -1.24
VPS33B-207ENST00000557470 SLURP2P0DP57 97 aa7.31□□□□□ -1.24
VPS33B-207ENST00000557470 IRF5Q13568 498 aa7.31□□□□□ -1.24
VPS33B-207ENST00000557470 GADL1Q6ZQY3 521 aa7.31□□□□□ -1.24
VPS33B-207ENST00000557470 FASTKD5Q7L8L6 764 aaKnown RBP7.31□□□□□ -1.24
VPS33B-207ENST00000557470 SCYL3Q8IZE3 742 aa7.31□□□□□ -1.24
VPS33B-207ENST00000557470 PAWRQ96IZ0 340 aaKnown RBP7.31□□□□□ -1.24
VPS33B-207ENST00000557470 PICK1Q9NRD5 415 aa7.31□□□□□ -1.24
VPS33B-207ENST00000557470 USP40Q9NVE5 1235 aa7.31□□□□□ -1.24
VPS33B-207ENST00000557470 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms