RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 PNMA3Q9UL41 463 aa15.19■□□□□ 0.02
SIX1-202ENST00000553535 PALD1Q9ULE6 856 aa15.19■□□□□ 0.02
SIX1-202ENST00000553535 TNPO2O14787 897 aaKnown RBP15.18■□□□□ 0.02
SIX1-202ENST00000553535 ADCY3O60266 1144 aa15.18■□□□□ 0.02
SIX1-202ENST00000553535 CYP7A1P22680 504 aa15.18■□□□□ 0.02
SIX1-202ENST00000553535 DYNLL1P63167 89 aaKnown RBP15.18■□□□□ 0.02
SIX1-202ENST00000553535 FAM110CQ1W6H9 321 aa15.18■□□□□ 0.02
SIX1-202ENST00000553535 PXYLP1Q8TE99 480 aa15.18■□□□□ 0.02
SIX1-202ENST00000553535 RNF208Q9H0X6 261 aa15.18■□□□□ 0.02
SIX1-202ENST00000553535 AS3MTQ9HBK9 375 aa15.18■□□□□ 0.02
SIX1-202ENST00000553535 ASNSP08243 561 aa15.17■□□□□ 0.02
SIX1-202ENST00000553535 GCLCP48506 637 aaPredicted RBP15.17■□□□□ 0.02
SIX1-202ENST00000553535 PABPC4Q13310 644 aaKnown RBP eCLIP15.17■□□□□ 0.02
SIX1-202ENST00000553535 UBE2Q1Q7Z7E8 422 aa15.17■□□□□ 0.02
SIX1-202ENST00000553535 ASCC2Q9H1I8 757 aaPredicted RBP15.17■□□□□ 0.02
SIX1-202ENST00000553535 EXOC6BQ9Y2D4 811 aa15.17■□□□□ 0.02
SIX1-202ENST00000553535 MYH1P12882 1939 aa15.16■□□□□ 0.02
SIX1-202ENST00000553535 ELNP15502 786 aa15.16■□□□□ 0.02
SIX1-202ENST00000553535 BACE1P56817 501 aa15.16■□□□□ 0.02
SIX1-202ENST00000553535 ERC1Q8IUD2 1116 aa15.16■□□□□ 0.02
SIX1-202ENST00000553535 UNC93B1Q9H1C4 597 aa15.16■□□□□ 0.02
SIX1-202ENST00000553535 ANTXR1Q9H6X2 564 aa15.16■□□□□ 0.02
SIX1-202ENST00000553535 GINM1Q9NU53 330 aa15.16■□□□□ 0.02
SIX1-202ENST00000553535 NDUFB9Q9Y6M9 179 aa15.16■□□□□ 0.02
SIX1-202ENST00000553535 IDH1O75874 414 aaKnown RBP15.15■□□□□ 0.02
SIX1-202ENST00000553535 SHROOM1Q2M3G4 852 aaPredicted RBP15.15■□□□□ 0.02
SIX1-202ENST00000553535 CRACR2BQ8N4Y2 399 aaPredicted RBP15.15■□□□□ 0.02
SIX1-202ENST00000553535 COA7Q96BR5 231 aa15.15■□□□□ 0.02
SIX1-202ENST00000553535 SAP30BPQ9UHR5 308 aaKnown RBP15.15■□□□□ 0.02
SIX1-202ENST00000553535 C19orf81C9J6K1 198 aa15.15■□□□□ 0.02
SIX1-202ENST00000553535 SGPL1O95470 568 aa15.15■□□□□ 0.02
SIX1-202ENST00000553535 INHAP05111 366 aa15.15■□□□□ 0.02
SIX1-202ENST00000553535 HOXA7P31268 230 aaPredicted RBP15.15■□□□□ 0.02
SIX1-202ENST00000553535 MTMR2Q13614 643 aa15.15■□□□□ 0.02
SIX1-202ENST00000553535 TMED8Q6PL24 325 aaPredicted RBP15.15■□□□□ 0.02
SIX1-202ENST00000553535 AACSQ86V21 672 aa15.15■□□□□ 0.02
SIX1-202ENST00000553535 CERS3Q8IU89 383 aa15.15■□□□□ 0.02
SIX1-202ENST00000553535 MAGEB6Q8N7X4 407 aa15.15■□□□□ 0.02
SIX1-202ENST00000553535 MIGA1Q8NAN2 632 aa15.15■□□□□ 0.02
SIX1-202ENST00000553535 U2AF1L4Q8WU68 220 aaKnown RBP15.15■□□□□ 0.02
SIX1-202ENST00000553535 GJD2Q9UKL4 321 aa15.15■□□□□ 0.02
SIX1-202ENST00000553535 TRIOBPQ9H2D6 2365 aa15.15■□□□□ 0.02
SIX1-202ENST00000553535 H0YGN5 161 aa15.14■□□□□ 0.01
SIX1-202ENST00000553535 GDF11O95390 407 aa15.14■□□□□ 0.01
SIX1-202ENST00000553535 HLA-DOAP06340 250 aa15.14■□□□□ 0.01
SIX1-202ENST00000553535 MAP3K12Q12852 859 aa15.14■□□□□ 0.01
SIX1-202ENST00000553535 HSP90AB4PQ58FF6 505 aa15.14■□□□□ 0.01
SIX1-202ENST00000553535 RHPN1Q8TCX5 695 aa15.14■□□□□ 0.01
SIX1-202ENST00000553535 P2RX7Q99572 595 aaKnown RBP15.14■□□□□ 0.01
SIX1-202ENST00000553535 TRIM34Q9BYJ4 488 aa15.14■□□□□ 0.01
SIX1-202ENST00000553535 MORF4L1Q9UBU8 362 aa15.14■□□□□ 0.01
SIX1-202ENST00000553535 ZBTB21Q9ULJ3 1066 aa15.14■□□□□ 0.01
SIX1-202ENST00000553535 USP17L10C9JJH3 530 aa15.13■□□□□ 0.01
SIX1-202ENST00000553535 MS4A1P11836 297 aa15.13■□□□□ 0.01
SIX1-202ENST00000553535 TATDN1Q6P1N9 297 aa15.13■□□□□ 0.01
SIX1-202ENST00000553535 IL1RAPL2Q9NP60 686 aa15.13■□□□□ 0.01
SIX1-202ENST00000553535 TMOD4Q9NZQ9 345 aa15.13■□□□□ 0.01
SIX1-202ENST00000553535 COLQQ9Y215 455 aaPredicted RBP15.13■□□□□ 0.01
SIX1-202ENST00000553535 CAPN2P17655 700 aa15.12■□□□□ 0.01
SIX1-202ENST00000553535 USP5P45974 858 aa15.12■□□□□ 0.01
SIX1-202ENST00000553535 RPAP2Q8IXW5 612 aaPredicted RBP15.12■□□□□ 0.01
SIX1-202ENST00000553535 PAK6Q9NQU5 681 aaPredicted RBP15.12■□□□□ 0.01
SIX1-202ENST00000553535 IRX3P78415 501 aaPredicted RBP15.11■□□□□ 0.01
SIX1-202ENST00000553535 SIRT2Q8IXJ6 389 aa15.11■□□□□ 0.01
SIX1-202ENST00000553535 DPF3Q92784 378 aa15.11■□□□□ 0.01
SIX1-202ENST00000553535 RIOK1Q9BRS2 568 aaKnown RBP15.11■□□□□ 0.01
SIX1-202ENST00000553535 EHD4Q9H223 541 aa15.11■□□□□ 0.01
SIX1-202ENST00000553535 EMILIN3Q9NT22 766 aa15.11■□□□□ 0.01
SIX1-202ENST00000553535 ZBTB40Q9NUA8 1239 aa15.11■□□□□ 0.01
SIX1-202ENST00000553535 TAOK2Q9UL54 1235 aa15.11■□□□□ 0.01
SIX1-202ENST00000553535 PLXNB2O15031 1838 aa15.11■□□□□ 0.01
SIX1-202ENST00000553535 RANBP2P49792 3224 aaKnown RBP15.11■□□□□ 0.01
SIX1-202ENST00000553535 GH2P01242 217 aa15.11■□□□□ 0.01
SIX1-202ENST00000553535 HERVK_113P62684 666 aa15.11■□□□□ 0.01
SIX1-202ENST00000553535 DEFB118Q96PH6 123 aa15.11■□□□□ 0.01
SIX1-202ENST00000553535 CRISPLD2Q9H0B8 497 aa15.11■□□□□ 0.01
SIX1-202ENST00000553535 TXNRD2Q9NNW7 524 aa15.11■□□□□ 0.01
SIX1-202ENST00000553535 RBPJLQ9UBG7 517 aa15.11■□□□□ 0.01
SIX1-202ENST00000553535 SERPINB13Q9UIV8 391 aa15.11■□□□□ 0.01
SIX1-202ENST00000553535 SSUH2Q9Y2M2 353 aa15.11■□□□□ 0.01
SIX1-202ENST00000553535 PEX10O60683 326 aa15.1■□□□□ 0.01
SIX1-202ENST00000553535 FARP2O94887 1054 aaPredicted RBP15.1■□□□□ 0.01
SIX1-202ENST00000553535 TFRCP02786 760 aaKnown RBP15.1■□□□□ 0.01
SIX1-202ENST00000553535 TTF1Q15361 905 aaPredicted RBP15.1■□□□□ 0.01
SIX1-202ENST00000553535 USP17L2Q6R6M4 530 aa15.1■□□□□ 0.01
SIX1-202ENST00000553535 POTEEQ6S8J3 1075 aa15.1■□□□□ 0.01
SIX1-202ENST00000553535 TTC6Q86TZ1 520 aa15.1■□□□□ 0.01
SIX1-202ENST00000553535 CLASRPQ8N2M8 674 aaKnown RBP15.1■□□□□ 0.01
SIX1-202ENST00000553535 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.1■□□□□ 0.01
SIX1-202ENST00000553535 KIF1BPQ96EK5 621 aa15.1■□□□□ 0.01
SIX1-202ENST00000553535 HTATIP2Q9BUP3 242 aa15.1■□□□□ 0.01
SIX1-202ENST00000553535 DDX19BQ9UMR2 479 aa15.1■□□□□ 0.01
SIX1-202ENST00000553535 COG6Q9Y2V7 657 aa15.1■□□□□ 0.01
SIX1-202ENST00000553535 FXR1P51114 621 aaKnown RBP eCLIP15.09■□□□□ 0.01
SIX1-202ENST00000553535 PLCD1P51178 756 aa15.09■□□□□ 0.01
SIX1-202ENST00000553535 Q3C1V9 767 aa15.09■□□□□ 0.01
SIX1-202ENST00000553535 GPRC5AQ8NFJ5 357 aa15.09■□□□□ 0.01
SIX1-202ENST00000553535 MAGEB6P1A0A0J9YX57 407 aa15.08■□□□□ 0
SIX1-202ENST00000553535 HMMRO75330 724 aa15.08■□□□□ 0
SIX1-202ENST00000553535 HMGCRP04035 888 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms