RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 NBPF11Q86T75 865 aa6.22□□□□□ -1.41
GPHN-213ENST00000556501 LRRC8AQ8IWT6 810 aa6.22□□□□□ -1.41
GPHN-213ENST00000556501 DIS3L2Q8IYB7 885 aaKnown RBP6.22□□□□□ -1.41
GPHN-213ENST00000556501 ELOA2Q8IYF1 753 aaPredicted RBP6.22□□□□□ -1.41
GPHN-213ENST00000556501 CRACR2BQ8N4Y2 399 aaPredicted RBP6.22□□□□□ -1.41
GPHN-213ENST00000556501 MIGA1Q8NAN2 632 aa6.22□□□□□ -1.41
GPHN-213ENST00000556501 ESR2Q92731 530 aa6.22□□□□□ -1.41
GPHN-213ENST00000556501 ERCC4Q92889 916 aaPredicted RBP6.22□□□□□ -1.41
GPHN-213ENST00000556501 NOL10Q9BSC4 688 aaKnown RBP6.22□□□□□ -1.41
GPHN-213ENST00000556501 UBAC1Q9BSL1 405 aa6.22□□□□□ -1.41
GPHN-213ENST00000556501 OSBPL5Q9H0X9 879 aaPredicted RBP6.22□□□□□ -1.41
GPHN-213ENST00000556501 PDCL3Q9H2J4 239 aa6.22□□□□□ -1.41
GPHN-213ENST00000556501 FOXP1Q9H334 677 aaPredicted RBP6.22□□□□□ -1.41
GPHN-213ENST00000556501 KCND1Q9NSA2 647 aa6.22□□□□□ -1.41
GPHN-213ENST00000556501 IMPACTQ9P2X3 320 aa6.22□□□□□ -1.41
GPHN-213ENST00000556501 TNKSO95271 1327 aa6.22□□□□□ -1.41
GPHN-213ENST00000556501 SMTNL1A8MU46 457 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 KCNQ2O43526 872 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 MYO1BO43795 1136 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 GABBR2O75899 941 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 DDAH1O94760 285 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 FGRP09769 529 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 GUCY1A2P33402 732 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 PSEN1P49768 467 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 TOB1P50616 345 aaPredicted RBP6.21□□□□□ -1.42
GPHN-213ENST00000556501 CCZ1BP86790 482 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 CCZ1P86791 482 aaPredicted RBP6.21□□□□□ -1.42
GPHN-213ENST00000556501 FUT2Q10981 343 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 NCAPHQ15003 741 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 VPS72Q15906 364 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 CAVIN4Q5BKX8 364 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 RILPL1Q5EBL4 403 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 RRP12Q5JTH9 1297 aaKnown RBP6.21□□□□□ -1.42
GPHN-213ENST00000556501 KRBA2Q6ZNG9 492 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 FBXO33Q7Z6M2 555 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 METTL16Q86W50 562 aaKnown RBP6.21□□□□□ -1.42
GPHN-213ENST00000556501 STK11IPQ8N1F8 1099 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 KRI1Q8N9T8 703 aaKnown RBP6.21□□□□□ -1.42
GPHN-213ENST00000556501 FANCBQ8NB91 859 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 CCDC150Q8NCX0 1101 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 ZNF384Q8TF68 577 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 FAM84BQ96KN1 310 aaPredicted RBP6.21□□□□□ -1.42
GPHN-213ENST00000556501 RNF26Q9BY78 433 aaPredicted RBP6.21□□□□□ -1.42
GPHN-213ENST00000556501 NYXQ9GZU5 481 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 BCL2L12Q9HB09 334 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 TOMM22Q9NS69 142 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 RAI14Q9P0K7 980 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 FBXO2Q9UK22 296 aaPredicted RBP6.21□□□□□ -1.42
GPHN-213ENST00000556501 PCDHB8Q9UN66 801 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 MINPP1Q9UNW1 487 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 IQSEC3Q9UPP2 1182 aaPredicted RBP6.21□□□□□ -1.42
GPHN-213ENST00000556501 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.21□□□□□ -1.42
GPHN-213ENST00000556501 PCDHB13Q9Y5F0 798 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 LRRC37AA6NMS7 1700 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 CDK5RAP2Q96SN8 1893 aa6.21□□□□□ -1.42
GPHN-213ENST00000556501 NUTM2BA6NNL0 878 aaPredicted RBP6.2□□□□□ -1.42
GPHN-213ENST00000556501 NUTM2EB1AL46 878 aaPredicted RBP6.2□□□□□ -1.42
GPHN-213ENST00000556501 BTBD18B2RXH4 712 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 UBE2Q2LH0YL09 131 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 BIN1O00499 593 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 CTIFO43310 598 aaKnown RBP6.2□□□□□ -1.42
GPHN-213ENST00000556501 ORC4O43929 436 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 IGSF3O75054 1194 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 RPS6KA4O75676 772 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 CALM1P0DP23 149 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 CALM2P0DP24 149 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 CALM3P0DP25 149 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 PTPREP23469 700 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 KCNJ6P48051 423 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 DYNLL1P63167 89 aaKnown RBP6.2□□□□□ -1.42
GPHN-213ENST00000556501 RBM10P98175 930 aaKnown RBP6.2□□□□□ -1.42
GPHN-213ENST00000556501 MYL5Q02045 173 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 PNOCQ13519 176 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 ARID5BQ14865 1188 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 TBC1D9BQ66K14 1250 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 NUTM2AQ8IVF1 878 aaPredicted RBP6.2□□□□□ -1.42
GPHN-213ENST00000556501 ENAHQ8N8S7 591 aaPredicted RBP6.2□□□□□ -1.42
GPHN-213ENST00000556501 ZNF579Q8NAF0 562 aaKnown RBP6.2□□□□□ -1.42
GPHN-213ENST00000556501 SDR42E1Q8WUS8 393 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 CELF1Q92879 486 aaKnown RBP6.2□□□□□ -1.42
GPHN-213ENST00000556501 FBXW7Q969H0 707 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 CLIC6Q96NY7 704 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 ZSCAN10Q96SZ4 725 aaPredicted RBP6.2□□□□□ -1.42
GPHN-213ENST00000556501 ZKSCAN3Q9BRR0 538 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 XPO4Q9C0E2 1151 aaKnown RBP6.2□□□□□ -1.42
GPHN-213ENST00000556501 ANKRD2Q9GZV1 360 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 TSPYL2Q9H2G4 693 aaPredicted RBP6.2□□□□□ -1.42
GPHN-213ENST00000556501 RBM28Q9NW13 759 aaKnown RBP6.2□□□□□ -1.42
GPHN-213ENST00000556501 FAM13BQ9NYF5 915 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 PODXL2Q9NZ53 605 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 ABCF2Q9UG63 623 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 NARFQ9UHQ1 456 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 KCNH3Q9ULD8 1083 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 KCNJ14Q9UNX9 436 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 CNTNAP5Q8WYK1 1306 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 IRS2Q9Y4H2 1338 aa6.2□□□□□ -1.42
GPHN-213ENST00000556501 UBR3Q6ZT12 1888 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 ROBO3Q96MS0 1386 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 MINDY4BA8MYZ0 360 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 PRPF3O43395 683 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms