RNA–Protein interactions for RNA: ENST00000555643.1

AL139316.1-201, humanhuman

TSL 3 BASIC

Gene AL139316.1, Length 568 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139316.1-201ENST00000555643 CTR9Q6PD62 1173 aa16.1■□□□□ 0.17
AL139316.1-201ENST00000555643 IFNL3Q8IZI9 196 aa16.1■□□□□ 0.17
AL139316.1-201ENST00000555643 SWAP70Q9UH65 585 aa16.1■□□□□ 0.17
AL139316.1-201ENST00000555643 CA12O43570 354 aa16.09■□□□□ 0.17
AL139316.1-201ENST00000555643 ASNSP08243 561 aa16.09■□□□□ 0.17
AL139316.1-201ENST00000555643 HSPA1AP0DMV8 641 aaKnown RBP16.09■□□□□ 0.17
AL139316.1-201ENST00000555643 HSPA1BP0DMV9 641 aaKnown RBP16.09■□□□□ 0.17
AL139316.1-201ENST00000555643 GTF2A2P52657 109 aa16.09■□□□□ 0.17
AL139316.1-201ENST00000555643 CCDC129Q6ZRS4 1044 aa16.09■□□□□ 0.17
AL139316.1-201ENST00000555643 TBC1D2Q9BYX2 928 aa16.09■□□□□ 0.17
AL139316.1-201ENST00000555643 EPB41L4AQ9HCS5 686 aaPredicted RBP16.09■□□□□ 0.17
AL139316.1-201ENST00000555643 TESPA1A2RU30 521 aaPredicted RBP16.08■□□□□ 0.16
AL139316.1-201ENST00000555643 IRF6O14896 467 aa16.08■□□□□ 0.16
AL139316.1-201ENST00000555643 CYP2D6P10635 497 aa16.08■□□□□ 0.16
AL139316.1-201ENST00000555643 SHMT1P34896 483 aa16.08■□□□□ 0.16
AL139316.1-201ENST00000555643 SNAPC2Q13487 334 aa16.08■□□□□ 0.16
AL139316.1-201ENST00000555643 RRP1BQ14684 758 aaKnown RBP16.08■□□□□ 0.16
AL139316.1-201ENST00000555643 CERKLQ49MI3 558 aaPredicted RBP16.08■□□□□ 0.16
AL139316.1-201ENST00000555643 CWC27Q6UX04 472 aaKnown RBP16.08■□□□□ 0.16
AL139316.1-201ENST00000555643 MS4A4AQ96JQ5 239 aa16.08■□□□□ 0.16
AL139316.1-201ENST00000555643 NAPBQ9H115 298 aa16.08■□□□□ 0.16
AL139316.1-201ENST00000555643 ZHX2Q9Y6X8 837 aa16.08■□□□□ 0.16
AL139316.1-201ENST00000555643 CCDC171Q6TFL3 1326 aa16.08■□□□□ 0.16
AL139316.1-201ENST00000555643 CYP2D7A0A087X1C5 515 aa16.07■□□□□ 0.16
AL139316.1-201ENST00000555643 CXCL11O14625 94 aa16.07■□□□□ 0.16
AL139316.1-201ENST00000555643 EVX2Q03828 476 aa16.07■□□□□ 0.16
AL139316.1-201ENST00000555643 C16orf86Q6ZW13 317 aa16.07■□□□□ 0.16
AL139316.1-201ENST00000555643 SAGE1Q9NXZ1 904 aa16.07■□□□□ 0.16
AL139316.1-201ENST00000555643 KCNH4Q9UQ05 1017 aa16.07■□□□□ 0.16
AL139316.1-201ENST00000555643 AFG3L2Q9Y4W6 797 aa16.07■□□□□ 0.16
AL139316.1-201ENST00000555643 ROBO3Q96MS0 1386 aa16.07■□□□□ 0.16
AL139316.1-201ENST00000555643 PTPRFP10586 1907 aa16.06■□□□□ 0.16
AL139316.1-201ENST00000555643 CCL15-CCL14A0A0B4J2E2 113 aa16.06■□□□□ 0.16
AL139316.1-201ENST00000555643 USP17L5A8MUK1 530 aa16.06■□□□□ 0.16
AL139316.1-201ENST00000555643 MINDY4BA8MYZ0 360 aa16.06■□□□□ 0.16
AL139316.1-201ENST00000555643 GDF11O95390 407 aa16.06■□□□□ 0.16
AL139316.1-201ENST00000555643 HSPD1P10809 573 aaKnown RBP16.06■□□□□ 0.16
AL139316.1-201ENST00000555643 CETPP11597 493 aa16.06■□□□□ 0.16
AL139316.1-201ENST00000555643 CCL15Q16663 113 aa16.06■□□□□ 0.16
AL139316.1-201ENST00000555643 BMP2KLQ5H9B9 411 aa16.06■□□□□ 0.16
AL139316.1-201ENST00000555643 VPS53Q5VIR6 699 aa16.06■□□□□ 0.16
AL139316.1-201ENST00000555643 OTUD7BQ6GQQ9 843 aa16.06■□□□□ 0.16
AL139316.1-201ENST00000555643 ZNF589Q86UQ0 364 aaPredicted RBP16.06■□□□□ 0.16
AL139316.1-201ENST00000555643 RUFY2Q8WXA3 655 aa16.06■□□□□ 0.16
AL139316.1-201ENST00000555643 DYNLL2Q96FJ2 89 aa16.06■□□□□ 0.16
AL139316.1-201ENST00000555643 AS3MTQ9HBK9 375 aa16.06■□□□□ 0.16
AL139316.1-201ENST00000555643 CABP5Q9NP86 173 aa16.06■□□□□ 0.16
AL139316.1-201ENST00000555643 ZBTB21Q9ULJ3 1066 aa16.06■□□□□ 0.16
AL139316.1-201ENST00000555643 ZMYM6O95789 1325 aa16.05■□□□□ 0.16
AL139316.1-201ENST00000555643 RAD50Q92878 1312 aa16.05■□□□□ 0.16
AL139316.1-201ENST00000555643 FOXP2O15409 715 aa16.05■□□□□ 0.16
AL139316.1-201ENST00000555643 ALDH1A1P00352 501 aa16.05■□□□□ 0.16
AL139316.1-201ENST00000555643 GH2P01242 217 aa16.05■□□□□ 0.16
AL139316.1-201ENST00000555643 CHMLP26374 656 aa16.05■□□□□ 0.16
AL139316.1-201ENST00000555643 CDK8P49336 464 aa16.05■□□□□ 0.16
AL139316.1-201ENST00000555643 ALX1Q15699 326 aa16.05■□□□□ 0.16
AL139316.1-201ENST00000555643 ABCB5Q2M3G0 1257 aa16.05■□□□□ 0.16
AL139316.1-201ENST00000555643 SKAP1Q86WV1 359 aa16.05■□□□□ 0.16
AL139316.1-201ENST00000555643 IFNL1Q8IU54 200 aa16.05■□□□□ 0.16
AL139316.1-201ENST00000555643 ZNF280CQ8ND82 737 aa16.05■□□□□ 0.16
AL139316.1-201ENST00000555643 ZNF287Q9HBT7 754 aa16.05■□□□□ 0.16
AL139316.1-201ENST00000555643 RNF186Q9NXI6 227 aa16.05■□□□□ 0.16
AL139316.1-201ENST00000555643 TRPA1O75762 1119 aa16.04■□□□□ 0.16
AL139316.1-201ENST00000555643 SLC3A2P08195 630 aaKnown RBP16.04■□□□□ 0.16
AL139316.1-201ENST00000555643 JAG1P78504 1218 aa16.04■□□□□ 0.16
AL139316.1-201ENST00000555643 SLC44A5Q8NCS7 719 aa16.04■□□□□ 0.16
AL139316.1-201ENST00000555643 BRI3BPQ8WY22 251 aa16.04■□□□□ 0.16
AL139316.1-201ENST00000555643 CCDC17Q96LX7 622 aa16.04■□□□□ 0.16
AL139316.1-201ENST00000555643 WDR18Q9BV38 432 aa16.04■□□□□ 0.16
AL139316.1-201ENST00000555643 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.04■□□□□ 0.16
AL139316.1-201ENST00000555643 A0A0G2JLL6 359 aaPredicted RBP16.03■□□□□ 0.16
AL139316.1-201ENST00000555643 TRIM75PA6NK02 468 aa16.03■□□□□ 0.16
AL139316.1-201ENST00000555643 SMIM22K7EJ46 135 aa16.03■□□□□ 0.16
AL139316.1-201ENST00000555643 IGF2BP3O00425 579 aaKnown RBP eCLIP16.03■□□□□ 0.16
AL139316.1-201ENST00000555643 FOXN1O15353 648 aa16.03■□□□□ 0.16
AL139316.1-201ENST00000555643 FGAP02671 866 aa16.03■□□□□ 0.16
AL139316.1-201ENST00000555643 CTCFP49711 727 aaPredicted RBP16.03■□□□□ 0.16
AL139316.1-201ENST00000555643 RAB3GAP1Q15042 981 aa16.03■□□□□ 0.16
AL139316.1-201ENST00000555643 SHROOM1Q2M3G4 852 aaPredicted RBP16.03■□□□□ 0.16
AL139316.1-201ENST00000555643 FASTKD5Q7L8L6 764 aaKnown RBP16.03■□□□□ 0.16
AL139316.1-201ENST00000555643 PRRT2Q7Z6L0 340 aaPredicted RBP16.03■□□□□ 0.16
AL139316.1-201ENST00000555643 CCDC84Q86UT8 332 aaPredicted RBP16.03■□□□□ 0.16
AL139316.1-201ENST00000555643 PTPN18Q99952 460 aa16.03■□□□□ 0.16
AL139316.1-201ENST00000555643 CFHR5Q9BXR6 569 aa16.03■□□□□ 0.16
AL139316.1-201ENST00000555643 MKNK2Q9HBH9 465 aa16.03■□□□□ 0.16
AL139316.1-201ENST00000555643 ZCCHC17Q9NP64 241 aaKnown RBP16.03■□□□□ 0.16
AL139316.1-201ENST00000555643 LOC285556D6RIA3 1793 aa16.03■□□□□ 0.16
AL139316.1-201ENST00000555643 MPHOSPH10O00566 681 aaKnown RBP16.02■□□□□ 0.16
AL139316.1-201ENST00000555643 PDE4BQ07343 736 aa16.02■□□□□ 0.16
AL139316.1-201ENST00000555643 PPARAQ07869 468 aa16.02■□□□□ 0.16
AL139316.1-201ENST00000555643 SPP2Q13103 211 aa16.02■□□□□ 0.16
AL139316.1-201ENST00000555643 TMEM179Q6ZVK1 233 aa16.02■□□□□ 0.16
AL139316.1-201ENST00000555643 DSCC1Q9BVC3 393 aa16.02■□□□□ 0.16
AL139316.1-201ENST00000555643 ANAPC4Q9UJX5 808 aa16.02■□□□□ 0.16
AL139316.1-201ENST00000555643 LAMA4Q16363 1823 aa16.01■□□□□ 0.15
AL139316.1-201ENST00000555643 USP17L10C9JJH3 530 aa16.01■□□□□ 0.15
AL139316.1-201ENST00000555643 BACE1P56817 501 aa16.01■□□□□ 0.15
AL139316.1-201ENST00000555643 GREB1LQ9C091 1923 aaPredicted RBP16■□□□□ 0.15
AL139316.1-201ENST00000555643 C19orf81C9J6K1 198 aa16■□□□□ 0.15
AL139316.1-201ENST00000555643 BTBD19C9JJ37 291 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms