RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 SASH1O94885 1247 aa6.98□□□□□ -1.29
SRP54-207ENST00000555535 TRIM37O94972 964 aa6.98□□□□□ -1.29
SRP54-207ENST00000555535 SLITRK5O94991 958 aa6.98□□□□□ -1.29
SRP54-207ENST00000555535 ADRB1P08588 477 aa6.98□□□□□ -1.29
SRP54-207ENST00000555535 KIR3DL1P43629 444 aa6.98□□□□□ -1.29
SRP54-207ENST00000555535 FGD1P98174 961 aa6.98□□□□□ -1.29
SRP54-207ENST00000555535 LILRA2Q8N149 483 aa6.98□□□□□ -1.29
SRP54-207ENST00000555535 MFSD2AQ8NA29 543 aa6.98□□□□□ -1.29
SRP54-207ENST00000555535 EGFL7Q9UHF1 273 aa6.98□□□□□ -1.29
SRP54-207ENST00000555535 EIF1AYO14602 144 aaKnown RBP6.97□□□□□ -1.29
SRP54-207ENST00000555535 CELA3BP08861 270 aa6.97□□□□□ -1.29
SRP54-207ENST00000555535 CYP7A1P22680 504 aa6.97□□□□□ -1.29
SRP54-207ENST00000555535 FCGRTP55899 365 aa6.97□□□□□ -1.29
SRP54-207ENST00000555535 CBX8Q9HC52 389 aa6.97□□□□□ -1.29
SRP54-207ENST00000555535 DNAJC25-GNG10A0A024R161 153 aa6.96□□□□□ -1.3
SRP54-207ENST00000555535 TEX51A0A1B0GUA7 166 aa6.96□□□□□ -1.3
SRP54-207ENST00000555535 HK2P52789 917 aa6.96□□□□□ -1.3
SRP54-207ENST00000555535 STK35Q8TDR2 534 aa6.96□□□□□ -1.3
SRP54-207ENST00000555535 CCDC97Q96F63 343 aaPredicted RBP6.96□□□□□ -1.3
SRP54-207ENST00000555535 FAM129BQ96TA1 746 aa6.96□□□□□ -1.3
SRP54-207ENST00000555535 MCOLN1Q9GZU1 580 aa6.96□□□□□ -1.3
SRP54-207ENST00000555535 ZSWIM5Q9P217 1185 aa6.96□□□□□ -1.3
SRP54-207ENST00000555535 CSADQ9Y600 493 aa6.96□□□□□ -1.3
SRP54-207ENST00000555535 DCDC2CA8MYV0 355 aa6.95□□□□□ -1.3
SRP54-207ENST00000555535 CAP2P40123 477 aa6.95□□□□□ -1.3
SRP54-207ENST00000555535 TMEM132EQ6IEE7 984 aa6.95□□□□□ -1.3
SRP54-207ENST00000555535 UBE3DQ7Z6J8 389 aa6.95□□□□□ -1.3
SRP54-207ENST00000555535 GGNQ86UU5 652 aa6.95□□□□□ -1.3
SRP54-207ENST00000555535 C12orf40Q86WS4 652 aa6.95□□□□□ -1.3
SRP54-207ENST00000555535 OXR1Q8N573 874 aa6.95□□□□□ -1.3
SRP54-207ENST00000555535 RNF32Q9H0A6 362 aa6.95□□□□□ -1.3
SRP54-207ENST00000555535 TMPRSS5Q9H3S3 457 aa6.95□□□□□ -1.3
SRP54-207ENST00000555535 CWC22Q9HCG8 908 aaKnown RBP6.95□□□□□ -1.3
SRP54-207ENST00000555535 SERPINA10Q9UK55 444 aa6.95□□□□□ -1.3
SRP54-207ENST00000555535 KCTD3Q9Y597 815 aa6.95□□□□□ -1.3
SRP54-207ENST00000555535 ZNF211Q13398 564 aaPredicted RBP6.94□□□□□ -1.3
SRP54-207ENST00000555535 SKOR2Q2VWA4 1001 aaPredicted RBP6.94□□□□□ -1.3
SRP54-207ENST00000555535 RALGPS1Q5JS13 557 aa6.94□□□□□ -1.3
SRP54-207ENST00000555535 PDZD8Q8NEN9 1154 aa6.94□□□□□ -1.3
SRP54-207ENST00000555535 PIWIL2Q8TC59 973 aaKnown RBP6.94□□□□□ -1.3
SRP54-207ENST00000555535 MIPEPQ99797 713 aa6.94□□□□□ -1.3
SRP54-207ENST00000555535 NLRP2Q9NX02 1062 aa6.94□□□□□ -1.3
SRP54-207ENST00000555535 ICMTO60725 284 aa6.93□□□□□ -1.3
SRP54-207ENST00000555535 TRIM13O60858 407 aa6.93□□□□□ -1.3
SRP54-207ENST00000555535 ERVFC1P60507 584 aa6.93□□□□□ -1.3
SRP54-207ENST00000555535 NFKB2Q00653 900 aa6.93□□□□□ -1.3
SRP54-207ENST00000555535 ZNF605Q86T29 641 aa6.93□□□□□ -1.3
SRP54-207ENST00000555535 ELMO3Q96BJ8 720 aa6.93□□□□□ -1.3
SRP54-207ENST00000555535 ANO2Q9NQ90 1003 aa6.93□□□□□ -1.3
SRP54-207ENST00000555535 FITM1A5D6W6 292 aa6.92□□□□□ -1.3
SRP54-207ENST00000555535 TMEM88BA6NKF7 163 aa6.92□□□□□ -1.3
SRP54-207ENST00000555535 LRRC14Q15048 493 aa6.92□□□□□ -1.3
SRP54-207ENST00000555535 XYLT2Q9H1B5 865 aa6.92□□□□□ -1.3
SRP54-207ENST00000555535 MYOCOSA0A1B0GUC4 107 aa6.91□□□□□ -1.3
SRP54-207ENST00000555535 CBX7O95931 251 aa6.91□□□□□ -1.3
SRP54-207ENST00000555535 ESR1P03372 595 aa6.91□□□□□ -1.3
SRP54-207ENST00000555535 KRTAP10-2P60368 255 aa6.91□□□□□ -1.3
SRP54-207ENST00000555535 NR0B2Q15466 257 aa6.91□□□□□ -1.3
SRP54-207ENST00000555535 LETMD1Q6P1Q0 360 aa6.91□□□□□ -1.3
SRP54-207ENST00000555535 DHX38Q92620 1227 aaKnown RBP6.91□□□□□ -1.3
SRP54-207ENST00000555535 SYTL4Q96C24 671 aaPredicted RBP6.91□□□□□ -1.3
SRP54-207ENST00000555535 CEP44Q9C0F1 390 aa6.91□□□□□ -1.3
SRP54-207ENST00000555535 ADAMTS10Q9H324 1103 aa6.91□□□□□ -1.3
SRP54-207ENST00000555535 ZNF552Q9H707 407 aaPredicted RBP6.91□□□□□ -1.3
SRP54-207ENST00000555535 PCDHA4Q9UN74 947 aa6.91□□□□□ -1.3
SRP54-207ENST00000555535 AKAP2Q9Y2D5 859 aa6.91□□□□□ -1.3
SRP54-207ENST00000555535 SNX17Q15036 470 aa6.9□□□□□ -1.3
SRP54-207ENST00000555535 LLGL2Q6P1M3 1020 aa6.9□□□□□ -1.3
SRP54-207ENST00000555535 GLYCTKQ8IVS8 523 aa6.9□□□□□ -1.3
SRP54-207ENST00000555535 EPS8L3Q8TE67 593 aaKnown RBP6.9□□□□□ -1.3
SRP54-207ENST00000555535 NECAB3Q96P71 396 aaPredicted RBP6.9□□□□□ -1.3
SRP54-207ENST00000555535 TRIT1Q9H3H1 467 aaKnown RBP6.9□□□□□ -1.3
SRP54-207ENST00000555535 PSPNO60542 156 aa6.89□□□□□ -1.31
SRP54-207ENST00000555535 SLBPQ14493 270 aaKnown RBP eCLIP6.89□□□□□ -1.31
SRP54-207ENST00000555535 ZXDCQ2QGD7 858 aaPredicted RBP6.89□□□□□ -1.31
SRP54-207ENST00000555535 SPATS1Q496A3 300 aa6.89□□□□□ -1.31
SRP54-207ENST00000555535 CREG2Q8IUH2 290 aa6.89□□□□□ -1.31
SRP54-207ENST00000555535 INTS4Q96HW7 963 aaKnown RBP6.89□□□□□ -1.31
SRP54-207ENST00000555535 YBX2Q9Y2T7 364 aaKnown RBP6.89□□□□□ -1.31
SRP54-207ENST00000555535 TNK2Q07912 1038 aa6.88□□□□□ -1.31
SRP54-207ENST00000555535 SPPL2CQ8IUH8 684 aa6.88□□□□□ -1.31
SRP54-207ENST00000555535 SP8Q8IXZ3 490 aa6.88□□□□□ -1.31
SRP54-207ENST00000555535 TMC1Q8TDI8 760 aa6.88□□□□□ -1.31
SRP54-207ENST00000555535 DMRTB1Q96MA1 342 aa6.88□□□□□ -1.31
SRP54-207ENST00000555535 BCO2Q9BYV7 579 aa6.88□□□□□ -1.31
SRP54-207ENST00000555535 NIF3L1Q9GZT8 377 aa6.88□□□□□ -1.31
SRP54-207ENST00000555535 GCM1Q9NP62 436 aa6.88□□□□□ -1.31
SRP54-207ENST00000555535 H3BRB1 525 aa6.87□□□□□ -1.31
SRP54-207ENST00000555535 BMP6P22004 513 aa6.87□□□□□ -1.31
SRP54-207ENST00000555535 TRHRP34981 398 aaPredicted RBP6.87□□□□□ -1.31
SRP54-207ENST00000555535 PDE6BP35913 854 aa6.87□□□□□ -1.31
SRP54-207ENST00000555535 PHLDB3Q6NSJ2 640 aa6.87□□□□□ -1.31
SRP54-207ENST00000555535 HDXQ7Z353 690 aa6.87□□□□□ -1.31
SRP54-207ENST00000555535 HID1Q8IV36 788 aa6.87□□□□□ -1.31
SRP54-207ENST00000555535 ALKBH8Q96BT7 664 aaKnown RBP6.87□□□□□ -1.31
SRP54-207ENST00000555535 SIGLEC10Q96LC7 697 aa6.87□□□□□ -1.31
SRP54-207ENST00000555535 TEPSINQ96N21 525 aa6.87□□□□□ -1.31
SRP54-207ENST00000555535 WNT10AQ9GZT5 417 aa6.87□□□□□ -1.31
SRP54-207ENST00000555535 TUT1Q9H6E5 874 aaKnown RBP6.87□□□□□ -1.31
SRP54-207ENST00000555535 SP110Q9HB58 689 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms