RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 USP17L3A6NCW0 530 aa8.98□□□□□ -0.97
ATXN3-224ENST00000554040 USP17L4A6NCW7 530 aa8.98□□□□□ -0.97
ATXN3-224ENST00000554040 IGF2BP3O00425 579 aaKnown RBP eCLIP8.98□□□□□ -0.97
ATXN3-224ENST00000554040 WNT10BO00744 389 aa8.98□□□□□ -0.97
ATXN3-224ENST00000554040 POU4F2Q12837 409 aa8.98□□□□□ -0.97
ATXN3-224ENST00000554040 LYPD4Q6UWN0 246 aa8.98□□□□□ -0.97
ATXN3-224ENST00000554040 USP17L1Q7RTZ2 530 aa8.98□□□□□ -0.97
ATXN3-224ENST00000554040 PODNQ7Z5L7 613 aa8.98□□□□□ -0.97
ATXN3-224ENST00000554040 NBPF11Q86T75 865 aa8.98□□□□□ -0.97
ATXN3-224ENST00000554040 TRIM22Q8IYM9 498 aa8.98□□□□□ -0.97
ATXN3-224ENST00000554040 CCDC85AQ96PX6 553 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-224ENST00000554040 ANKIB1Q9P2G1 1089 aa8.98□□□□□ -0.97
ATXN3-224ENST00000554040 ANGEL1Q9UNK9 670 aaKnown RBP8.98□□□□□ -0.97
ATXN3-224ENST00000554040 ZBTB48P10074 688 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-224ENST00000554040 CAP1Q01518 475 aa8.97□□□□□ -0.97
ATXN3-224ENST00000554040 SP3Q02447 781 aa8.97□□□□□ -0.97
ATXN3-224ENST00000554040 SRSF11Q05519 484 aaKnown RBP8.97□□□□□ -0.97
ATXN3-224ENST00000554040 SLC4A8Q2Y0W8 1093 aa8.97□□□□□ -0.97
ATXN3-224ENST00000554040 OTUD7BQ6GQQ9 843 aa8.97□□□□□ -0.97
ATXN3-224ENST00000554040 CYP2U1Q7Z449 544 aa8.97□□□□□ -0.97
ATXN3-224ENST00000554040 OGFOD1Q8N543 542 aa8.97□□□□□ -0.97
ATXN3-224ENST00000554040 ZNF428Q96B54 188 aa8.97□□□□□ -0.97
ATXN3-224ENST00000554040 ARHGEF10LQ9HCE6 1279 aa8.97□□□□□ -0.97
ATXN3-224ENST00000554040 DYRK1BQ9Y463 629 aa8.97□□□□□ -0.97
ATXN3-224ENST00000554040 UNCXA6NJT0 531 aa8.96□□□□□ -0.98
ATXN3-224ENST00000554040 SPATA31C2B4DYI2 1134 aa8.96□□□□□ -0.98
ATXN3-224ENST00000554040 NEFMP07197 916 aa8.96□□□□□ -0.98
ATXN3-224ENST00000554040 MMP14P50281 582 aa8.96□□□□□ -0.98
ATXN3-224ENST00000554040 CRHR2Q13324 411 aa8.96□□□□□ -0.98
ATXN3-224ENST00000554040 MAP3K11Q16584 847 aa8.96□□□□□ -0.98
ATXN3-224ENST00000554040 KCTD17Q8N5Z5 321 aa8.96□□□□□ -0.98
ATXN3-224ENST00000554040 ISCA1Q9BUE6 129 aa8.96□□□□□ -0.98
ATXN3-224ENST00000554040 CEP126Q9P2H0 1117 aa8.96□□□□□ -0.98
ATXN3-224ENST00000554040 TSPYL4Q9UJ04 414 aa8.96□□□□□ -0.98
ATXN3-224ENST00000554040 ANKRD36CQ5JPF3 1778 aa8.95□□□□□ -0.98
ATXN3-224ENST00000554040 IRS4O14654 1257 aaPredicted RBP8.95□□□□□ -0.98
ATXN3-224ENST00000554040 IRF5Q13568 498 aa8.95□□□□□ -0.98
ATXN3-224ENST00000554040 ARHGEF6Q15052 776 aa8.95□□□□□ -0.98
ATXN3-224ENST00000554040 NFE2L2Q16236 605 aa8.95□□□□□ -0.98
ATXN3-224ENST00000554040 SLC9C1Q4G0N8 1177 aa8.95□□□□□ -0.98
ATXN3-224ENST00000554040 DACT2Q5SW24 774 aa8.95□□□□□ -0.98
ATXN3-224ENST00000554040 APOBEC3FQ8IUX4 373 aaKnown RBP8.95□□□□□ -0.98
ATXN3-224ENST00000554040 DPF3Q92784 378 aa8.95□□□□□ -0.98
ATXN3-224ENST00000554040 WNK4Q96J92 1243 aa8.95□□□□□ -0.98
ATXN3-224ENST00000554040 MXD3Q9BW11 206 aa8.95□□□□□ -0.98
ATXN3-224ENST00000554040 PRO3102Q9H379 93 aa8.95□□□□□ -0.98
ATXN3-224ENST00000554040 SEC31BQ9NQW1 1179 aa8.95□□□□□ -0.98
ATXN3-224ENST00000554040 RAB6BQ9NRW1 208 aa8.95□□□□□ -0.98
ATXN3-224ENST00000554040 FZD1Q9UP38 647 aa8.95□□□□□ -0.98
ATXN3-224ENST00000554040 HRH3Q9Y5N1 445 aa8.95□□□□□ -0.98
ATXN3-224ENST00000554040 CLSPNQ9HAW4 1339 aa8.95□□□□□ -0.98
ATXN3-224ENST00000554040 SCN9AQ15858 1988 aa8.95□□□□□ -0.98
ATXN3-224ENST00000554040 TAF1P21675 1872 aa8.94□□□□□ -0.98
ATXN3-224ENST00000554040 WTIPA6NIX2 430 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-224ENST00000554040 PPP1R12BO60237 982 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-224ENST00000554040 IL2RAP01589 272 aa8.94□□□□□ -0.98
ATXN3-224ENST00000554040 THBS1P07996 1170 aa8.94□□□□□ -0.98
ATXN3-224ENST00000554040 ATP2B4P23634 1241 aa8.94□□□□□ -0.98
ATXN3-224ENST00000554040 PPP2R1AP30153 589 aa8.94□□□□□ -0.98
ATXN3-224ENST00000554040 TRIM28Q13263 835 aaKnown RBP8.94□□□□□ -0.98
ATXN3-224ENST00000554040 TSGA10IPQ3SY00 556 aa8.94□□□□□ -0.98
ATXN3-224ENST00000554040 STRIP1Q5VSL9 837 aa8.94□□□□□ -0.98
ATXN3-224ENST00000554040 PLBD2Q8NHP8 589 aa8.94□□□□□ -0.98
ATXN3-224ENST00000554040 GMCL1Q96IK5 515 aa8.94□□□□□ -0.98
ATXN3-224ENST00000554040 CLMNQ96JQ2 1002 aa8.94□□□□□ -0.98
ATXN3-224ENST00000554040 PLEKHF1Q96S99 279 aa8.94□□□□□ -0.98
ATXN3-224ENST00000554040 PTPN18Q99952 460 aa8.94□□□□□ -0.98
ATXN3-224ENST00000554040 DEFB129Q9H1M3 183 aa8.94□□□□□ -0.98
ATXN3-224ENST00000554040 BABAM1Q9NWV8 329 aa8.94□□□□□ -0.98
ATXN3-224ENST00000554040 PTCH2Q9Y6C5 1203 aa8.94□□□□□ -0.98
ATXN3-224ENST00000554040 LAMB4A4D0S4 1761 aa8.94□□□□□ -0.98
ATXN3-224ENST00000554040 SASH1O94885 1247 aa8.93□□□□□ -0.98
ATXN3-224ENST00000554040 GDF11O95390 407 aa8.93□□□□□ -0.98
ATXN3-224ENST00000554040 CELA2BP08218 269 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-224ENST00000554040 PRKCSHP14314 528 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-224ENST00000554040 RIPOR1Q6ZS17 1223 aa8.93□□□□□ -0.98
ATXN3-224ENST00000554040 PHTF2Q8N3S3 785 aa8.93□□□□□ -0.98
ATXN3-224ENST00000554040 TMEM151AQ8N4L1 468 aa8.93□□□□□ -0.98
ATXN3-224ENST00000554040 ZNF592Q92610 1267 aa8.93□□□□□ -0.98
ATXN3-224ENST00000554040 ZBED3Q96IU2 234 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-224ENST00000554040 XDHP47989 1333 aa8.93□□□□□ -0.98
ATXN3-224ENST00000554040 MYO3BQ8WXR4 1341 aa8.93□□□□□ -0.98
ATXN3-224ENST00000554040 LRRC37AA6NMS7 1700 aa8.93□□□□□ -0.98
ATXN3-224ENST00000554040 MYCP01106 439 aaPredicted RBP8.92□□□□□ -0.98
ATXN3-224ENST00000554040 HSP90B1P14625 803 aaKnown RBP8.92□□□□□ -0.98
ATXN3-224ENST00000554040 CCDC152Q4G0S7 254 aa8.92□□□□□ -0.98
ATXN3-224ENST00000554040 WDR44Q5JSH3 913 aa8.92□□□□□ -0.98
ATXN3-224ENST00000554040 ZBTB38Q8NAP3 1195 aaPredicted RBP8.92□□□□□ -0.98
ATXN3-224ENST00000554040 MBIPQ9NS73 344 aa8.92□□□□□ -0.98
ATXN3-224ENST00000554040 LAMB2P55268 1798 aa8.91□□□□□ -0.98
ATXN3-224ENST00000554040 A0A1W2PPC1 479 aa8.91□□□□□ -0.98
ATXN3-224ENST00000554040 RNF225M0QZC1 329 aaPredicted RBP8.91□□□□□ -0.98
ATXN3-224ENST00000554040 GNRH1P01148 92 aa8.91□□□□□ -0.98
ATXN3-224ENST00000554040 SUPT20HL1Q3ZLR7 823 aa8.91□□□□□ -0.98
ATXN3-224ENST00000554040 TTLL5Q6EMB2 1281 aa8.91□□□□□ -0.98
ATXN3-224ENST00000554040 ANKRD18AQ8IVF6 992 aa8.91□□□□□ -0.98
ATXN3-224ENST00000554040 SH3TC2Q8TF17 1288 aa8.91□□□□□ -0.98
ATXN3-224ENST00000554040 GTPBP3Q969Y2 492 aaKnown RBP8.91□□□□□ -0.98
ATXN3-224ENST00000554040 GAS2L1Q99501 681 aaPredicted RBP8.91□□□□□ -0.98
ATXN3-224ENST00000554040 ESYT1Q9BSJ8 1104 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms