RNA–Protein interactions for RNA: ENST00000556725.1

SYNE2-222, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 672 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-222ENST00000556725 OGDHLQ9ULD0 1010 aa10.79□□□□□ -0.68
SYNE2-222ENST00000556725 GAKO14976 1311 aa10.79□□□□□ -0.68
SYNE2-222ENST00000556725 PFASO15067 1338 aa10.79□□□□□ -0.68
SYNE2-222ENST00000556725 SALL1Q9NSC2 1324 aa10.79□□□□□ -0.68
SYNE2-222ENST00000556725 RFX7Q2KHR2 1363 aa10.78□□□□□ -0.68
SYNE2-222ENST00000556725 TRIB2Q92519 343 aa10.78□□□□□ -0.68
SYNE2-222ENST00000556725 ASCC2Q9H1I8 757 aaPredicted RBP10.78□□□□□ -0.68
SYNE2-222ENST00000556725 GNL3LQ9NVN8 582 aaKnown RBP10.78□□□□□ -0.68
SYNE2-222ENST00000556725 DENND2AQ9ULE3 1009 aa10.78□□□□□ -0.68
SYNE2-222ENST00000556725 PRUNE2Q8WUY3 3088 aa10.78□□□□□ -0.68
SYNE2-222ENST00000556725 CYP2B6P20813 491 aa10.77□□□□□ -0.69
SYNE2-222ENST00000556725 BTDP43251 543 aa10.77□□□□□ -0.69
SYNE2-222ENST00000556725 HMGCS2P54868 508 aa10.77□□□□□ -0.69
SYNE2-222ENST00000556725 ZNF687Q8N1G0 1237 aa10.77□□□□□ -0.69
SYNE2-222ENST00000556725 PROCA1Q8NCQ7 364 aaPredicted RBP10.77□□□□□ -0.69
SYNE2-222ENST00000556725 ZNF384Q8TF68 577 aa10.77□□□□□ -0.69
SYNE2-222ENST00000556725 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.77□□□□□ -0.69
SYNE2-222ENST00000556725 MRS2Q9HD23 443 aa10.77□□□□□ -0.69
SYNE2-222ENST00000556725 CEP126Q9P2H0 1117 aa10.77□□□□□ -0.69
SYNE2-222ENST00000556725 ABCF2Q9UG63 623 aa10.77□□□□□ -0.69
SYNE2-222ENST00000556725 PNMA3Q9UL41 463 aa10.77□□□□□ -0.69
SYNE2-222ENST00000556725 TBC1D12O60347 775 aa10.76□□□□□ -0.69
SYNE2-222ENST00000556725 GCLCP48506 637 aaPredicted RBP10.76□□□□□ -0.69
SYNE2-222ENST00000556725 RHBDL3P58872 404 aa10.76□□□□□ -0.69
SYNE2-222ENST00000556725 TIMM10P62072 90 aa10.76□□□□□ -0.69
SYNE2-222ENST00000556725 MDM2Q00987 491 aaPredicted RBP10.76□□□□□ -0.69
SYNE2-222ENST00000556725 LRRC26Q2I0M4 334 aa10.76□□□□□ -0.69
SYNE2-222ENST00000556725 MAP3K21Q5TCX8 1036 aa10.76□□□□□ -0.69
SYNE2-222ENST00000556725 CCDC102BQ68D86 513 aa10.76□□□□□ -0.69
SYNE2-222ENST00000556725 DZIP1Q86YF9 867 aaKnown RBP10.76□□□□□ -0.69
SYNE2-222ENST00000556725 ZNF280CQ8ND82 737 aa10.76□□□□□ -0.69
SYNE2-222ENST00000556725 FAM161BQ96MY7 647 aa10.76□□□□□ -0.69
SYNE2-222ENST00000556725 ZSWIM6Q9HCJ5 1215 aa10.76□□□□□ -0.69
SYNE2-222ENST00000556725 PA2G4Q9UQ80 394 aaKnown RBP10.76□□□□□ -0.69
SYNE2-222ENST00000556725 LOC285556D6RIA3 1793 aa10.75□□□□□ -0.69
SYNE2-222ENST00000556725 VCANP13611 3396 aa10.75□□□□□ -0.69
SYNE2-222ENST00000556725 SEMA3EO15041 775 aa10.75□□□□□ -0.69
SYNE2-222ENST00000556725 COL6A1P12109 1028 aa10.75□□□□□ -0.69
SYNE2-222ENST00000556725 CACNB2Q08289 660 aaPredicted RBP10.75□□□□□ -0.69
SYNE2-222ENST00000556725 RASGRF1Q13972 1273 aa10.75□□□□□ -0.69
SYNE2-222ENST00000556725 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.75□□□□□ -0.69
SYNE2-222ENST00000556725 GUCD1Q96NT3 240 aa10.75□□□□□ -0.69
SYNE2-222ENST00000556725 P2RX7Q99572 595 aaKnown RBP10.75□□□□□ -0.69
SYNE2-222ENST00000556725 OSBPL5Q9H0X9 879 aaPredicted RBP10.75□□□□□ -0.69
SYNE2-222ENST00000556725 ATAD5Q96QE3 1844 aa10.74□□□□□ -0.69
SYNE2-222ENST00000556725 GPR75-ASB3A0A0A6YYF3 556 aa10.74□□□□□ -0.69
SYNE2-222ENST00000556725 USP17L5A8MUK1 530 aa10.74□□□□□ -0.69
SYNE2-222ENST00000556725 CIAO1O76071 339 aa10.74□□□□□ -0.69
SYNE2-222ENST00000556725 CCND3P30281 292 aaPredicted RBP10.74□□□□□ -0.69
SYNE2-222ENST00000556725 CAP2P40123 477 aa10.74□□□□□ -0.69
SYNE2-222ENST00000556725 JAG1P78504 1218 aa10.74□□□□□ -0.69
SYNE2-222ENST00000556725 MECOMQ03112 1051 aa10.74□□□□□ -0.69
SYNE2-222ENST00000556725 CCL14Q16627 93 aa10.74□□□□□ -0.69
SYNE2-222ENST00000556725 Q3C1V9 767 aa10.74□□□□□ -0.69
SYNE2-222ENST00000556725 SH3D19Q5HYK7 790 aa10.74□□□□□ -0.69
SYNE2-222ENST00000556725 ZGPATQ8N5A5 531 aaKnown RBP10.74□□□□□ -0.69
SYNE2-222ENST00000556725 SSH1Q8WYL5 1049 aa10.74□□□□□ -0.69
SYNE2-222ENST00000556725 TXNRD2Q9NNW7 524 aa10.74□□□□□ -0.69
SYNE2-222ENST00000556725 MORF4L1Q9UBU8 362 aa10.74□□□□□ -0.69
SYNE2-222ENST00000556725 MROH7-TTC4A0A0A0MT08 1334 aa10.74□□□□□ -0.69
SYNE2-222ENST00000556725 PTPRCP08575 1304 aa10.74□□□□□ -0.69
SYNE2-222ENST00000556725 PABPC4Q13310 644 aaKnown RBP eCLIP10.73□□□□□ -0.69
SYNE2-222ENST00000556725 SHROOM1Q2M3G4 852 aaPredicted RBP10.73□□□□□ -0.69
SYNE2-222ENST00000556725 POTEEQ6S8J3 1075 aa10.73□□□□□ -0.69
SYNE2-222ENST00000556725 SLF2Q8IX21 1173 aa10.73□□□□□ -0.69
SYNE2-222ENST00000556725 USP6NLQ92738 828 aa10.73□□□□□ -0.69
SYNE2-222ENST00000556725 NUDT12Q9BQG2 462 aa10.73□□□□□ -0.69
SYNE2-222ENST00000556725 RBPJLQ9UBG7 517 aa10.73□□□□□ -0.69
SYNE2-222ENST00000556725 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.73□□□□□ -0.69
SYNE2-222ENST00000556725 SPTBN5Q9NRC6 3674 aaKnown RBP10.72□□□□□ -0.69
SYNE2-222ENST00000556725 IL15P40933 162 aaPredicted RBP10.72□□□□□ -0.69
SYNE2-222ENST00000556725 MTMR2Q13614 643 aa10.72□□□□□ -0.69
SYNE2-222ENST00000556725 SPTY2D1Q68D10 685 aaPredicted RBP10.72□□□□□ -0.69
SYNE2-222ENST00000556725 PI16Q6UXB8 463 aa10.72□□□□□ -0.69
SYNE2-222ENST00000556725 TBC1D9Q6ZT07 1266 aa10.72□□□□□ -0.69
SYNE2-222ENST00000556725 ERICH6Q7L0X2 663 aa10.72□□□□□ -0.69
SYNE2-222ENST00000556725 XAGE2Q96GT9 111 aa10.72□□□□□ -0.69
SYNE2-222ENST00000556725 PORCNQ9H237 461 aa10.72□□□□□ -0.69
SYNE2-222ENST00000556725 XRCC5P13010 732 aaKnown RBP10.71□□□□□ -0.69
SYNE2-222ENST00000556725 ZKSCAN1P17029 563 aaPredicted RBP10.71□□□□□ -0.69
SYNE2-222ENST00000556725 HOXA7P31268 230 aaPredicted RBP10.71□□□□□ -0.69
SYNE2-222ENST00000556725 HERVK_113P62684 666 aa10.71□□□□□ -0.69
SYNE2-222ENST00000556725 IRX3P78415 501 aaPredicted RBP10.71□□□□□ -0.69
SYNE2-222ENST00000556725 MORN1Q5T089 497 aa10.71□□□□□ -0.69
SYNE2-222ENST00000556725 FAM109BQ6ICB4 259 aaPredicted RBP10.71□□□□□ -0.69
SYNE2-222ENST00000556725 FAM9BQ8IZU0 186 aa10.71□□□□□ -0.69
SYNE2-222ENST00000556725 GPRC5AQ8NFJ5 357 aa10.71□□□□□ -0.69
SYNE2-222ENST00000556725 WDR18Q9BV38 432 aa10.71□□□□□ -0.69
SYNE2-222ENST00000556725 TBC1D2Q9BYX2 928 aa10.71□□□□□ -0.69
SYNE2-222ENST00000556725 PDS5AQ29RF7 1337 aaKnown RBP10.7□□□□□ -0.7
SYNE2-222ENST00000556725 ZNF521Q96K83 1311 aa10.7□□□□□ -0.7
SYNE2-222ENST00000556725 A0A1B0GUL7 405 aa10.7□□□□□ -0.7
SYNE2-222ENST00000556725 UBTFL1P0CB47 393 aaPredicted RBP10.7□□□□□ -0.7
SYNE2-222ENST00000556725 BACE1P56817 501 aa10.7□□□□□ -0.7
SYNE2-222ENST00000556725 TFCP2Q12800 502 aa10.7□□□□□ -0.7
SYNE2-222ENST00000556725 GPR142Q7Z601 462 aa10.7□□□□□ -0.7
SYNE2-222ENST00000556725 SH3RF3Q8TEJ3 882 aaPredicted RBP10.7□□□□□ -0.7
SYNE2-222ENST00000556725 SOCS4Q8WXH5 440 aa10.7□□□□□ -0.7
SYNE2-222ENST00000556725 NSUN4Q96CB9 384 aaKnown RBP10.7□□□□□ -0.7
SYNE2-222ENST00000556725 PAGR1Q9BTK6 254 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms