RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 DNAJC18Q9H819 358 aa15.27■□□□□ 0.04
RDH11-207ENST00000554731 HMX1Q9NP08 348 aaPredicted RBP15.27■□□□□ 0.04
RDH11-207ENST00000554731 PALD1Q9ULE6 856 aa15.27■□□□□ 0.04
RDH11-207ENST00000554731 A0A1W2PPC1 479 aa15.26■□□□□ 0.03
RDH11-207ENST00000554731 USP17L10C9JJH3 530 aa15.26■□□□□ 0.03
RDH11-207ENST00000554731 GDF11O95390 407 aa15.26■□□□□ 0.03
RDH11-207ENST00000554731 HLA-DOAP06340 250 aa15.26■□□□□ 0.03
RDH11-207ENST00000554731 ZAP70P43403 619 aa15.26■□□□□ 0.03
RDH11-207ENST00000554731 HERVK_113P62684 666 aa15.26■□□□□ 0.03
RDH11-207ENST00000554731 JAG1P78504 1218 aa15.26■□□□□ 0.03
RDH11-207ENST00000554731 GPRC5AQ8NFJ5 357 aa15.26■□□□□ 0.03
RDH11-207ENST00000554731 DIS3LQ8TF46 1054 aaKnown RBP15.26■□□□□ 0.03
RDH11-207ENST00000554731 PIH1D3Q9NQM4 214 aaKnown RBP15.26■□□□□ 0.03
RDH11-207ENST00000554731 SAP30BPQ9UHR5 308 aaKnown RBP15.26■□□□□ 0.03
RDH11-207ENST00000554731 ZBTB21Q9ULJ3 1066 aa15.26■□□□□ 0.03
RDH11-207ENST00000554731 MAST2Q6P0Q8 1798 aa15.26■□□□□ 0.03
RDH11-207ENST00000554731 RANBP2P49792 3224 aaKnown RBP15.26■□□□□ 0.03
RDH11-207ENST00000554731 SIPA1L1O43166 1804 aa15.25■□□□□ 0.03
RDH11-207ENST00000554731 CYP7A1P22680 504 aa15.25■□□□□ 0.03
RDH11-207ENST00000554731 TRIM32Q13049 653 aa15.25■□□□□ 0.03
RDH11-207ENST00000554731 FTSJ3Q8IY81 847 aaKnown RBP15.25■□□□□ 0.03
RDH11-207ENST00000554731 PIAS4Q8N2W9 510 aaPredicted RBP15.25■□□□□ 0.03
RDH11-207ENST00000554731 SOCS4Q8WXH5 440 aa15.25■□□□□ 0.03
RDH11-207ENST00000554731 NUDT12Q9BQG2 462 aa15.25■□□□□ 0.03
RDH11-207ENST00000554731 C1orf115Q9H7X2 142 aa15.25■□□□□ 0.03
RDH11-207ENST00000554731 DBNLQ9UJU6 430 aaKnown RBP15.25■□□□□ 0.03
RDH11-207ENST00000554731 NOP58Q9Y2X3 529 aaKnown RBP15.25■□□□□ 0.03
RDH11-207ENST00000554731 IDH1O75874 414 aaKnown RBP15.24■□□□□ 0.03
RDH11-207ENST00000554731 CYP2B6P20813 491 aa15.24■□□□□ 0.03
RDH11-207ENST00000554731 MAPK4P31152 587 aa15.24■□□□□ 0.03
RDH11-207ENST00000554731 DYNLL1P63167 89 aaKnown RBP15.24■□□□□ 0.03
RDH11-207ENST00000554731 PDE3AQ14432 1141 aa15.24■□□□□ 0.03
RDH11-207ENST00000554731 SHROOM1Q2M3G4 852 aaPredicted RBP15.24■□□□□ 0.03
RDH11-207ENST00000554731 CERS3Q8IU89 383 aa15.24■□□□□ 0.03
RDH11-207ENST00000554731 ITPRIPQ8IWB1 547 aa15.24■□□□□ 0.03
RDH11-207ENST00000554731 CCAR1Q8IX12 1150 aaKnown RBP15.24■□□□□ 0.03
RDH11-207ENST00000554731 GTF3C2Q8WUA4 911 aaPredicted RBP15.24■□□□□ 0.03
RDH11-207ENST00000554731 TRIB2Q92519 343 aa15.24■□□□□ 0.03
RDH11-207ENST00000554731 NBPF3Q9H094 633 aa15.24■□□□□ 0.03
RDH11-207ENST00000554731 TXNRD2Q9NNW7 524 aa15.24■□□□□ 0.03
RDH11-207ENST00000554731 PEX10O60683 326 aa15.23■□□□□ 0.03
RDH11-207ENST00000554731 XRCC5P13010 732 aaKnown RBP15.23■□□□□ 0.03
RDH11-207ENST00000554731 USP17L2Q6R6M4 530 aa15.23■□□□□ 0.03
RDH11-207ENST00000554731 TRMT44Q8IYL2 757 aaKnown RBP15.23■□□□□ 0.03
RDH11-207ENST00000554731 CCDC8Q9H0W5 538 aaPredicted RBP15.23■□□□□ 0.03
RDH11-207ENST00000554731 TLR7Q9NYK1 1049 aaKnown RBP15.23■□□□□ 0.03
RDH11-207ENST00000554731 RBPJLQ9UBG7 517 aa15.23■□□□□ 0.03
RDH11-207ENST00000554731 STAP2Q9UGK3 403 aa15.23■□□□□ 0.03
RDH11-207ENST00000554731 GH2P01242 217 aa15.22■□□□□ 0.03
RDH11-207ENST00000554731 PRKAR2AP13861 404 aaKnown RBP15.22■□□□□ 0.03
RDH11-207ENST00000554731 USP5P45974 858 aa15.22■□□□□ 0.03
RDH11-207ENST00000554731 ERVK-9P63128 1117 aa15.22■□□□□ 0.03
RDH11-207ENST00000554731 ERVK-24P63145 666 aa15.22■□□□□ 0.03
RDH11-207ENST00000554731 MAP3K21Q5TCX8 1036 aa15.22■□□□□ 0.03
RDH11-207ENST00000554731 C7orf61Q8IZ16 206 aa15.22■□□□□ 0.03
RDH11-207ENST00000554731 MIGA1Q8NAN2 632 aa15.22■□□□□ 0.03
RDH11-207ENST00000554731 EAF2Q96CJ1 260 aaPredicted RBP15.22■□□□□ 0.03
RDH11-207ENST00000554731 PAGR1Q9BTK6 254 aa15.22■□□□□ 0.03
RDH11-207ENST00000554731 EMILIN3Q9NT22 766 aa15.22■□□□□ 0.03
RDH11-207ENST00000554731 OGDHLQ9ULD0 1010 aa15.22■□□□□ 0.03
RDH11-207ENST00000554731 CDK5RAP2Q96SN8 1893 aa15.21■□□□□ 0.03
RDH11-207ENST00000554731 ZKSCAN1P17029 563 aaPredicted RBP15.21■□□□□ 0.03
RDH11-207ENST00000554731 MAGEB6Q8N7X4 407 aa15.21■□□□□ 0.03
RDH11-207ENST00000554731 FEZ1Q99689 392 aa15.21■□□□□ 0.03
RDH11-207ENST00000554731 C11orf49Q9H6J7 331 aa15.21■□□□□ 0.03
RDH11-207ENST00000554731 SERPINB13Q9UIV8 391 aa15.21■□□□□ 0.03
RDH11-207ENST00000554731 FOCADQ5VW36 1801 aa15.21■□□□□ 0.03
RDH11-207ENST00000554731 MYO5AQ9Y4I1 1855 aaKnown RBP15.2■□□□□ 0.02
RDH11-207ENST00000554731 SZT2Q5T011 3432 aa15.2■□□□□ 0.02
RDH11-207ENST00000554731 RLBP1P12271 317 aa15.2■□□□□ 0.02
RDH11-207ENST00000554731 RGS2P41220 211 aa15.2■□□□□ 0.02
RDH11-207ENST00000554731 MNX1P50219 401 aaPredicted RBP15.2■□□□□ 0.02
RDH11-207ENST00000554731 MAP3K12Q12852 859 aa15.2■□□□□ 0.02
RDH11-207ENST00000554731 Q3C1V9 767 aa15.2■□□□□ 0.02
RDH11-207ENST00000554731 TATDN1Q6P1N9 297 aa15.2■□□□□ 0.02
RDH11-207ENST00000554731 TMED8Q6PL24 325 aaPredicted RBP15.2■□□□□ 0.02
RDH11-207ENST00000554731 GPR142Q7Z601 462 aa15.2■□□□□ 0.02
RDH11-207ENST00000554731 PLEKHH3Q7Z736 793 aa15.2■□□□□ 0.02
RDH11-207ENST00000554731 USP6NLQ92738 828 aa15.2■□□□□ 0.02
RDH11-207ENST00000554731 C12orf42Q96LP6 360 aa15.2■□□□□ 0.02
RDH11-207ENST00000554731 EHD4Q9H223 541 aa15.2■□□□□ 0.02
RDH11-207ENST00000554731 PORCNQ9H237 461 aa15.2■□□□□ 0.02
RDH11-207ENST00000554731 CWC22Q9HCG8 908 aaKnown RBP15.2■□□□□ 0.02
RDH11-207ENST00000554731 ZMYND8Q9ULU4 1186 aaPredicted RBP15.2■□□□□ 0.02
RDH11-207ENST00000554731 PLXNB2O15031 1838 aa15.2■□□□□ 0.02
RDH11-207ENST00000554731 ALPK3Q96L96 1907 aa15.19■□□□□ 0.02
RDH11-207ENST00000554731 USP17L15C9J2P7 530 aa15.19■□□□□ 0.02
RDH11-207ENST00000554731 USP17L13C9JLJ4 530 aa15.19■□□□□ 0.02
RDH11-207ENST00000554731 USP17L11C9JVI0 530 aa15.19■□□□□ 0.02
RDH11-207ENST00000554731 USP17L18D6R9N7 530 aa15.19■□□□□ 0.02
RDH11-207ENST00000554731 USP17L22D6RA61 530 aa15.19■□□□□ 0.02
RDH11-207ENST00000554731 USP17L17D6RBQ6 530 aa15.19■□□□□ 0.02
RDH11-207ENST00000554731 USP17L19D6RCP7 530 aa15.19■□□□□ 0.02
RDH11-207ENST00000554731 USP17L20D6RJB6 530 aa15.19■□□□□ 0.02
RDH11-207ENST00000554731 BMP8BP34820 402 aa15.19■□□□□ 0.02
RDH11-207ENST00000554731 USP14P54578 494 aa15.19■□□□□ 0.02
RDH11-207ENST00000554731 CCNA1P78396 465 aa15.19■□□□□ 0.02
RDH11-207ENST00000554731 CACNB2Q08289 660 aaPredicted RBP15.19■□□□□ 0.02
RDH11-207ENST00000554731 USP17L24Q0WX57 530 aa15.19■□□□□ 0.02
RDH11-207ENST00000554731 RAB3GAP1Q15042 981 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms