RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 XAGE2Q96GT9 111 aa17.14■□□□□ 0.33
NEDD1-206ENST00000554226 P2RX7Q99572 595 aaKnown RBP17.14■□□□□ 0.33
NEDD1-206ENST00000554226 PRDM6Q9NQX0 595 aa17.14■□□□□ 0.33
NEDD1-206ENST00000554226 PI4KBQ9UBF8 816 aa17.14■□□□□ 0.33
NEDD1-206ENST00000554226 RBPJLQ9UBG7 517 aa17.14■□□□□ 0.33
NEDD1-206ENST00000554226 PA2G4Q9UQ80 394 aaKnown RBP17.14■□□□□ 0.33
NEDD1-206ENST00000554226 AKAP2Q9Y2D5 859 aa17.14■□□□□ 0.33
NEDD1-206ENST00000554226 TTC28Q96AY4 2481 aa17.14■□□□□ 0.33
NEDD1-206ENST00000554226 E9PSI1 815 aa17.13■□□□□ 0.33
NEDD1-206ENST00000554226 PDE3AQ14432 1141 aa17.13■□□□□ 0.33
NEDD1-206ENST00000554226 ZNF697Q5TEC3 545 aa17.13■□□□□ 0.33
NEDD1-206ENST00000554226 APBA2Q99767 749 aa17.13■□□□□ 0.33
NEDD1-206ENST00000554226 HMG20BQ9P0W2 317 aa17.13■□□□□ 0.33
NEDD1-206ENST00000554226 RGS2P41220 211 aa17.12■□□□□ 0.33
NEDD1-206ENST00000554226 ERVK-9P63128 1117 aa17.12■□□□□ 0.33
NEDD1-206ENST00000554226 ERVK-24P63145 666 aa17.12■□□□□ 0.33
NEDD1-206ENST00000554226 MTX1Q13505 466 aa17.12■□□□□ 0.33
NEDD1-206ENST00000554226 SPATA5Q8NB90 893 aa17.12■□□□□ 0.33
NEDD1-206ENST00000554226 TMOD4Q9NZQ9 345 aa17.12■□□□□ 0.33
NEDD1-206ENST00000554226 RLFQ13129 1914 aa17.11■□□□□ 0.33
NEDD1-206ENST00000554226 PRUNE2Q8WUY3 3088 aa17.11■□□□□ 0.33
NEDD1-206ENST00000554226 ARID4AP29374 1257 aaPredicted RBP17.11■□□□□ 0.33
NEDD1-206ENST00000554226 CCND3P30281 292 aaPredicted RBP17.11■□□□□ 0.33
NEDD1-206ENST00000554226 POTEEQ6S8J3 1075 aa17.11■□□□□ 0.33
NEDD1-206ENST00000554226 GPR142Q7Z601 462 aa17.11■□□□□ 0.33
NEDD1-206ENST00000554226 PORCNQ9H237 461 aa17.11■□□□□ 0.33
NEDD1-206ENST00000554226 DNAJC18Q9H819 358 aa17.11■□□□□ 0.33
NEDD1-206ENST00000554226 USP17L10C9JJH3 530 aa17.1■□□□□ 0.33
NEDD1-206ENST00000554226 ANP32CO43423 234 aa17.1■□□□□ 0.33
NEDD1-206ENST00000554226 PEX10O60683 326 aa17.1■□□□□ 0.33
NEDD1-206ENST00000554226 IGSF3O75054 1194 aa17.1■□□□□ 0.33
NEDD1-206ENST00000554226 JAG1P78504 1218 aa17.1■□□□□ 0.33
NEDD1-206ENST00000554226 Q3C1V9 767 aa17.1■□□□□ 0.33
NEDD1-206ENST00000554226 PLEKHH3Q7Z736 793 aa17.1■□□□□ 0.33
NEDD1-206ENST00000554226 FOXP4Q8IVH2 680 aaPredicted RBP17.1■□□□□ 0.33
NEDD1-206ENST00000554226 TEX11Q8IYF3 940 aa17.1■□□□□ 0.33
NEDD1-206ENST00000554226 MAFAQ8NHW3 353 aaPredicted RBP17.1■□□□□ 0.33
NEDD1-206ENST00000554226 CDX2Q99626 313 aaPredicted RBP17.1■□□□□ 0.33
NEDD1-206ENST00000554226 LBHD1Q9BQE6 289 aaPredicted RBP17.1■□□□□ 0.33
NEDD1-206ENST00000554226 ZNF236Q9UL36 1845 aa17.1■□□□□ 0.33
NEDD1-206ENST00000554226 CDH23Q9H251 3354 aa17.09■□□□□ 0.33
NEDD1-206ENST00000554226 MSCO60682 206 aa17.09■□□□□ 0.33
NEDD1-206ENST00000554226 IGHA2P01877 340 aa17.09■□□□□ 0.33
NEDD1-206ENST00000554226 HOXC6P09630 235 aa17.09■□□□□ 0.33
NEDD1-206ENST00000554226 PPP4CP60510 307 aa17.09■□□□□ 0.33
NEDD1-206ENST00000554226 TFCP2Q12800 502 aa17.09■□□□□ 0.33
NEDD1-206ENST00000554226 CCL14Q16627 93 aa17.09■□□□□ 0.33
NEDD1-206ENST00000554226 PI16Q6UXB8 463 aa17.09■□□□□ 0.33
NEDD1-206ENST00000554226 PLCG2P16885 1265 aa17.08■□□□□ 0.32
NEDD1-206ENST00000554226 SLFN5Q08AF3 891 aa17.08■□□□□ 0.32
NEDD1-206ENST00000554226 MAP2K5Q13163 448 aa17.08■□□□□ 0.32
NEDD1-206ENST00000554226 TBC1D9Q6ZT07 1266 aa17.08■□□□□ 0.32
NEDD1-206ENST00000554226 SH3RF3Q8TEJ3 882 aaPredicted RBP17.08■□□□□ 0.32
NEDD1-206ENST00000554226 C12orf42Q96LP6 360 aa17.08■□□□□ 0.32
NEDD1-206ENST00000554226 SMC4Q9NTJ3 1288 aa17.08■□□□□ 0.32
NEDD1-206ENST00000554226 ZBTB21Q9ULJ3 1066 aa17.08■□□□□ 0.32
NEDD1-206ENST00000554226 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.08■□□□□ 0.32
NEDD1-206ENST00000554226 DNM1LO00429 736 aa17.07■□□□□ 0.32
NEDD1-206ENST00000554226 CT47B1P0C2W7 299 aaPredicted RBP17.07■□□□□ 0.32
NEDD1-206ENST00000554226 LBX2Q6XYB7 198 aa17.07■□□□□ 0.32
NEDD1-206ENST00000554226 FAM9BQ8IZU0 186 aa17.07■□□□□ 0.32
NEDD1-206ENST00000554226 LPAR1Q92633 364 aa17.07■□□□□ 0.32
NEDD1-206ENST00000554226 MEIS3Q99687 375 aa17.07■□□□□ 0.32
NEDD1-206ENST00000554226 API5Q9BZZ5 524 aaKnown RBP17.07■□□□□ 0.32
NEDD1-206ENST00000554226 SENP6Q9GZR1 1112 aaPredicted RBP17.07■□□□□ 0.32
NEDD1-206ENST00000554226 EMILIN3Q9NT22 766 aa17.07■□□□□ 0.32
NEDD1-206ENST00000554226 RAI14Q9P0K7 980 aa17.07■□□□□ 0.32
NEDD1-206ENST00000554226 RABGAP1Q9Y3P9 1069 aa17.07■□□□□ 0.32
NEDD1-206ENST00000554226 FLT1P17948 1338 aa17.06■□□□□ 0.32
NEDD1-206ENST00000554226 GLRX3O76003 335 aaKnown RBP17.06■□□□□ 0.32
NEDD1-206ENST00000554226 BAG3O95817 575 aa17.06■□□□□ 0.32
NEDD1-206ENST00000554226 MCAMP43121 646 aa17.06■□□□□ 0.32
NEDD1-206ENST00000554226 CCAR1Q8IX12 1150 aaKnown RBP17.06■□□□□ 0.32
NEDD1-206ENST00000554226 EDC3Q96F86 508 aaKnown RBP17.06■□□□□ 0.32
NEDD1-206ENST00000554226 SEMA6BQ9H3T3 888 aa17.06■□□□□ 0.32
NEDD1-206ENST00000554226 DDX20Q9UHI6 824 aaKnown RBP17.06■□□□□ 0.32
NEDD1-206ENST00000554226 SLC15A5A6NIM6 579 aa17.05■□□□□ 0.32
NEDD1-206ENST00000554226 SRGAP3O43295 1099 aa17.05■□□□□ 0.32
NEDD1-206ENST00000554226 CNMDO75829 334 aa17.05■□□□□ 0.32
NEDD1-206ENST00000554226 UQCRFS1P1P0C7P4 283 aa17.05■□□□□ 0.32
NEDD1-206ENST00000554226 CCNA1P78396 465 aa17.05■□□□□ 0.32
NEDD1-206ENST00000554226 MFSD14CQ5VZR4 134 aa17.05■□□□□ 0.32
NEDD1-206ENST00000554226 USP17L2Q6R6M4 530 aa17.05■□□□□ 0.32
NEDD1-206ENST00000554226 TRMT2AQ8IZ69 625 aaKnown RBP17.05■□□□□ 0.32
NEDD1-206ENST00000554226 NOL10Q9BSC4 688 aaKnown RBP17.05■□□□□ 0.32
NEDD1-206ENST00000554226 MYH1P12882 1939 aa17.05■□□□□ 0.32
NEDD1-206ENST00000554226 MYO5AQ9Y4I1 1855 aaKnown RBP17.05■□□□□ 0.32
NEDD1-206ENST00000554226 MUC3AQ02505 3323 aa17.04■□□□□ 0.32
NEDD1-206ENST00000554226 SHROOM1Q2M3G4 852 aaPredicted RBP17.04■□□□□ 0.32
NEDD1-206ENST00000554226 MYLIPQ8WY64 445 aa17.04■□□□□ 0.32
NEDD1-206ENST00000554226 SYMPKQ92797 1274 aaKnown RBP17.04■□□□□ 0.32
NEDD1-206ENST00000554226 NEUROD6Q96NK8 337 aa17.04■□□□□ 0.32
NEDD1-206ENST00000554226 PAGR1Q9BTK6 254 aa17.04■□□□□ 0.32
NEDD1-206ENST00000554226 FLRT1Q9NZU1 646 aa17.04■□□□□ 0.32
NEDD1-206ENST00000554226 LRP2BPQ9P2M1 347 aa17.04■□□□□ 0.32
NEDD1-206ENST00000554226 PRKAG2Q9UGJ0 569 aa17.04■□□□□ 0.32
NEDD1-206ENST00000554226 GNAI3P08754 354 aa17.03■□□□□ 0.32
NEDD1-206ENST00000554226 PTPREP23469 700 aa17.03■□□□□ 0.32
NEDD1-206ENST00000554226 ATN1P54259 1190 aaPredicted RBP17.03■□□□□ 0.32
NEDD1-206ENST00000554226 RTP1P59025 263 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms