RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 ZAP70P43403 619 aa12.08□□□□□ -0.48
ACTN1-210ENST00000553779 WDR78Q5VTH9 848 aa12.08□□□□□ -0.48
ACTN1-210ENST00000553779 NECAB2Q7Z6G3 386 aa12.08□□□□□ -0.48
ACTN1-210ENST00000553779 PAGR1Q9BTK6 254 aa12.08□□□□□ -0.48
ACTN1-210ENST00000553779 HMX1Q9NP08 348 aaPredicted RBP12.08□□□□□ -0.48
ACTN1-210ENST00000553779 PALD1Q9ULE6 856 aa12.08□□□□□ -0.48
ACTN1-210ENST00000553779 ZBTB21Q9ULJ3 1066 aa12.08□□□□□ -0.48
ACTN1-210ENST00000553779 C19orf81C9J6K1 198 aa12.07□□□□□ -0.48
ACTN1-210ENST00000553779 USP17L10C9JJH3 530 aa12.07□□□□□ -0.48
ACTN1-210ENST00000553779 CYP2B6P20813 491 aa12.07□□□□□ -0.48
ACTN1-210ENST00000553779 BACE1P56817 501 aa12.07□□□□□ -0.48
ACTN1-210ENST00000553779 ATP8B2P98198 1209 aa12.07□□□□□ -0.48
ACTN1-210ENST00000553779 ZYXQ15942 572 aaKnown RBP12.07□□□□□ -0.48
ACTN1-210ENST00000553779 CERS3Q8IU89 383 aa12.07□□□□□ -0.48
ACTN1-210ENST00000553779 MIGA1Q8NAN2 632 aa12.07□□□□□ -0.48
ACTN1-210ENST00000553779 GPRC5AQ8NFJ5 357 aa12.07□□□□□ -0.48
ACTN1-210ENST00000553779 GTF3C2Q8WUA4 911 aaPredicted RBP12.07□□□□□ -0.48
ACTN1-210ENST00000553779 SOCS4Q8WXH5 440 aa12.07□□□□□ -0.48
ACTN1-210ENST00000553779 PAWRQ96IZ0 340 aaKnown RBP12.07□□□□□ -0.48
ACTN1-210ENST00000553779 NUDT12Q9BQG2 462 aa12.07□□□□□ -0.48
ACTN1-210ENST00000553779 WDR18Q9BV38 432 aa12.07□□□□□ -0.48
ACTN1-210ENST00000553779 CCDC8Q9H0W5 538 aaPredicted RBP12.07□□□□□ -0.48
ACTN1-210ENST00000553779 GINM1Q9NU53 330 aa12.07□□□□□ -0.48
ACTN1-210ENST00000553779 RBM27Q9P2N5 1060 aaKnown RBP12.07□□□□□ -0.48
ACTN1-210ENST00000553779 ZNFX1Q9P2E3 1918 aaKnown RBP12.06□□□□□ -0.48
ACTN1-210ENST00000553779 ZBTB7BO15156 539 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-210ENST00000553779 CYP2E1P05181 493 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-210ENST00000553779 ZKSCAN1P17029 563 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-210ENST00000553779 HERVK_113P62684 666 aa12.06□□□□□ -0.48
ACTN1-210ENST00000553779 DYNLL1P63167 89 aaKnown RBP12.06□□□□□ -0.48
ACTN1-210ENST00000553779 MAP3K12Q12852 859 aa12.06□□□□□ -0.48
ACTN1-210ENST00000553779 POLA2Q14181 598 aa12.06□□□□□ -0.48
ACTN1-210ENST00000553779 SH3D19Q5HYK7 790 aa12.06□□□□□ -0.48
ACTN1-210ENST00000553779 AACSQ86V21 672 aa12.06□□□□□ -0.48
ACTN1-210ENST00000553779 ERC1Q8IUD2 1116 aa12.06□□□□□ -0.48
ACTN1-210ENST00000553779 FOXP4Q8IVH2 680 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-210ENST00000553779 C7orf61Q8IZ16 206 aa12.06□□□□□ -0.48
ACTN1-210ENST00000553779 MAGEB6Q8N7X4 407 aa12.06□□□□□ -0.48
ACTN1-210ENST00000553779 SSH3Q8TE77 659 aa12.06□□□□□ -0.48
ACTN1-210ENST00000553779 PIH1D3Q9NQM4 214 aaKnown RBP12.06□□□□□ -0.48
ACTN1-210ENST00000553779 PAK6Q9NQU5 681 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-210ENST00000553779 SZT2Q5T011 3432 aa12.05□□□□□ -0.48
ACTN1-210ENST00000553779 GLRX3O76003 335 aaKnown RBP12.05□□□□□ -0.48
ACTN1-210ENST00000553779 GH2P01242 217 aa12.05□□□□□ -0.48
ACTN1-210ENST00000553779 MAPK4P31152 587 aa12.05□□□□□ -0.48
ACTN1-210ENST00000553779 PPP4CP60510 307 aa12.05□□□□□ -0.48
ACTN1-210ENST00000553779 RRP1BQ14684 758 aaKnown RBP12.05□□□□□ -0.48
ACTN1-210ENST00000553779 RAB3GAP1Q15042 981 aa12.05□□□□□ -0.48
ACTN1-210ENST00000553779 USP17L2Q6R6M4 530 aa12.05□□□□□ -0.48
ACTN1-210ENST00000553779 UBE2Q1Q7Z7E8 422 aa12.05□□□□□ -0.48
ACTN1-210ENST00000553779 ADGRA1Q86SQ6 560 aa12.05□□□□□ -0.48
ACTN1-210ENST00000553779 ANKLE1Q8NAG6 615 aa12.05□□□□□ -0.48
ACTN1-210ENST00000553779 CABP5Q9NP86 173 aa12.05□□□□□ -0.48
ACTN1-210ENST00000553779 TLR7Q9NYK1 1049 aaKnown RBP12.05□□□□□ -0.48
ACTN1-210ENST00000553779 DBNLQ9UJU6 430 aaKnown RBP12.05□□□□□ -0.48
ACTN1-210ENST00000553779 DNAH12Q6ZR08 3092 aa12.05□□□□□ -0.48
ACTN1-210ENST00000553779 RPTORQ8N122 1335 aa12.05□□□□□ -0.48
ACTN1-210ENST00000553779 APBB1O00213 710 aa12.04□□□□□ -0.48
ACTN1-210ENST00000553779 IGSF3O75054 1194 aa12.04□□□□□ -0.48
ACTN1-210ENST00000553779 POLR3DP05423 398 aaPredicted RBP12.04□□□□□ -0.48
ACTN1-210ENST00000553779 PRKAR2AP13861 404 aaKnown RBP12.04□□□□□ -0.48
ACTN1-210ENST00000553779 RGS2P41220 211 aa12.04□□□□□ -0.48
ACTN1-210ENST00000553779 USP14P54578 494 aa12.04□□□□□ -0.48
ACTN1-210ENST00000553779 CCNA1P78396 465 aa12.04□□□□□ -0.48
ACTN1-210ENST00000553779 TTC6Q86TZ1 520 aa12.04□□□□□ -0.48
ACTN1-210ENST00000553779 TRMT44Q8IYL2 757 aaKnown RBP12.04□□□□□ -0.48
ACTN1-210ENST00000553779 DIS3LQ8TF46 1054 aaKnown RBP12.04□□□□□ -0.48
ACTN1-210ENST00000553779 ZNF512BQ96KM6 892 aaPredicted RBP12.04□□□□□ -0.48
ACTN1-210ENST00000553779 P2RX7Q99572 595 aaKnown RBP12.04□□□□□ -0.48
ACTN1-210ENST00000553779 NBPF3Q9H094 633 aa12.04□□□□□ -0.48
ACTN1-210ENST00000553779 MORF4L1Q9UBU8 362 aa12.04□□□□□ -0.48
ACTN1-210ENST00000553779 SERPINB13Q9UIV8 391 aa12.04□□□□□ -0.48
ACTN1-210ENST00000553779 EXOC6BQ9Y2D4 811 aa12.04□□□□□ -0.48
ACTN1-210ENST00000553779 IVNS1ABPQ9Y6Y0 642 aa12.04□□□□□ -0.48
ACTN1-210ENST00000553779 COL11A1P12107 1806 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-210ENST00000553779 MPHOSPH10O00566 681 aaKnown RBP12.03□□□□□ -0.48
ACTN1-210ENST00000553779 HOXA7P31268 230 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-210ENST00000553779 ERVK-9P63128 1117 aa12.03□□□□□ -0.48
ACTN1-210ENST00000553779 ERVK-24P63145 666 aa12.03□□□□□ -0.48
ACTN1-210ENST00000553779 ABCB5Q2M3G0 1257 aa12.03□□□□□ -0.48
ACTN1-210ENST00000553779 SHROOM1Q2M3G4 852 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-210ENST00000553779 CERKLQ49MI3 558 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-210ENST00000553779 HSP90AB4PQ58FF6 505 aa12.03□□□□□ -0.48
ACTN1-210ENST00000553779 PLEKHH3Q7Z736 793 aa12.03□□□□□ -0.48
ACTN1-210ENST00000553779 TRIB2Q92519 343 aa12.03□□□□□ -0.48
ACTN1-210ENST00000553779 CRISPLD2Q9H0B8 497 aa12.03□□□□□ -0.48
ACTN1-210ENST00000553779 C11orf49Q9H6J7 331 aa12.03□□□□□ -0.48
ACTN1-210ENST00000553779 DNAJC18Q9H819 358 aa12.03□□□□□ -0.48
ACTN1-210ENST00000553779 ZMYND8Q9ULU4 1186 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-210ENST00000553779 NDUFB9Q9Y6M9 179 aa12.03□□□□□ -0.48
ACTN1-210ENST00000553779 PLXNA1Q9UIW2 1896 aa12.03□□□□□ -0.48
ACTN1-210ENST00000553779 CUL9Q8IWT3 2517 aa12.02□□□□□ -0.48
ACTN1-210ENST00000553779 MAGEB6P1A0A0J9YX57 407 aa12.02□□□□□ -0.49
ACTN1-210ENST00000553779 USP17L15C9J2P7 530 aa12.02□□□□□ -0.49
ACTN1-210ENST00000553779 USP17L13C9JLJ4 530 aa12.02□□□□□ -0.49
ACTN1-210ENST00000553779 USP17L11C9JVI0 530 aa12.02□□□□□ -0.49
ACTN1-210ENST00000553779 USP17L18D6R9N7 530 aa12.02□□□□□ -0.49
ACTN1-210ENST00000553779 USP17L22D6RA61 530 aa12.02□□□□□ -0.49
ACTN1-210ENST00000553779 USP17L17D6RBQ6 530 aa12.02□□□□□ -0.49
ACTN1-210ENST00000553779 USP17L19D6RCP7 530 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms