RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 OTUD5Q96G74 571 aa11.71□□□□□ -0.53
PSEN1-213ENST00000555386 DNAJC18Q9H819 358 aa11.71□□□□□ -0.53
PSEN1-213ENST00000555386 PICK1Q9NRD5 415 aa11.71□□□□□ -0.53
PSEN1-213ENST00000555386 CHMP5Q9NZZ3 219 aa11.71□□□□□ -0.53
PSEN1-213ENST00000555386 HERC5Q9UII4 1024 aaKnown RBP11.71□□□□□ -0.53
PSEN1-213ENST00000555386 DOCK1Q14185 1865 aa11.71□□□□□ -0.54
PSEN1-213ENST00000555386 COL2A1P02458 1487 aaPredicted RBP11.71□□□□□ -0.54
PSEN1-213ENST00000555386 PHF20L1A8MW92 1017 aa11.7□□□□□ -0.54
PSEN1-213ENST00000555386 FOXP2O15409 715 aa11.7□□□□□ -0.54
PSEN1-213ENST00000555386 CTDSPL2Q05D32 466 aa11.7□□□□□ -0.54
PSEN1-213ENST00000555386 MAP3K11Q16584 847 aa11.7□□□□□ -0.54
PSEN1-213ENST00000555386 C12orf60Q5U649 245 aa11.7□□□□□ -0.54
PSEN1-213ENST00000555386 RASAL3Q86YV0 1011 aa11.7□□□□□ -0.54
PSEN1-213ENST00000555386 OPTNQ96CV9 577 aa11.7□□□□□ -0.54
PSEN1-213ENST00000555386 ZIC5Q96T25 663 aa11.7□□□□□ -0.54
PSEN1-213ENST00000555386 SLKQ9H2G2 1235 aaPredicted RBP11.7□□□□□ -0.54
PSEN1-213ENST00000555386 ARPP21Q9UBL0 812 aaPredicted RBP11.7□□□□□ -0.54
PSEN1-213ENST00000555386 SNCAIPQ9Y6H5 919 aa11.7□□□□□ -0.54
PSEN1-213ENST00000555386 WDR33Q9C0J8 1336 aaKnown RBP11.7□□□□□ -0.54
PSEN1-213ENST00000555386 TBC1D12O60347 775 aa11.7□□□□□ -0.54
PSEN1-213ENST00000555386 PRDM1O75626 825 aa11.7□□□□□ -0.54
PSEN1-213ENST00000555386 FGAP02671 866 aa11.7□□□□□ -0.54
PSEN1-213ENST00000555386 ECE1P42892 770 aa11.7□□□□□ -0.54
PSEN1-213ENST00000555386 CERKLQ49MI3 558 aaPredicted RBP11.7□□□□□ -0.54
PSEN1-213ENST00000555386 TICAM2Q86XR7 235 aa11.7□□□□□ -0.54
PSEN1-213ENST00000555386 CCDC102AQ96A19 550 aa11.7□□□□□ -0.54
PSEN1-213ENST00000555386 WNK4Q96J92 1243 aa11.7□□□□□ -0.54
PSEN1-213ENST00000555386 MKNK2Q9HBH9 465 aa11.7□□□□□ -0.54
PSEN1-213ENST00000555386 INCENPQ9NQS7 918 aa11.7□□□□□ -0.54
PSEN1-213ENST00000555386 TOMM22Q9NS69 142 aa11.7□□□□□ -0.54
PSEN1-213ENST00000555386 ZNF112Q9UJU3 913 aa11.7□□□□□ -0.54
PSEN1-213ENST00000555386 CIZ1Q9ULV3 898 aaPredicted RBP11.7□□□□□ -0.54
PSEN1-213ENST00000555386 FAM155AB1AL88 458 aaPredicted RBP11.69□□□□□ -0.54
PSEN1-213ENST00000555386 GH2P01242 217 aa11.69□□□□□ -0.54
PSEN1-213ENST00000555386 SLC10A3P09131 477 aa11.69□□□□□ -0.54
PSEN1-213ENST00000555386 SHMT1P34896 483 aa11.69□□□□□ -0.54
PSEN1-213ENST00000555386 GJA5P36382 358 aa11.69□□□□□ -0.54
PSEN1-213ENST00000555386 CAP2P40123 477 aa11.69□□□□□ -0.54
PSEN1-213ENST00000555386 CDK8P49336 464 aa11.69□□□□□ -0.54
PSEN1-213ENST00000555386 JAG1P78504 1218 aa11.69□□□□□ -0.54
PSEN1-213ENST00000555386 PTH1RQ03431 593 aa11.69□□□□□ -0.54
PSEN1-213ENST00000555386 PPARAQ07869 468 aa11.69□□□□□ -0.54
PSEN1-213ENST00000555386 RAB3GAP1Q15042 981 aa11.69□□□□□ -0.54
PSEN1-213ENST00000555386 GIMAP6Q6P9H5 292 aa11.69□□□□□ -0.54
PSEN1-213ENST00000555386 KIAA1211Q6ZU35 1233 aa11.69□□□□□ -0.54
PSEN1-213ENST00000555386 SCYL3Q8IZE3 742 aa11.69□□□□□ -0.54
PSEN1-213ENST00000555386 DNAJC5GQ8N7S2 189 aa11.69□□□□□ -0.54
PSEN1-213ENST00000555386 ESYT1Q9BSJ8 1104 aa11.69□□□□□ -0.54
PSEN1-213ENST00000555386 EHD4Q9H223 541 aa11.69□□□□□ -0.54
PSEN1-213ENST00000555386 SSUH2Q9Y2M2 353 aa11.69□□□□□ -0.54
PSEN1-213ENST00000555386 ZHX2Q9Y6X8 837 aa11.69□□□□□ -0.54
PSEN1-213ENST00000555386 SGSM2O43147 1006 aa11.68□□□□□ -0.54
PSEN1-213ENST00000555386 CTNND1O60716 968 aaKnown RBP11.68□□□□□ -0.54
PSEN1-213ENST00000555386 KIF23Q02241 960 aaPredicted RBP11.68□□□□□ -0.54
PSEN1-213ENST00000555386 MAP3K10Q02779 954 aa11.68□□□□□ -0.54
PSEN1-213ENST00000555386 SBK1Q52WX2 424 aa11.68□□□□□ -0.54
PSEN1-213ENST00000555386 RRP12Q5JTH9 1297 aaKnown RBP11.68□□□□□ -0.54
PSEN1-213ENST00000555386 SPRYD7Q5W111 196 aa11.68□□□□□ -0.54
PSEN1-213ENST00000555386 HHIPL1Q96JK4 782 aa11.68□□□□□ -0.54
PSEN1-213ENST00000555386 KIF2CQ99661 725 aa11.68□□□□□ -0.54
PSEN1-213ENST00000555386 ANO2Q9NQ90 1003 aa11.68□□□□□ -0.54
PSEN1-213ENST00000555386 RAD50Q92878 1312 aa11.67□□□□□ -0.54
PSEN1-213ENST00000555386 TRIM75PA6NK02 468 aa11.67□□□□□ -0.54
PSEN1-213ENST00000555386 SLC3A2P08195 630 aaKnown RBP11.67□□□□□ -0.54
PSEN1-213ENST00000555386 AKR1B1P15121 316 aa11.67□□□□□ -0.54
PSEN1-213ENST00000555386 PTPRAP18433 802 aa11.67□□□□□ -0.54
PSEN1-213ENST00000555386 DDIT3P35638 169 aa11.67□□□□□ -0.54
PSEN1-213ENST00000555386 ATP2B2Q01814 1243 aa11.67□□□□□ -0.54
PSEN1-213ENST00000555386 GABPAQ06546 454 aa11.67□□□□□ -0.54
PSEN1-213ENST00000555386 ABCB5Q2M3G0 1257 aa11.67□□□□□ -0.54
PSEN1-213ENST00000555386 C16orf86Q6ZW13 317 aa11.67□□□□□ -0.54
PSEN1-213ENST00000555386 ERO1BQ86YB8 467 aa11.67□□□□□ -0.54
PSEN1-213ENST00000555386 CLEC10AQ8IUN9 316 aa11.67□□□□□ -0.54
PSEN1-213ENST00000555386 CABP5Q9NP86 173 aa11.67□□□□□ -0.54
PSEN1-213ENST00000555386 SWAP70Q9UH65 585 aa11.67□□□□□ -0.54
PSEN1-213ENST00000555386 ZBTB21Q9ULJ3 1066 aa11.67□□□□□ -0.54
PSEN1-213ENST00000555386 PHIPQ8WWQ0 1821 aa11.67□□□□□ -0.54
PSEN1-213ENST00000555386 SPDYE5A6NIY4 337 aa11.66□□□□□ -0.54
PSEN1-213ENST00000555386 ZNF213O14771 459 aa11.66□□□□□ -0.54
PSEN1-213ENST00000555386 IRF6O14896 467 aa11.66□□□□□ -0.54
PSEN1-213ENST00000555386 REC8O95072 547 aa11.66□□□□□ -0.54
PSEN1-213ENST00000555386 NOGQ13253 232 aa11.66□□□□□ -0.54
PSEN1-213ENST00000555386 RABEP1Q15276 862 aa11.66□□□□□ -0.54
PSEN1-213ENST00000555386 ZYXQ15942 572 aaKnown RBP11.66□□□□□ -0.54
PSEN1-213ENST00000555386 FAM47AQ5JRC9 791 aa11.66□□□□□ -0.54
PSEN1-213ENST00000555386 NOL9Q5SY16 702 aaKnown RBP11.66□□□□□ -0.54
PSEN1-213ENST00000555386 TATDN1Q6P1N9 297 aa11.66□□□□□ -0.54
PSEN1-213ENST00000555386 METTL16Q86W50 562 aaKnown RBP11.66□□□□□ -0.54
PSEN1-213ENST00000555386 ZNF444Q8N0Y2 327 aaPredicted RBP11.66□□□□□ -0.54
PSEN1-213ENST00000555386 DSCC1Q9BVC3 393 aa11.66□□□□□ -0.54
PSEN1-213ENST00000555386 RAD21O60216 631 aa11.65□□□□□ -0.54
PSEN1-213ENST00000555386 ASNSP08243 561 aa11.65□□□□□ -0.54
PSEN1-213ENST00000555386 PDE4BQ07343 736 aa11.65□□□□□ -0.54
PSEN1-213ENST00000555386 SPP2Q13103 211 aa11.65□□□□□ -0.54
PSEN1-213ENST00000555386 DGKZQ13574 1117 aa11.65□□□□□ -0.54
PSEN1-213ENST00000555386 SEPT2Q15019 361 aa11.65□□□□□ -0.54
PSEN1-213ENST00000555386 ALX1Q15699 326 aa11.65□□□□□ -0.54
PSEN1-213ENST00000555386 GADL1Q6ZQY3 521 aa11.65□□□□□ -0.54
PSEN1-213ENST00000555386 PLCD3Q8N3E9 789 aa11.65□□□□□ -0.54
PSEN1-213ENST00000555386 LAMA4Q16363 1823 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms