RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, human

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-223	ENST00000555573	R3HCC1	Q9Y3T6	440 aa	Known RBP	7.12	□□□□□ -1.27
KTN1-223	ENST00000555573	SHROOM4	Q9ULL8	1493 aa		7.11	□□□□□ -1.27
KTN1-223	ENST00000555573	SART1	O43290	800 aa	Known RBP	7.11	□□□□□ -1.27
KTN1-223	ENST00000555573	ACR	P10323	421 aa		7.11	□□□□□ -1.27
KTN1-223	ENST00000555573	NME1	P15531	152 aa	Known RBP	7.11	□□□□□ -1.27
KTN1-223	ENST00000555573	GUCY2C	P25092	1073 aa		7.11	□□□□□ -1.27
KTN1-223	ENST00000555573	SLBP	Q14493	270 aa	Known RBP eCLIP	7.11	□□□□□ -1.27
KTN1-223	ENST00000555573	CDC37L1	Q7L3B6	337 aa		7.11	□□□□□ -1.27
KTN1-223	ENST00000555573	TTC6	Q86TZ1	520 aa		7.11	□□□□□ -1.27
KTN1-223	ENST00000555573	SMYD4	Q8IYR2	804 aa	Predicted RBP	7.11	□□□□□ -1.27
KTN1-223	ENST00000555573	FAM13C	Q8NE31	585 aa		7.11	□□□□□ -1.27
KTN1-223	ENST00000555573	DPH2	Q9BQC3	489 aa	Predicted RBP	7.11	□□□□□ -1.27
KTN1-223	ENST00000555573	CNNM2	Q9H8M5	875 aa		7.11	□□□□□ -1.27
KTN1-223	ENST00000555573		A0A1W2PQH9	124 aa		7.1	□□□□□ -1.27
KTN1-223	ENST00000555573	RAB6A	P20340	208 aa		7.1	□□□□□ -1.27
KTN1-223	ENST00000555573	CASP7	P55210	303 aa		7.1	□□□□□ -1.27
KTN1-223	ENST00000555573	ADGRE1	Q14246	886 aa		7.1	□□□□□ -1.27
KTN1-223	ENST00000555573	BMS1	Q14692	1282 aa	Known RBP	7.1	□□□□□ -1.27
KTN1-223	ENST00000555573	ZYX	Q15942	572 aa	Known RBP	7.1	□□□□□ -1.27
KTN1-223	ENST00000555573	CDCP2	Q5VXM1	449 aa		7.1	□□□□□ -1.27
KTN1-223	ENST00000555573	MRPL41	Q8IXM3	137 aa	Known RBP	7.1	□□□□□ -1.27
KTN1-223	ENST00000555573	C19orf47	Q8N9M1	422 aa	Known RBP	7.1	□□□□□ -1.27
KTN1-223	ENST00000555573	SLC9A7	Q96T83	725 aa		7.1	□□□□□ -1.27
KTN1-223	ENST00000555573	KRTAP9-6	A0A140TA67	174 aa		7.1	□□□□□ -1.27
KTN1-223	ENST00000555573	GAS2	O43903	313 aa	Known RBP	7.1	□□□□□ -1.27
KTN1-223	ENST00000555573	SLC6A19	Q695T7	634 aa		7.1	□□□□□ -1.27
KTN1-223	ENST00000555573	CDPF1	Q6NVV7	123 aa		7.1	□□□□□ -1.27
KTN1-223	ENST00000555573	GIMAP6	Q6P9H5	292 aa		7.1	□□□□□ -1.27
KTN1-223	ENST00000555573	SLFN12	Q8IYM2	578 aa		7.1	□□□□□ -1.27
KTN1-223	ENST00000555573	TAB3	Q8N5C8	712 aa	Predicted RBP	7.1	□□□□□ -1.27
KTN1-223	ENST00000555573	MICAL1	Q8TDZ2	1067 aa		7.1	□□□□□ -1.27
KTN1-223	ENST00000555573	FAM46A	Q96IP4	442 aa	Known RBP	7.1	□□□□□ -1.27
KTN1-223	ENST00000555573	ACSS3	Q9H6R3	686 aa		7.1	□□□□□ -1.27
KTN1-223	ENST00000555573	SSU72	Q9NP77	194 aa	Known RBP	7.1	□□□□□ -1.27
KTN1-223	ENST00000555573	FAM86C2P	A6NEL3	165 aa		7.09	□□□□□ -1.27
KTN1-223	ENST00000555573		K7ELQ4	463 aa	Predicted RBP	7.09	□□□□□ -1.27
KTN1-223	ENST00000555573	TNFRSF10C	O14798	259 aa		7.09	□□□□□ -1.27
KTN1-223	ENST00000555573	U2SURP	O15042	1029 aa	Known RBP	7.09	□□□□□ -1.27
KTN1-223	ENST00000555573	RAG1	P15918	1043 aa		7.09	□□□□□ -1.27
KTN1-223	ENST00000555573	POLR2B	P30876	1174 aa	Known RBP	7.09	□□□□□ -1.27
KTN1-223	ENST00000555573	USP11	P51784	963 aa		7.09	□□□□□ -1.27
KTN1-223	ENST00000555573	YARS	P54577	528 aa	Known RBP	7.09	□□□□□ -1.27
KTN1-223	ENST00000555573	PRAMEF13	Q5VWM6	474 aa		7.09	□□□□□ -1.27
KTN1-223	ENST00000555573	LARP1B	Q659C4	914 aa	Known RBP	7.09	□□□□□ -1.27
KTN1-223	ENST00000555573	UNC5A	Q6ZN44	842 aa		7.09	□□□□□ -1.27
KTN1-223	ENST00000555573	KCT2	Q8NC54	265 aa		7.09	□□□□□ -1.27
KTN1-223	ENST00000555573	MEGF10	Q96KG7	1140 aa		7.09	□□□□□ -1.27
KTN1-223	ENST00000555573	ST7	Q9NRC1	585 aa		7.09	□□□□□ -1.27
KTN1-223	ENST00000555573	SIRPG	Q9P1W8	387 aa		7.09	□□□□□ -1.27
KTN1-223	ENST00000555573	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	7.08	□□□□□ -1.28
KTN1-223	ENST00000555573	SGO2	Q562F6	1265 aa		7.08	□□□□□ -1.28
KTN1-223	ENST00000555573	INTS3	Q68E01	1043 aa	Known RBP	7.08	□□□□□ -1.28
KTN1-223	ENST00000555573	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	7.08	□□□□□ -1.28
KTN1-223	ENST00000555573	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	7.08	□□□□□ -1.28
KTN1-223	ENST00000555573	FBLIM1	Q8WUP2	373 aa		7.08	□□□□□ -1.28
KTN1-223	ENST00000555573	PSMG3-AS1	Q96PY0	264 aa		7.08	□□□□□ -1.28
KTN1-223	ENST00000555573	SEMA6C	Q9H3T2	930 aa		7.08	□□□□□ -1.28
KTN1-223	ENST00000555573	CDK11A	Q9UQ88	783 aa	Predicted RBP	7.08	□□□□□ -1.28
KTN1-223	ENST00000555573	DAGLA	Q9Y4D2	1042 aa		7.08	□□□□□ -1.28
KTN1-223	ENST00000555573	CAP2	P40123	477 aa		7.07	□□□□□ -1.28
KTN1-223	ENST00000555573	DDR2	Q16832	855 aa		7.07	□□□□□ -1.28
KTN1-223	ENST00000555573	ALYREF	Q86V81	257 aa	Known RBP	7.07	□□□□□ -1.28
KTN1-223	ENST00000555573	TXNRD3	Q86VQ6	643 aa		7.07	□□□□□ -1.28
KTN1-223	ENST00000555573	DZIP1L	Q8IYY4	767 aa	Known RBP	7.07	□□□□□ -1.28
KTN1-223	ENST00000555573	PHACTR4	Q8IZ21	702 aa		7.07	□□□□□ -1.28
KTN1-223	ENST00000555573	KIF2C	Q99661	725 aa		7.07	□□□□□ -1.28
KTN1-223	ENST00000555573	LGR6	Q9HBX8	967 aa		7.07	□□□□□ -1.28
KTN1-223	ENST00000555573	PCOLCE2	Q9UKZ9	415 aa		7.07	□□□□□ -1.28
KTN1-223	ENST00000555573	LTBP3	Q9NS15	1303 aa		7.07	□□□□□ -1.28
KTN1-223	ENST00000555573	KRBA1	A5PL33	1030 aa		7.07	□□□□□ -1.28
KTN1-223	ENST00000555573	CCDC85C	A6NKD9	419 aa		7.07	□□□□□ -1.28
KTN1-223	ENST00000555573	CST3	P01034	146 aa	Predicted RBP	7.07	□□□□□ -1.28
KTN1-223	ENST00000555573	NFIC	P08651	508 aa		7.07	□□□□□ -1.28
KTN1-223	ENST00000555573	CHRNA4	P43681	627 aa		7.07	□□□□□ -1.28
KTN1-223	ENST00000555573	FXN	Q16595	210 aa		7.07	□□□□□ -1.28
KTN1-223	ENST00000555573	ARMCX6	Q7L4S7	300 aa		7.07	□□□□□ -1.28
KTN1-223	ENST00000555573	ARMC10	Q8N2F6	343 aa		7.07	□□□□□ -1.28
KTN1-223	ENST00000555573	XAGE3	Q8WTP9	111 aa		7.07	□□□□□ -1.28
KTN1-223	ENST00000555573	UTP4	Q969X6	686 aa	Known RBP	7.07	□□□□□ -1.28
KTN1-223	ENST00000555573		B2RBV5	119 aa		7.06	□□□□□ -1.28
KTN1-223	ENST00000555573	DYNC1LI2	O43237	492 aa	Predicted RBP	7.06	□□□□□ -1.28
KTN1-223	ENST00000555573	BMP3	P12645	472 aa		7.06	□□□□□ -1.28
KTN1-223	ENST00000555573	NFE2L2	Q16236	605 aa		7.06	□□□□□ -1.28
KTN1-223	ENST00000555573	UVSSA	Q2YD98	709 aa		7.06	□□□□□ -1.28
KTN1-223	ENST00000555573	NOP9	Q86U38	636 aa	Known RBP	7.06	□□□□□ -1.28
KTN1-223	ENST00000555573	MKL1	Q969V6	931 aa		7.06	□□□□□ -1.28
KTN1-223	ENST00000555573	MYRFL	Q96LU7	910 aa		7.06	□□□□□ -1.28
KTN1-223	ENST00000555573	SRPK1	Q96SB4	655 aa	Known RBP	7.06	□□□□□ -1.28
KTN1-223	ENST00000555573	FOXQ1	Q9C009	403 aa		7.06	□□□□□ -1.28
KTN1-223	ENST00000555573	SNTG2	Q9NY99	539 aa		7.06	□□□□□ -1.28
KTN1-223	ENST00000555573	MAPK8IP1	Q9UQF2	711 aa		7.06	□□□□□ -1.28
KTN1-223	ENST00000555573	FAM221B	A6H8Z2	402 aa		7.05	□□□□□ -1.28
KTN1-223	ENST00000555573	SMARCA5	O60264	1052 aa	Predicted RBP	7.05	□□□□□ -1.28
KTN1-223	ENST00000555573	LRIG2	O94898	1065 aa		7.05	□□□□□ -1.28
KTN1-223	ENST00000555573	UBOX5	O94941	541 aa		7.05	□□□□□ -1.28
KTN1-223	ENST00000555573	RASA3	Q14644	834 aa		7.05	□□□□□ -1.28
KTN1-223	ENST00000555573	C6orf15	Q6UXA7	325 aa	Predicted RBP	7.05	□□□□□ -1.28
KTN1-223	ENST00000555573	BAHD1	Q8TBE0	780 aa	Predicted RBP	7.05	□□□□□ -1.28
KTN1-223	ENST00000555573	CYB5D2	Q8WUJ1	264 aa		7.05	□□□□□ -1.28
KTN1-223	ENST00000555573	EZH1	Q92800	747 aa	Predicted RBP	7.05	□□□□□ -1.28

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