RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 GYG1P46976 350 aa12.23□□□□□ -0.45
HNRNPC-228ENST00000557033 ZNF157P51786 506 aaPredicted RBP12.23□□□□□ -0.45
HNRNPC-228ENST00000557033 LBX1P52954 281 aa12.23□□□□□ -0.45
HNRNPC-228ENST00000557033 TAGLNQ01995 201 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-228ENST00000557033 DLGAP5Q15398 846 aa12.23□□□□□ -0.45
HNRNPC-228ENST00000557033 LRRC24Q50LG9 513 aa12.23□□□□□ -0.45
HNRNPC-228ENST00000557033 CAVIN4Q5BKX8 364 aa12.23□□□□□ -0.45
HNRNPC-228ENST00000557033 METTL24Q5JXM2 366 aa12.23□□□□□ -0.45
HNRNPC-228ENST00000557033 POTEEQ6S8J3 1075 aa12.23□□□□□ -0.45
HNRNPC-228ENST00000557033 APOBEC3FQ8IUX4 373 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-228ENST00000557033 CERS5Q8N5B7 392 aa12.23□□□□□ -0.45
HNRNPC-228ENST00000557033 THAP11Q96EK4 314 aa12.23□□□□□ -0.45
HNRNPC-228ENST00000557033 PRIMPOLQ96LW4 560 aa12.23□□□□□ -0.45
HNRNPC-228ENST00000557033 VPS9D1Q9Y2B5 631 aa12.23□□□□□ -0.45
HNRNPC-228ENST00000557033 FAM155AB1AL88 458 aaPredicted RBP12.22□□□□□ -0.45
HNRNPC-228ENST00000557033 MYO1BO43795 1136 aa12.22□□□□□ -0.45
HNRNPC-228ENST00000557033 NF2P35240 595 aa12.22□□□□□ -0.45
HNRNPC-228ENST00000557033 RFX5P48382 616 aaPredicted RBP12.22□□□□□ -0.45
HNRNPC-228ENST00000557033 SEC13P55735 322 aa12.22□□□□□ -0.45
HNRNPC-228ENST00000557033 INTS3Q68E01 1043 aaKnown RBP12.22□□□□□ -0.45
HNRNPC-228ENST00000557033 VPS37DQ86XT2 251 aa12.22□□□□□ -0.45
HNRNPC-228ENST00000557033 VGLL2Q8N8G2 317 aa12.22□□□□□ -0.45
HNRNPC-228ENST00000557033 ZFRQ96KR1 1074 aaKnown RBP12.22□□□□□ -0.45
HNRNPC-228ENST00000557033 EVA1BQ9NVM1 165 aa12.22□□□□□ -0.45
HNRNPC-228ENST00000557033 KIAA1024Q9UPX6 916 aa12.22□□□□□ -0.45
HNRNPC-228ENST00000557033 EYA2O00167 538 aa12.21□□□□□ -0.45
HNRNPC-228ENST00000557033 FMNL1O95466 1100 aaPredicted RBP12.21□□□□□ -0.45
HNRNPC-228ENST00000557033 PTPN12Q05209 780 aaKnown RBP12.21□□□□□ -0.45
HNRNPC-228ENST00000557033 ECM1Q16610 540 aa12.21□□□□□ -0.45
HNRNPC-228ENST00000557033 SCUBE3Q8IX30 993 aa12.21□□□□□ -0.45
HNRNPC-228ENST00000557033 KLHDC4Q8TBB5 520 aa12.21□□□□□ -0.45
HNRNPC-228ENST00000557033 ASB16Q96NS5 453 aa12.21□□□□□ -0.45
HNRNPC-228ENST00000557033 PRR14Q9BWN1 585 aa12.21□□□□□ -0.45
HNRNPC-228ENST00000557033 ANO2Q9NQ90 1003 aa12.21□□□□□ -0.45
HNRNPC-228ENST00000557033 F8W031 263 aaPredicted RBP12.2□□□□□ -0.46
HNRNPC-228ENST00000557033 H3BRB1 525 aa12.2□□□□□ -0.46
HNRNPC-228ENST00000557033 SNPHO15079 494 aa12.2□□□□□ -0.46
HNRNPC-228ENST00000557033 CIAO1O76071 339 aa12.2□□□□□ -0.46
HNRNPC-228ENST00000557033 GNAI3P08754 354 aa12.2□□□□□ -0.46
HNRNPC-228ENST00000557033 IFIT1P09914 478 aaKnown RBP12.2□□□□□ -0.46
HNRNPC-228ENST00000557033 FGFR2P21802 821 aa12.2□□□□□ -0.46
HNRNPC-228ENST00000557033 ZNF211Q13398 564 aaPredicted RBP12.2□□□□□ -0.46
HNRNPC-228ENST00000557033 PUM3Q15397 648 aaKnown RBP12.2□□□□□ -0.46
HNRNPC-228ENST00000557033 CFAP100Q494V2 611 aa12.2□□□□□ -0.46
HNRNPC-228ENST00000557033 MFSD14BQ5SR56 506 aa12.2□□□□□ -0.46
HNRNPC-228ENST00000557033 PRAMEF18Q5VWM3 479 aa12.2□□□□□ -0.46
HNRNPC-228ENST00000557033 ADAM32Q8TC27 787 aa12.2□□□□□ -0.46
HNRNPC-228ENST00000557033 TBC1D22AQ8WUA7 517 aa12.2□□□□□ -0.46
HNRNPC-228ENST00000557033 PRMT6Q96LA8 375 aaPredicted RBP12.2□□□□□ -0.46
HNRNPC-228ENST00000557033 DEFB129Q9H1M3 183 aa12.2□□□□□ -0.46
HNRNPC-228ENST00000557033 TUT1Q9H6E5 874 aaKnown RBP12.2□□□□□ -0.46
HNRNPC-228ENST00000557033 SCAF8Q9UPN6 1271 aaKnown RBP12.2□□□□□ -0.46
HNRNPC-228ENST00000557033 PPP2R3BQ9Y5P8 575 aa12.2□□□□□ -0.46
HNRNPC-228ENST00000557033 COL1A1P02452 1464 aaPredicted RBP12.2□□□□□ -0.46
HNRNPC-228ENST00000557033 BHMG1C9JSJ3 638 aaPredicted RBP12.19□□□□□ -0.46
HNRNPC-228ENST00000557033 FRAT2O75474 233 aaPredicted RBP12.19□□□□□ -0.46
HNRNPC-228ENST00000557033 HNRNPUQ00839 825 aaKnown RBP eCLIP12.19□□□□□ -0.46
HNRNPC-228ENST00000557033 KIF23Q02241 960 aaPredicted RBP12.19□□□□□ -0.46
HNRNPC-228ENST00000557033 GLYCTKQ8IVS8 523 aa12.19□□□□□ -0.46
HNRNPC-228ENST00000557033 SREK1Q8WXA9 508 aaKnown RBP12.19□□□□□ -0.46
HNRNPC-228ENST00000557033 LPIN2Q92539 896 aa12.19□□□□□ -0.46
HNRNPC-228ENST00000557033 MRIQ9BWK5 157 aa12.19□□□□□ -0.46
HNRNPC-228ENST00000557033 TTF2Q9UNY4 1162 aaKnown RBP12.19□□□□□ -0.46
HNRNPC-228ENST00000557033 JAG2Q9Y219 1238 aa12.19□□□□□ -0.46
HNRNPC-228ENST00000557033 PAPPA2Q9BXP8 1791 aa12.19□□□□□ -0.46
HNRNPC-228ENST00000557033 UBE2Q2LH0YL09 131 aa12.18□□□□□ -0.46
HNRNPC-228ENST00000557033 MAPK1P28482 360 aa12.18□□□□□ -0.46
HNRNPC-228ENST00000557033 RBM5P52756 815 aaKnown RBP eCLIP12.18□□□□□ -0.465e-14■■□□□ 12.8
HNRNPC-228ENST00000557033 HDLBPQ00341 1268 aaKnown RBP12.18□□□□□ -0.46
HNRNPC-228ENST00000557033 SUPT20HL1Q3ZLR7 823 aa12.18□□□□□ -0.46
HNRNPC-228ENST00000557033 ATF7IPQ6VMQ6 1270 aa12.18□□□□□ -0.46
HNRNPC-228ENST00000557033 ATG9AQ7Z3C6 839 aa12.18□□□□□ -0.46
HNRNPC-228ENST00000557033 ARMC9Q7Z3E5 817 aa12.18□□□□□ -0.46
HNRNPC-228ENST00000557033 ZIC5Q96T25 663 aa12.18□□□□□ -0.46
HNRNPC-228ENST00000557033 NBPF3Q9H094 633 aa12.18□□□□□ -0.46
HNRNPC-228ENST00000557033 COPRSQ9NQ92 184 aa12.18□□□□□ -0.46
HNRNPC-228ENST00000557033 SAGE1Q9NXZ1 904 aa12.18□□□□□ -0.46
HNRNPC-228ENST00000557033 SUGT1Q9Y2Z0 365 aa12.18□□□□□ -0.46
HNRNPC-228ENST00000557033 LRRFIP2Q9Y608 721 aaKnown RBP12.18□□□□□ -0.46
HNRNPC-228ENST00000557033 ECM29Q5VYK3 1845 aa12.17□□□□□ -0.46
HNRNPC-228ENST00000557033 POTEB2H3BUK9 544 aa12.17□□□□□ -0.46
HNRNPC-228ENST00000557033 BCAR3O75815 825 aa12.17□□□□□ -0.46
HNRNPC-228ENST00000557033 CCNYL3P0C7X3 344 aa12.17□□□□□ -0.46
HNRNPC-228ENST00000557033 SLC5A1P13866 664 aa12.17□□□□□ -0.46
HNRNPC-228ENST00000557033 IL15P40933 162 aaPredicted RBP12.17□□□□□ -0.46
HNRNPC-228ENST00000557033 BCAMP50895 628 aa12.17□□□□□ -0.46
HNRNPC-228ENST00000557033 COL19A1Q14993 1142 aa12.17□□□□□ -0.46
HNRNPC-228ENST00000557033 CCDC102BQ68D86 513 aa12.17□□□□□ -0.46
HNRNPC-228ENST00000557033 MOB2Q70IA6 237 aa12.17□□□□□ -0.46
HNRNPC-228ENST00000557033 RASAL3Q86YV0 1011 aa12.17□□□□□ -0.46
HNRNPC-228ENST00000557033 CSRNP1Q96S65 589 aa12.17□□□□□ -0.46
HNRNPC-228ENST00000557033 MEIS3Q99687 375 aa12.17□□□□□ -0.46
HNRNPC-228ENST00000557033 DCTN4Q9UJW0 460 aa12.17□□□□□ -0.46
HNRNPC-228ENST00000557033 SFI1A8K8P3 1242 aa12.16□□□□□ -0.46
HNRNPC-228ENST00000557033 PPP1R12BO60237 982 aaPredicted RBP12.16□□□□□ -0.46
HNRNPC-228ENST00000557033 RECKO95980 971 aa12.16□□□□□ -0.46
HNRNPC-228ENST00000557033 TRIM27P14373 513 aa12.16□□□□□ -0.46
HNRNPC-228ENST00000557033 CRKP46108 304 aa12.16□□□□□ -0.46
HNRNPC-228ENST00000557033 MTX1Q13505 466 aa12.16□□□□□ -0.46
HNRNPC-228ENST00000557033 TNFAIP1Q13829 316 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms