RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 CABP5Q9NP86 173 aa11.17□□□□□ -0.62
CHD8-206ENST00000553870 PRDM10Q9NQV6 1147 aa11.17□□□□□ -0.62
CHD8-206ENST00000553870 PPP4R2Q9NY27 417 aa11.17□□□□□ -0.62
CHD8-206ENST00000553870 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.17□□□□□ -0.62
CHD8-206ENST00000553870 MYH1P12882 1939 aa11.16□□□□□ -0.62
CHD8-206ENST00000553870 CCL15-CCL14A0A0B4J2E2 113 aa11.16□□□□□ -0.62
CHD8-206ENST00000553870 FAM196BA6NMK8 535 aa11.16□□□□□ -0.62
CHD8-206ENST00000553870 FOXN1O15353 648 aa11.16□□□□□ -0.62
CHD8-206ENST00000553870 TRPA1O75762 1119 aa11.16□□□□□ -0.62
CHD8-206ENST00000553870 SLC3A2P08195 630 aaKnown RBP11.16□□□□□ -0.62
CHD8-206ENST00000553870 SLURP2P0DP57 97 aa11.16□□□□□ -0.62
CHD8-206ENST00000553870 RRP1BQ14684 758 aaKnown RBP11.16□□□□□ -0.62
CHD8-206ENST00000553870 CCL15Q16663 113 aa11.16□□□□□ -0.62
CHD8-206ENST00000553870 ZNF280CQ8ND82 737 aa11.16□□□□□ -0.62
CHD8-206ENST00000553870 DIAPH3Q9NSV4 1193 aa11.16□□□□□ -0.62
CHD8-206ENST00000553870 RNF216Q9NWF9 866 aaPredicted RBP11.16□□□□□ -0.62
CHD8-206ENST00000553870 A0A0G2JLL6 359 aaPredicted RBP11.15□□□□□ -0.62
CHD8-206ENST00000553870 C19orf81C9J6K1 198 aa11.15□□□□□ -0.62
CHD8-206ENST00000553870 SHMT1P34896 483 aa11.15□□□□□ -0.62
CHD8-206ENST00000553870 TDO2P48775 406 aa11.15□□□□□ -0.62
CHD8-206ENST00000553870 CDK8P49336 464 aa11.15□□□□□ -0.62
CHD8-206ENST00000553870 NMIQ13287 307 aaPredicted RBP11.15□□□□□ -0.62
CHD8-206ENST00000553870 ABCB5Q2M3G0 1257 aa11.15□□□□□ -0.62
CHD8-206ENST00000553870 SLC4A8Q2Y0W8 1093 aa11.15□□□□□ -0.62
CHD8-206ENST00000553870 C16orf86Q6ZW13 317 aa11.15□□□□□ -0.62
CHD8-206ENST00000553870 PRRT2Q7Z6L0 340 aaPredicted RBP11.15□□□□□ -0.62
CHD8-206ENST00000553870 ANKRD23Q86SG2 305 aa11.15□□□□□ -0.62
CHD8-206ENST00000553870 RUFY2Q8WXA3 655 aa11.15□□□□□ -0.62
CHD8-206ENST00000553870 BRI3BPQ8WY22 251 aa11.15□□□□□ -0.62
CHD8-206ENST00000553870 FAM227BQ96M60 508 aa11.15□□□□□ -0.62
CHD8-206ENST00000553870 PTPN18Q99952 460 aa11.15□□□□□ -0.62
CHD8-206ENST00000553870 NAPBQ9H115 298 aa11.15□□□□□ -0.62
CHD8-206ENST00000553870 ZBTB21Q9ULJ3 1066 aa11.15□□□□□ -0.62
CHD8-206ENST00000553870 SLC45A1Q9Y2W3 748 aa11.15□□□□□ -0.62
CHD8-206ENST00000553870 OTOFQ9HC10 1997 aa11.15□□□□□ -0.62
CHD8-206ENST00000553870 CCDC171Q6TFL3 1326 aa11.14□□□□□ -0.63
CHD8-206ENST00000553870 A0A0D9SFI3 127 aa11.14□□□□□ -0.63
CHD8-206ENST00000553870 MINDY4BA8MYZ0 360 aa11.14□□□□□ -0.63
CHD8-206ENST00000553870 IGF2BP3O00425 579 aaKnown RBP eCLIP11.14□□□□□ -0.63
CHD8-206ENST00000553870 CYP2D6P10635 497 aa11.14□□□□□ -0.63
CHD8-206ENST00000553870 HSPA8P11142 646 aaKnown RBP11.14□□□□□ -0.63
CHD8-206ENST00000553870 GSPT1P15170 499 aaKnown RBP11.14□□□□□ -0.63
CHD8-206ENST00000553870 BACE1P56817 501 aa11.14□□□□□ -0.63
CHD8-206ENST00000553870 SPP2Q13103 211 aa11.14□□□□□ -0.63
CHD8-206ENST00000553870 SH3D19Q5HYK7 790 aa11.14□□□□□ -0.63
CHD8-206ENST00000553870 PROCA1Q8NCQ7 364 aaPredicted RBP11.14□□□□□ -0.63
CHD8-206ENST00000553870 ZMYM6O95789 1325 aa11.13□□□□□ -0.63
CHD8-206ENST00000553870 CYP2D7A0A087X1C5 515 aa11.13□□□□□ -0.63
CHD8-206ENST00000553870 BTBD19C9JJ37 291 aa11.13□□□□□ -0.63
CHD8-206ENST00000553870 USP17L10C9JJH3 530 aa11.13□□□□□ -0.63
CHD8-206ENST00000553870 GH2P01242 217 aa11.13□□□□□ -0.63
CHD8-206ENST00000553870 HSPD1P10809 573 aaKnown RBP11.13□□□□□ -0.63
CHD8-206ENST00000553870 NT5C2P49902 561 aa11.13□□□□□ -0.63
CHD8-206ENST00000553870 LBX1P52954 281 aa11.13□□□□□ -0.63
CHD8-206ENST00000553870 USP14P54578 494 aa11.13□□□□□ -0.63
CHD8-206ENST00000553870 PDE4BQ07343 736 aa11.13□□□□□ -0.63
CHD8-206ENST00000553870 PPARAQ07869 468 aa11.13□□□□□ -0.63
CHD8-206ENST00000553870 BMP2KLQ5H9B9 411 aa11.13□□□□□ -0.63
CHD8-206ENST00000553870 CWC27Q6UX04 472 aaKnown RBP11.13□□□□□ -0.63
CHD8-206ENST00000553870 CCDC129Q6ZRS4 1044 aa11.13□□□□□ -0.63
CHD8-206ENST00000553870 TMEM179Q6ZVK1 233 aa11.13□□□□□ -0.63
CHD8-206ENST00000553870 ZNF444Q8N0Y2 327 aaPredicted RBP11.13□□□□□ -0.63
CHD8-206ENST00000553870 DYNLL2Q96FJ2 89 aa11.13□□□□□ -0.63
CHD8-206ENST00000553870 MKNK2Q9HBH9 465 aa11.13□□□□□ -0.63
CHD8-206ENST00000553870 ZFYVE28Q9HCC9 887 aa11.13□□□□□ -0.63
CHD8-206ENST00000553870 EPB41L4AQ9HCS5 686 aaPredicted RBP11.13□□□□□ -0.63
CHD8-206ENST00000553870 ROBO3Q96MS0 1386 aa11.13□□□□□ -0.63
CHD8-206ENST00000553870 LAMB1P07942 1786 aa11.13□□□□□ -0.63
CHD8-206ENST00000553870 RAD50Q92878 1312 aa11.12□□□□□ -0.63
CHD8-206ENST00000553870 SIPA1L1O43166 1804 aa11.12□□□□□ -0.63
CHD8-206ENST00000553870 TRIM75PA6NK02 468 aa11.12□□□□□ -0.63
CHD8-206ENST00000553870 GDF11O95390 407 aa11.12□□□□□ -0.63
CHD8-206ENST00000553870 FGAP02671 866 aa11.12□□□□□ -0.63
CHD8-206ENST00000553870 PCP11498 1178 aaKnown RBP11.12□□□□□ -0.63
CHD8-206ENST00000553870 CHMLP26374 656 aa11.12□□□□□ -0.63
CHD8-206ENST00000553870 JAG1P78504 1218 aa11.12□□□□□ -0.63
CHD8-206ENST00000553870 PABPC4Q13310 644 aaKnown RBP eCLIP11.12□□□□□ -0.63
CHD8-206ENST00000553870 MOGSQ13724 837 aa11.12□□□□□ -0.63
CHD8-206ENST00000553870 FAM43AQ8N2R8 423 aa11.12□□□□□ -0.63
CHD8-206ENST00000553870 DSCC1Q9BVC3 393 aa11.12□□□□□ -0.63
CHD8-206ENST00000553870 KANSL2Q9H9L4 492 aa11.12□□□□□ -0.63
CHD8-206ENST00000553870 TMOD4Q9NZQ9 345 aa11.12□□□□□ -0.63
CHD8-206ENST00000553870 CTNNA3Q9UI47 895 aa11.12□□□□□ -0.63
CHD8-206ENST00000553870 ANAPC4Q9UJX5 808 aa11.12□□□□□ -0.63
CHD8-206ENST00000553870 DOCK1Q14185 1865 aa11.12□□□□□ -0.63
CHD8-206ENST00000553870 NAV1Q8NEY1 1877 aa11.12□□□□□ -0.63
CHD8-206ENST00000553870 DDX60LQ5H9U9 1706 aaKnown RBP11.12□□□□□ -0.63
CHD8-206ENST00000553870 PCNTO95613 3336 aa11.11□□□□□ -0.63
CHD8-206ENST00000553870 GPR25O00155 361 aa11.11□□□□□ -0.63
CHD8-206ENST00000553870 PDHXO00330 501 aa11.11□□□□□ -0.63
CHD8-206ENST00000553870 MPHOSPH10O00566 681 aaKnown RBP11.11□□□□□ -0.63
CHD8-206ENST00000553870 FOXP2O15409 715 aa11.11□□□□□ -0.63
CHD8-206ENST00000553870 TBC1D8O95759 1140 aa11.11□□□□□ -0.63
CHD8-206ENST00000553870 FGRP09769 529 aa11.11□□□□□ -0.63
CHD8-206ENST00000553870 HOXA7P31268 230 aaPredicted RBP11.11□□□□□ -0.63
CHD8-206ENST00000553870 GUCY1A2P33402 732 aa11.11□□□□□ -0.63
CHD8-206ENST00000553870 RAB3GAP1Q15042 981 aa11.11□□□□□ -0.63
CHD8-206ENST00000553870 TAF1CQ15572 869 aaPredicted RBP11.11□□□□□ -0.63
CHD8-206ENST00000553870 PPP4R3BQ5MIZ7 849 aa11.11□□□□□ -0.63
CHD8-206ENST00000553870 VPS53Q5VIR6 699 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms