RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 CNBD1Q8NA66 436 aa17.18■□□□□ 0.34
ARHGEF40-202ENST00000553709 RGS12O14924 1447 aa17.18■□□□□ 0.34
ARHGEF40-202ENST00000553709 VWA3BQ502W6 1294 aa17.18■□□□□ 0.34
ARHGEF40-202ENST00000553709 TMTC1Q8IUR5 882 aa17.18■□□□□ 0.34
ARHGEF40-202ENST00000553709 ANKS4BQ8N8V4 417 aa17.18■□□□□ 0.34
ARHGEF40-202ENST00000553709 RBM17Q96I25 401 aaKnown RBP17.18■□□□□ 0.34
ARHGEF40-202ENST00000553709 TPCN1Q9ULQ1 816 aa17.18■□□□□ 0.34
ARHGEF40-202ENST00000553709 PPLO60437 1756 aa17.18■□□□□ 0.34
ARHGEF40-202ENST00000553709 DNAJC21Q5F1R6 531 aaKnown RBP17.17■□□□□ 0.34
ARHGEF40-202ENST00000553709 RICTORQ6R327 1708 aa17.17■□□□□ 0.34
ARHGEF40-202ENST00000553709 SELENOSQ9BQE4 189 aa17.17■□□□□ 0.34
ARHGEF40-202ENST00000553709 AATFQ9NY61 560 aaKnown RBP eCLIP17.17■□□□□ 0.34
ARHGEF40-202ENST00000553709 CPSF1Q10570 1443 aaKnown RBP17.17■□□□□ 0.34
ARHGEF40-202ENST00000553709 ZEB2O60315 1214 aa17.17■□□□□ 0.34
ARHGEF40-202ENST00000553709 UFL1O94874 794 aa17.17■□□□□ 0.34
ARHGEF40-202ENST00000553709 EPB41P11171 864 aaKnown RBP17.17■□□□□ 0.34
ARHGEF40-202ENST00000553709 PLS1Q14651 629 aa17.17■□□□□ 0.34
ARHGEF40-202ENST00000553709 NUP58Q9BVL2 599 aa17.17■□□□□ 0.34
ARHGEF40-202ENST00000553709 MTRF1LQ9UGC7 380 aaKnown RBP17.17■□□□□ 0.34
ARHGEF40-202ENST00000553709 TXKP42681 527 aa17.17■□□□□ 0.34
ARHGEF40-202ENST00000553709 ELF2Q15723 593 aa17.17■□□□□ 0.34
ARHGEF40-202ENST00000553709 TRAPPC3LQ5T215 181 aa17.17■□□□□ 0.34
ARHGEF40-202ENST00000553709 CCDC50Q8IVM0 306 aa17.17■□□□□ 0.34
ARHGEF40-202ENST00000553709 ATP6V0A2Q9Y487 856 aa17.17■□□□□ 0.34
ARHGEF40-202ENST00000553709 TTC14Q96N46 770 aa17.17■□□□□ 0.34
ARHGEF40-202ENST00000553709 AKNAD1Q5T1N1 836 aa17.16■□□□□ 0.34
ARHGEF40-202ENST00000553709 FRMD4BQ9Y2L6 1034 aa17.16■□□□□ 0.34
ARHGEF40-202ENST00000553709 NONOQ15233 471 aaKnown RBP eCLIP17.16■□□□□ 0.34
ARHGEF40-202ENST00000553709 WDR66Q8TBY9 1149 aa17.16■□□□□ 0.34
ARHGEF40-202ENST00000553709 JAKMIP2Q96AA8 810 aa17.16■□□□□ 0.34
ARHGEF40-202ENST00000553709 CCDC87Q9NVE4 849 aa17.16■□□□□ 0.34
ARHGEF40-202ENST00000553709 ADAMTS13Q76LX8 1427 aa17.16■□□□□ 0.34
ARHGEF40-202ENST00000553709 TMEM131LA2VDJ0 1609 aa17.16■□□□□ 0.34
ARHGEF40-202ENST00000553709 TCIRG1Q13488 830 aa17.16■□□□□ 0.34
ARHGEF40-202ENST00000553709 HAUS3Q68CZ6 603 aa17.16■□□□□ 0.34
ARHGEF40-202ENST00000553709 CCDC121Q6ZUS5 278 aa17.16■□□□□ 0.34
ARHGEF40-202ENST00000553709 FBF1Q8TES7 1133 aa17.16■□□□□ 0.34
ARHGEF40-202ENST00000553709 TSNARE1Q96NA8 513 aa17.16■□□□□ 0.34
ARHGEF40-202ENST00000553709 STAP2Q9UGK3 403 aa17.16■□□□□ 0.34
ARHGEF40-202ENST00000553709 PFKFB2O60825 505 aa17.16■□□□□ 0.34
ARHGEF40-202ENST00000553709 PLCB3Q01970 1234 aa17.16■□□□□ 0.34
ARHGEF40-202ENST00000553709 KRT25Q7Z3Z0 450 aa17.16■□□□□ 0.34
ARHGEF40-202ENST00000553709 KRT9P35527 623 aa17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 NBPF14Q5TI25 921 aa17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 CERS3Q8IU89 383 aa17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 XPO4Q9C0E2 1151 aaKnown RBP17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 TAB2Q9NYJ8 693 aa17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 MTUS1Q9ULD2 1270 aa17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 ZBTB21Q9ULJ3 1066 aa17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 PNPLA6Q8IY17 1366 aa17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 GPT2Q8TD30 523 aa17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 IPO4Q8TEX9 1081 aaKnown RBP17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 KIAA1468Q9P260 1216 aa17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 PARP3Q9Y6F1 533 aa17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 TLDC2A0PJX2 215 aa17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 ZNF853P0CG23 659 aa17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 MTX1Q13505 466 aa17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 TFCP2L1Q9NZI6 479 aa17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 NR1I2O75469 434 aa17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 PHKG2P15735 406 aa17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 MICALL1Q8N3F8 863 aa17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 OTUD6BQ8N6M0 293 aa17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 USP28Q96RU2 1077 aa17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 GLT8D2Q9H1C3 349 aa17.15■□□□□ 0.34
ARHGEF40-202ENST00000553709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.15■□□□□ 0.348e-7■■□□□ 14.5
ARHGEF40-202ENST00000553709 POLD1P28340 1107 aa17.14■□□□□ 0.34
ARHGEF40-202ENST00000553709 HAUS7Q99871 368 aa17.14■□□□□ 0.34
ARHGEF40-202ENST00000553709 PNOCQ13519 176 aa17.14■□□□□ 0.33
ARHGEF40-202ENST00000553709 CPLX4Q7Z7G2 160 aa17.14■□□□□ 0.33
ARHGEF40-202ENST00000553709 SMAP1Q8IYB5 467 aaPredicted RBP17.14■□□□□ 0.33
ARHGEF40-202ENST00000553709 LRWD1Q9UFC0 647 aa17.14■□□□□ 0.33
ARHGEF40-202ENST00000553709 ERVV-2B6SEH9 535 aa17.14■□□□□ 0.33
ARHGEF40-202ENST00000553709 PFKFB1P16118 471 aa17.14■□□□□ 0.33
ARHGEF40-202ENST00000553709 CALCOCO2Q13137 446 aa17.14■□□□□ 0.33
ARHGEF40-202ENST00000553709 MSL1Q68DK7 614 aa17.14■□□□□ 0.33
ARHGEF40-202ENST00000553709 CCDC26Q8TAB7 109 aa17.14■□□□□ 0.33
ARHGEF40-202ENST00000553709 SEC62Q99442 399 aaKnown RBP17.14■□□□□ 0.33
ARHGEF40-202ENST00000553709 SMIM23A6NLE4 172 aa17.14■□□□□ 0.33
ARHGEF40-202ENST00000553709 CETN3O15182 167 aa17.14■□□□□ 0.33
ARHGEF40-202ENST00000553709 EIF6P56537 245 aaKnown RBP17.14■□□□□ 0.33
ARHGEF40-202ENST00000553709 C8orf74Q6P047 294 aa17.14■□□□□ 0.33
ARHGEF40-202ENST00000553709 OSBPL3Q9H4L5 887 aa17.14■□□□□ 0.33
ARHGEF40-202ENST00000553709 VPS54Q9P1Q0 977 aa17.14■□□□□ 0.33
ARHGEF40-202ENST00000553709 PPP1R7Q15435 360 aa17.14■□□□□ 0.33
ARHGEF40-202ENST00000553709 TRMT44Q8IYL2 757 aaKnown RBP17.14■□□□□ 0.33
ARHGEF40-202ENST00000553709 SECISBP2LQ93073 1101 aaKnown RBP17.14■□□□□ 0.33
ARHGEF40-202ENST00000553709 MYCNP04198 464 aaPredicted RBP17.13■□□□□ 0.33
ARHGEF40-202ENST00000553709 HSPD1P10809 573 aaKnown RBP17.13■□□□□ 0.33
ARHGEF40-202ENST00000553709 LZTS2Q9BRK4 669 aa17.13■□□□□ 0.33
ARHGEF40-202ENST00000553709 NELFBQ8WX92 580 aa17.13■□□□□ 0.33
ARHGEF40-202ENST00000553709 LSG1Q9H089 658 aaKnown RBP17.13■□□□□ 0.33
ARHGEF40-202ENST00000553709 SERTAD1Q9UHV2 236 aa17.13■□□□□ 0.33
ARHGEF40-202ENST00000553709 SEL1L2Q5TEA6 688 aa17.13■□□□□ 0.33
ARHGEF40-202ENST00000553709 GGA1Q9UJY5 639 aa17.13■□□□□ 0.33
ARHGEF40-202ENST00000553709 CCDC25Q86WR0 208 aa17.13■□□□□ 0.33
ARHGEF40-202ENST00000553709 SNX29Q8TEQ0 813 aa17.13■□□□□ 0.33
ARHGEF40-202ENST00000553709 USP31Q70CQ4 1352 aa17.12■□□□□ 0.33
ARHGEF40-202ENST00000553709 ADCY7P51828 1080 aa17.12■□□□□ 0.33
ARHGEF40-202ENST00000553709 PPARAQ07869 468 aa17.12■□□□□ 0.33
ARHGEF40-202ENST00000553709 ZNF654Q8IZM8 581 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms