RNA–Protein interactions for RNA: ENST00000556772.5

NUMB-223, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best) BASIC

Gene NUMB, Length 5,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-223ENST00000556772 AATKQ6ZMQ8 1374 aa9.04□□□□□ -0.96
NUMB-223ENST00000556772 PTPN21Q16825 1174 aa9.04□□□□□ -0.96
NUMB-223ENST00000556772 GRIPAP1Q4V328 841 aa9.04□□□□□ -0.96
NUMB-223ENST00000556772 SRGAP1Q7Z6B7 1085 aa9.04□□□□□ -0.96
NUMB-223ENST00000556772 CCDC25Q86WR0 208 aa9.04□□□□□ -0.96
NUMB-223ENST00000556772 DZIP3Q86Y13 1208 aaKnown RBP9.04□□□□□ -0.96
NUMB-223ENST00000556772 ZNF496Q96IT1 587 aaPredicted RBP9.04□□□□□ -0.96
NUMB-223ENST00000556772 VPS54Q9P1Q0 977 aa9.04□□□□□ -0.96
NUMB-223ENST00000556772 CDC23Q9UJX2 597 aa9.04□□□□□ -0.96
NUMB-223ENST00000556772 ZNF532Q9HCE3 1301 aa9.04□□□□□ -0.96
NUMB-223ENST00000556772 C6orf229H3BNL8 230 aa9.04□□□□□ -0.96
NUMB-223ENST00000556772 PAK2Q13177 524 aa9.04□□□□□ -0.96
NUMB-223ENST00000556772 TRIML1Q8N9V2 468 aa9.04□□□□□ -0.96
NUMB-223ENST00000556772 FAM71BQ8TC56 605 aa9.04□□□□□ -0.96
NUMB-223ENST00000556772 SLC52A2Q9HAB3 445 aa9.04□□□□□ -0.96
NUMB-223ENST00000556772 TMOD2Q9NZR1 351 aa9.04□□□□□ -0.96
NUMB-223ENST00000556772 DDX41Q9UJV9 622 aaKnown RBP9.04□□□□□ -0.96
NUMB-223ENST00000556772 CLASP1Q7Z460 1538 aa9.04□□□□□ -0.96
NUMB-223ENST00000556772 IKBKBO14920 756 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 VIMP08670 466 aaKnown RBP9.03□□□□□ -0.96
NUMB-223ENST00000556772 C6orf163Q5TEZ5 329 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 PI4K2BQ8TCG2 481 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 CABS1Q96KC9 395 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 MED4Q9NPJ6 270 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 NIP7Q9Y221 180 aaKnown RBP eCLIP9.03□□□□□ -0.96
NUMB-223ENST00000556772 FGAP02671 866 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 GNGT1P63211 74 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 RESTQ13127 1097 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 SLC39A14Q15043 492 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 NECTIN1Q15223 517 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 RPGRQ92834 1020 aaKnown RBP9.03□□□□□ -0.96
NUMB-223ENST00000556772 KCNK9Q9NPC2 374 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 A0A1B0GUA9 196 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 BTBD18B2RXH4 712 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 A1BGP04217 495 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 CYP2E1P05181 493 aaPredicted RBP9.03□□□□□ -0.96
NUMB-223ENST00000556772 PUM3Q15397 648 aaKnown RBP9.03□□□□□ -0.96
NUMB-223ENST00000556772 CFAP221Q4G0U5 840 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 KLHL7Q8IXQ5 586 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 DDX12PQ92771 950 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 LRRC45Q96CN5 670 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 IFIH1Q9BYX4 1025 aaKnown RBP9.03□□□□□ -0.96
NUMB-223ENST00000556772 DBNLQ9UJU6 430 aaKnown RBP9.03□□□□□ -0.96
NUMB-223ENST00000556772 KCNJ18B7U540 433 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 KCNJ12Q14500 433 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 SLC9C1Q4G0N8 1177 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 SPATA1Q5VX52 437 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 SIRT1Q96EB6 747 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 EHMT1Q9H9B1 1298 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 POLR3EQ9NVU0 708 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 ZMYM6O95789 1325 aa9.03□□□□□ -0.96
NUMB-223ENST00000556772 ERCC3P19447 782 aa9.02□□□□□ -0.96
NUMB-223ENST00000556772 NAA30Q147X3 362 aaPredicted RBP9.02□□□□□ -0.96
NUMB-223ENST00000556772 PPP2R5BQ15173 497 aa9.02□□□□□ -0.96
NUMB-223ENST00000556772 DCAF17Q5H9S7 520 aaPredicted RBP9.02□□□□□ -0.96
NUMB-223ENST00000556772 RUFY4Q6ZNE9 571 aa9.02□□□□□ -0.96
NUMB-223ENST00000556772 LINC00301Q8NCQ3 95 aa9.02□□□□□ -0.96
NUMB-223ENST00000556772 BCAS4Q8TDM0 211 aa9.02□□□□□ -0.96
NUMB-223ENST00000556772 CARMIL3Q8ND23 1372 aa9.02□□□□□ -0.96
NUMB-223ENST00000556772 UGGT1Q9NYU2 1555 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 PNMA6AP0CW24 399 aaPredicted RBP9.02□□□□□ -0.97
NUMB-223ENST00000556772 TYW1BQ6NUM6 668 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 CCDC174Q6PII3 467 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 CMTR1Q8N1G2 835 aaKnown RBP9.02□□□□□ -0.97
NUMB-223ENST00000556772 RRP15Q9Y3B9 282 aaKnown RBP9.02□□□□□ -0.97
NUMB-223ENST00000556772 SAMM50Q9Y512 469 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 IKBKGQ9Y6K9 419 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 HLA-DOAP06340 250 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 MORC3Q14149 939 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 AKNAD1Q5T1N1 836 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 RGS22Q8NE09 1264 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 PARD6BQ9BYG5 372 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 HAUS4Q9H6D7 363 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 BTG4Q9NY30 223 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 ACTN2P35609 894 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 LIG3P49916 1009 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 CALCOCO2Q13137 446 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 VWA3BQ502W6 1294 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 CCDC65Q8IXS2 484 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 SLC35F6Q8N357 371 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 PLEKHA4Q9H4M7 779 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 FAM204AQ9H8W3 233 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 FAM207AQ9NSI2 230 aaPredicted RBP9.02□□□□□ -0.97
NUMB-223ENST00000556772 YEATS2Q9ULM3 1422 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 SAMD9LQ8IVG5 1584 aa9.02□□□□□ -0.97
NUMB-223ENST00000556772 E7EVH7 732 aa9.01□□□□□ -0.97
NUMB-223ENST00000556772 CEP104O60308 925 aa9.01□□□□□ -0.97
NUMB-223ENST00000556772 SARM1Q6SZW1 724 aa9.01□□□□□ -0.97
NUMB-223ENST00000556772 NBPF5PQ86XG9 351 aaPredicted RBP9.01□□□□□ -0.97
NUMB-223ENST00000556772 C2CD5Q86YS7 1000 aa9.01□□□□□ -0.97
NUMB-223ENST00000556772 COPRSQ9NQ92 184 aa9.01□□□□□ -0.97
NUMB-223ENST00000556772 HOMER2Q9NSB8 354 aa9.01□□□□□ -0.97
NUMB-223ENST00000556772 SWAP70Q9UH65 585 aa9.01□□□□□ -0.97
NUMB-223ENST00000556772 EPN1Q9Y6I3 576 aaPredicted RBP9.01□□□□□ -0.97
NUMB-223ENST00000556772 CAPN7Q9Y6W3 813 aa9.01□□□□□ -0.97
NUMB-223ENST00000556772 CCDC151A5D8V7 595 aa9.01□□□□□ -0.97
NUMB-223ENST00000556772 CASP14P31944 242 aa9.01□□□□□ -0.97
NUMB-223ENST00000556772 HNRNPH2P55795 449 aaKnown RBP9.01□□□□□ -0.97
NUMB-223ENST00000556772 LACTBP83111 547 aaPredicted RBP9.01□□□□□ -0.97
NUMB-223ENST00000556772 HS2ST1Q7LGA3 356 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms