RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 HMGCS2P54868 508 aa13.31□□□□□ -0.28
TDP1-212ENST00000555565 MECOMQ03112 1051 aa13.31□□□□□ -0.28
TDP1-212ENST00000555565 GORABQ5T7V8 394 aa13.31□□□□□ -0.28
TDP1-212ENST00000555565 SLF2Q8IX21 1173 aa13.31□□□□□ -0.28
TDP1-212ENST00000555565 SPATA5Q8NB90 893 aa13.31□□□□□ -0.28
TDP1-212ENST00000555565 SSH3Q8TE77 659 aa13.31□□□□□ -0.28
TDP1-212ENST00000555565 CDX2Q99626 313 aaPredicted RBP13.31□□□□□ -0.28
TDP1-212ENST00000555565 MROH7-TTC4A0A0A0MT08 1334 aa13.31□□□□□ -0.28
TDP1-212ENST00000555565 LOC285556D6RIA3 1793 aa13.3□□□□□ -0.28
TDP1-212ENST00000555565 NPM3O75607 178 aaKnown RBP13.3□□□□□ -0.28
TDP1-212ENST00000555565 BTDP43251 543 aa13.3□□□□□ -0.28
TDP1-212ENST00000555565 ATP8B2P98198 1209 aa13.3□□□□□ -0.28
TDP1-212ENST00000555565 Q3C1V9 767 aa13.3□□□□□ -0.28
TDP1-212ENST00000555565 TBC1D9Q6ZT07 1266 aa13.3□□□□□ -0.28
TDP1-212ENST00000555565 ERICH6Q7L0X2 663 aa13.3□□□□□ -0.28
TDP1-212ENST00000555565 P2RX7Q99572 595 aaKnown RBP13.3□□□□□ -0.28
TDP1-212ENST00000555565 OSBPL5Q9H0X9 879 aaPredicted RBP13.3□□□□□ -0.28
TDP1-212ENST00000555565 C1orf115Q9H7X2 142 aa13.3□□□□□ -0.28
TDP1-212ENST00000555565 TTC28Q96AY4 2481 aa13.29□□□□□ -0.28
TDP1-212ENST00000555565 GPR75-ASB3A0A0A6YYF3 556 aa13.29□□□□□ -0.28
TDP1-212ENST00000555565 HOXA7P31268 230 aaPredicted RBP13.29□□□□□ -0.28
TDP1-212ENST00000555565 CAP2P40123 477 aa13.29□□□□□ -0.28
TDP1-212ENST00000555565 MCAMP43121 646 aa13.29□□□□□ -0.28
TDP1-212ENST00000555565 PICALMQ13492 652 aa13.29□□□□□ -0.28
TDP1-212ENST00000555565 CCL14Q16627 93 aa13.29□□□□□ -0.28
TDP1-212ENST00000555565 FTSJ3Q8IY81 847 aaKnown RBP13.29□□□□□ -0.28
TDP1-212ENST00000555565 NSUN4Q96CB9 384 aaKnown RBP13.29□□□□□ -0.28
TDP1-212ENST00000555565 NUDT12Q9BQG2 462 aa13.29□□□□□ -0.28
TDP1-212ENST00000555565 SEMA6BQ9H3T3 888 aa13.29□□□□□ -0.28
TDP1-212ENST00000555565 GPR108Q9NPR9 543 aa13.29□□□□□ -0.28
TDP1-212ENST00000555565 RBPJLQ9UBG7 517 aa13.29□□□□□ -0.28
TDP1-212ENST00000555565 ZBED9Q6R2W3 1325 aa13.29□□□□□ -0.28
TDP1-212ENST00000555565 JAG1P78504 1218 aa13.28□□□□□ -0.28
TDP1-212ENST00000555565 PABPC4Q13310 644 aaKnown RBP eCLIP13.28□□□□□ -0.28
TDP1-212ENST00000555565 TNNI3KQ59H18 835 aa13.28□□□□□ -0.28
TDP1-212ENST00000555565 MORN1Q5T089 497 aa13.28□□□□□ -0.28
TDP1-212ENST00000555565 ITPRIPQ8IWB1 547 aa13.28□□□□□ -0.28
TDP1-212ENST00000555565 TBC1D2Q9BYX2 928 aa13.28□□□□□ -0.28
TDP1-212ENST00000555565 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.28□□□□□ -0.28
TDP1-212ENST00000555565 FPGT-TNNI3KV9GXZ4 949 aa13.28□□□□□ -0.28
TDP1-212ENST00000555565 USP17L5A8MUK1 530 aa13.27□□□□□ -0.29
TDP1-212ENST00000555565 SURF6O75683 361 aaKnown RBP13.27□□□□□ -0.29
TDP1-212ENST00000555565 UQCRFS1P1P0C7P4 283 aa13.27□□□□□ -0.29
TDP1-212ENST00000555565 OS9Q13438 667 aaPredicted RBP13.27□□□□□ -0.29
TDP1-212ENST00000555565 ZNF697Q5TEC3 545 aa13.27□□□□□ -0.29
TDP1-212ENST00000555565 MAFAQ8NHW3 353 aaPredicted RBP13.27□□□□□ -0.29
TDP1-212ENST00000555565 DBNDD2Q9BQY9 259 aa13.27□□□□□ -0.29
TDP1-212ENST00000555565 PORCNQ9H237 461 aa13.27□□□□□ -0.29
TDP1-212ENST00000555565 TTYH1Q9H313 450 aaPredicted RBP13.27□□□□□ -0.29
TDP1-212ENST00000555565 SNRKQ9NRH2 765 aa13.27□□□□□ -0.29
TDP1-212ENST00000555565 RAI14Q9P0K7 980 aa13.27□□□□□ -0.29
TDP1-212ENST00000555565 NOP58Q9Y2X3 529 aaKnown RBP13.27□□□□□ -0.29
TDP1-212ENST00000555565 LDHCP07864 332 aa13.26□□□□□ -0.29
TDP1-212ENST00000555565 BACE1P56817 501 aa13.26□□□□□ -0.29
TDP1-212ENST00000555565 HERVK_113P62684 666 aa13.26□□□□□ -0.29
TDP1-212ENST00000555565 GSTO1P78417 241 aa13.26□□□□□ -0.29
TDP1-212ENST00000555565 SHHQ15465 462 aa13.26□□□□□ -0.29
TDP1-212ENST00000555565 TRMT44Q8IYL2 757 aaKnown RBP13.26□□□□□ -0.29
TDP1-212ENST00000555565 GPRC5AQ8NFJ5 357 aa13.26□□□□□ -0.29
TDP1-212ENST00000555565 SOCS4Q8WXH5 440 aa13.26□□□□□ -0.29
TDP1-212ENST00000555565 WDR18Q9BV38 432 aa13.26□□□□□ -0.29
TDP1-212ENST00000555565 SENP6Q9GZR1 1112 aaPredicted RBP13.26□□□□□ -0.29
TDP1-212ENST00000555565 LRP2BPQ9P2M1 347 aa13.26□□□□□ -0.29
TDP1-212ENST00000555565 MYO5AQ9Y4I1 1855 aaKnown RBP13.25□□□□□ -0.29
TDP1-212ENST00000555565 MAP4K4O95819 1239 aaPredicted RBP13.25□□□□□ -0.29
TDP1-212ENST00000555565 IGHA2P01877 340 aa13.25□□□□□ -0.29
TDP1-212ENST00000555565 ZKSCAN1P17029 563 aaPredicted RBP13.25□□□□□ -0.29
TDP1-212ENST00000555565 CCDC158Q5M9N0 1113 aa13.25□□□□□ -0.29
TDP1-212ENST00000555565 TTC39AQ5SRH9 613 aa13.25□□□□□ -0.29
TDP1-212ENST00000555565 C9orf50Q5SZB4 431 aa13.25□□□□□ -0.29
TDP1-212ENST00000555565 GPR142Q7Z601 462 aa13.25□□□□□ -0.29
TDP1-212ENST00000555565 FLRT1Q9NZU1 646 aa13.25□□□□□ -0.29
TDP1-212ENST00000555565 CYP2E1P05181 493 aaPredicted RBP13.24□□□□□ -0.29
TDP1-212ENST00000555565 MAPK4P31152 587 aa13.24□□□□□ -0.29
TDP1-212ENST00000555565 ERVK-9P63128 1117 aa13.24□□□□□ -0.29
TDP1-212ENST00000555565 ERVK-24P63145 666 aa13.24□□□□□ -0.29
TDP1-212ENST00000555565 MTMR2Q13614 643 aa13.24□□□□□ -0.29
TDP1-212ENST00000555565 SHROOM1Q2M3G4 852 aaPredicted RBP13.24□□□□□ -0.29
TDP1-212ENST00000555565 CEP85Q6P2H3 762 aa13.24□□□□□ -0.29
TDP1-212ENST00000555565 PANK1Q8TE04 598 aa13.24□□□□□ -0.29
TDP1-212ENST00000555565 MYLIPQ8WY64 445 aa13.24□□□□□ -0.29
TDP1-212ENST00000555565 ZNF512BQ96KM6 892 aaPredicted RBP13.24□□□□□ -0.29
TDP1-212ENST00000555565 LBHD1Q9BQE6 289 aaPredicted RBP13.24□□□□□ -0.29
TDP1-212ENST00000555565 TLR7Q9NYK1 1049 aaKnown RBP13.24□□□□□ -0.29
TDP1-212ENST00000555565 DBNLQ9UJU6 430 aaKnown RBP13.24□□□□□ -0.29
TDP1-212ENST00000555565 MAST2Q6P0Q8 1798 aa13.23□□□□□ -0.29
TDP1-212ENST00000555565 RGS2P41220 211 aa13.23□□□□□ -0.29
TDP1-212ENST00000555565 ZAP70P43403 619 aa13.23□□□□□ -0.29
TDP1-212ENST00000555565 ATN1P54259 1190 aaPredicted RBP13.23□□□□□ -0.29
TDP1-212ENST00000555565 IRX3P78415 501 aaPredicted RBP13.23□□□□□ -0.29
TDP1-212ENST00000555565 PLEKHH3Q7Z736 793 aa13.23□□□□□ -0.29
TDP1-212ENST00000555565 TEX11Q8IYF3 940 aa13.23□□□□□ -0.29
TDP1-212ENST00000555565 SH3RF3Q8TEJ3 882 aaPredicted RBP13.23□□□□□ -0.29
TDP1-212ENST00000555565 EAF2Q96CJ1 260 aaPredicted RBP13.23□□□□□ -0.29
TDP1-212ENST00000555565 APBA2Q99767 749 aa13.23□□□□□ -0.29
TDP1-212ENST00000555565 CCDC8Q9H0W5 538 aaPredicted RBP13.23□□□□□ -0.29
TDP1-212ENST00000555565 DNAJC18Q9H819 358 aa13.23□□□□□ -0.29
TDP1-212ENST00000555565 LTBP2Q14767 1821 aa13.23□□□□□ -0.29
TDP1-212ENST00000555565 CNMDO75829 334 aa13.22□□□□□ -0.29
TDP1-212ENST00000555565 COL9A1P20849 921 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms