RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 ITIH2P19823 946 aa10.17□□□□□ -0.78
CHPT1-209ENST00000552329 HDLBPQ00341 1268 aaKnown RBP10.17□□□□□ -0.78
CHPT1-209ENST00000552329 ARHGAP27Q6ZUM4 889 aa10.17□□□□□ -0.78
CHPT1-209ENST00000552329 TMEM87BQ96K49 555 aa10.17□□□□□ -0.78
CHPT1-209ENST00000552329 METTL5Q9NRN9 209 aaKnown RBP10.17□□□□□ -0.78
CHPT1-209ENST00000552329 ZC3H7BQ9UGR2 993 aaKnown RBP10.17□□□□□ -0.78
CHPT1-209ENST00000552329 GREM1O60565 184 aa10.16□□□□□ -0.78
CHPT1-209ENST00000552329 SLITRK5O94991 958 aa10.16□□□□□ -0.78
CHPT1-209ENST00000552329 RACK1P63244 317 aaKnown RBP10.16□□□□□ -0.78
CHPT1-209ENST00000552329 APOBRQ0VD83 1088 aa10.16□□□□□ -0.78
CHPT1-209ENST00000552329 MPP2Q14168 576 aa10.16□□□□□ -0.78
CHPT1-209ENST00000552329 CWF19L2Q2TBE0 894 aaKnown RBP10.16□□□□□ -0.78
CHPT1-209ENST00000552329 KIAA0825Q8IV33 1275 aa10.16□□□□□ -0.78
CHPT1-209ENST00000552329 HEXIM2Q96MH2 286 aaKnown RBP10.16□□□□□ -0.78
CHPT1-209ENST00000552329 REV1Q9UBZ9 1251 aa10.16□□□□□ -0.78
CHPT1-209ENST00000552329 CNTNAP4Q9C0A0 1308 aa10.15□□□□□ -0.78
CHPT1-209ENST00000552329 ADAMTS4O75173 837 aa10.15□□□□□ -0.78
CHPT1-209ENST00000552329 HTR3BO95264 441 aa10.15□□□□□ -0.78
CHPT1-209ENST00000552329 MCM4P33991 863 aa10.15□□□□□ -0.78
CHPT1-209ENST00000552329 INTS5Q6P9B9 1019 aaKnown RBP10.15□□□□□ -0.78
CHPT1-209ENST00000552329 PLD6Q8N2A8 252 aaKnown RBP10.15□□□□□ -0.78
CHPT1-209ENST00000552329 EAF1Q96JC9 268 aaPredicted RBP10.15□□□□□ -0.78
CHPT1-209ENST00000552329 TPX2Q9ULW0 747 aaKnown RBP10.15□□□□□ -0.78
CHPT1-209ENST00000552329 CST3P01034 146 aaPredicted RBP10.14□□□□□ -0.79
CHPT1-209ENST00000552329 GK5Q6ZS86 529 aa10.14□□□□□ -0.79
CHPT1-209ENST00000552329 METTL16Q86W50 562 aaKnown RBP10.14□□□□□ -0.79
CHPT1-209ENST00000552329 NT5DC4Q86YG4 428 aa10.14□□□□□ -0.79
CHPT1-209ENST00000552329 FAM13CQ8NE31 585 aa10.14□□□□□ -0.79
CHPT1-209ENST00000552329 PCDHB14Q9Y5E9 798 aa10.14□□□□□ -0.79
CHPT1-209ENST00000552329 TACC3Q9Y6A5 838 aa10.14□□□□□ -0.79
CHPT1-209ENST00000552329 EOMESO95936 686 aa10.13□□□□□ -0.79
CHPT1-209ENST00000552329 CPSF6Q16630 551 aaKnown RBP eCLIP10.13□□□□□ -0.79
CHPT1-209ENST00000552329 LETMD1Q6P1Q0 360 aa10.13□□□□□ -0.79
CHPT1-209ENST00000552329 CDH24Q86UP0 819 aa10.13□□□□□ -0.79
CHPT1-209ENST00000552329 MCATQ8IVS2 390 aaKnown RBP10.13□□□□□ -0.79
CHPT1-209ENST00000552329 KCNQ5Q9NR82 932 aa10.13□□□□□ -0.79
CHPT1-209ENST00000552329 DDX41Q9UJV9 622 aaKnown RBP10.13□□□□□ -0.79
CHPT1-209ENST00000552329 CHURC1-FNTBB4DL54 471 aa10.12□□□□□ -0.79
CHPT1-209ENST00000552329 DNAJA2O60884 412 aa10.12□□□□□ -0.79
CHPT1-209ENST00000552329 MSMPQ1L6U9 139 aa10.12□□□□□ -0.79
CHPT1-209ENST00000552329 MRPL41Q8IXM3 137 aaKnown RBP10.12□□□□□ -0.79
CHPT1-209ENST00000552329 NKD1Q969G9 470 aa10.12□□□□□ -0.79
CHPT1-209ENST00000552329 SLC6A19Q695T7 634 aa10.11□□□□□ -0.79
CHPT1-209ENST00000552329 MFSD2AQ8NA29 543 aa10.11□□□□□ -0.79
CHPT1-209ENST00000552329 PRDM5Q9NQX1 630 aaPredicted RBP10.11□□□□□ -0.79
CHPT1-209ENST00000552329 ADAM30Q9UKF2 790 aa10.11□□□□□ -0.79
CHPT1-209ENST00000552329 KIAA1324LA8MWY0 1029 aaPredicted RBP10.1□□□□□ -0.79
CHPT1-209ENST00000552329 PRR33A8MZF0 331 aa10.1□□□□□ -0.79
CHPT1-209ENST00000552329 SPINK2P20155 84 aa10.1□□□□□ -0.79
CHPT1-209ENST00000552329 CAP2P40123 477 aa10.1□□□□□ -0.79
CHPT1-209ENST00000552329 OXCT1P55809 520 aa10.1□□□□□ -0.79
CHPT1-209ENST00000552329 CLCQ05315 142 aa10.1□□□□□ -0.79
CHPT1-209ENST00000552329 FAM214BQ7L5A3 538 aa10.1□□□□□ -0.79
CHPT1-209ENST00000552329 NBPF11Q86T75 865 aa10.1□□□□□ -0.79
CHPT1-209ENST00000552329 DTX1Q86Y01 620 aa10.1□□□□□ -0.79
CHPT1-209ENST00000552329 GTF2IRD1Q9UHL9 959 aa10.1□□□□□ -0.79
CHPT1-209ENST00000552329 RB1CC1Q8TDY2 1594 aa10.09□□□□□ -0.79
CHPT1-209ENST00000552329 CBX7O95931 251 aa10.09□□□□□ -0.79
CHPT1-209ENST00000552329 CD96P40200 585 aa10.09□□□□□ -0.79
CHPT1-209ENST00000552329 ZNF654Q8IZM8 581 aa10.09□□□□□ -0.79
CHPT1-209ENST00000552329 LRRC3Q9BY71 257 aa10.09□□□□□ -0.79
CHPT1-209ENST00000552329 ANTXR1Q9H6X2 564 aa10.09□□□□□ -0.79
CHPT1-209ENST00000552329 ROBO2Q9HCK4 1378 aa10.09□□□□□ -0.79
CHPT1-209ENST00000552329 BNIP3Q12983 259 aa10.08□□□□□ -0.8
CHPT1-209ENST00000552329 PAK2Q13177 524 aa10.08□□□□□ -0.8
CHPT1-209ENST00000552329 TMEM201Q5SNT2 666 aa10.08□□□□□ -0.8
CHPT1-209ENST00000552329 NT5C1AQ9BXI3 368 aa10.08□□□□□ -0.8
CHPT1-209ENST00000552329 ANGEL1Q9UNK9 670 aaKnown RBP10.08□□□□□ -0.8
CHPT1-209ENST00000552329 PLAGL2Q9UPG8 496 aa10.08□□□□□ -0.8
CHPT1-209ENST00000552329 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.08□□□□□ -0.8
CHPT1-209ENST00000552329 PRR36Q9H6K5 1346 aa10.07□□□□□ -0.8
CHPT1-209ENST00000552329 GNAT3A8MTJ3 354 aa10.07□□□□□ -0.8
CHPT1-209ENST00000552329 CEACAM5P06731 702 aa10.07□□□□□ -0.8
CHPT1-209ENST00000552329 TNNI2P48788 182 aa10.07□□□□□ -0.8
CHPT1-209ENST00000552329 YARSP54577 528 aaKnown RBP10.07□□□□□ -0.8
CHPT1-209ENST00000552329 PHACTR4Q8IZ21 702 aa10.07□□□□□ -0.8
CHPT1-209ENST00000552329 NETO1Q8TDF5 533 aa10.07□□□□□ -0.8
CHPT1-209ENST00000552329 ACBD3Q9H3P7 528 aa10.07□□□□□ -0.8
CHPT1-209ENST00000552329 BSDC1Q9NW68 430 aaPredicted RBP10.07□□□□□ -0.8
CHPT1-209ENST00000552329 CCDC39Q9UFE4 941 aa10.07□□□□□ -0.8
CHPT1-209ENST00000552329 ARSHQ5FYA8 562 aa10.06□□□□□ -0.8
CHPT1-209ENST00000552329 SFRP5Q5T4F7 317 aa10.06□□□□□ -0.8
CHPT1-209ENST00000552329 FBXW10Q5XX13 1052 aa10.06□□□□□ -0.8
CHPT1-209ENST00000552329 ZNF574Q6ZN55 896 aaPredicted RBP10.06□□□□□ -0.8
CHPT1-209ENST00000552329 BAHD1Q8TBE0 780 aaPredicted RBP10.06□□□□□ -0.8
CHPT1-209ENST00000552329 KIF2CQ99661 725 aa10.06□□□□□ -0.8
CHPT1-209ENST00000552329 FAM155AB1AL88 458 aaPredicted RBP10.05□□□□□ -0.8
CHPT1-209ENST00000552329 POLR2BP30876 1174 aaKnown RBP10.05□□□□□ -0.8
CHPT1-209ENST00000552329 CDKAL1Q5VV42 579 aa10.05□□□□□ -0.8
CHPT1-209ENST00000552329 NACADO15069 1562 aa10.05□□□□□ -0.8
CHPT1-209ENST00000552329 FAM86C2PA6NEL3 165 aa10.04□□□□□ -0.8
CHPT1-209ENST00000552329 SLC22A31A6NKX4 558 aa10.04□□□□□ -0.8
CHPT1-209ENST00000552329 WNT11O96014 354 aa10.04□□□□□ -0.8
CHPT1-209ENST00000552329 ZNF165P49910 485 aa10.04□□□□□ -0.8
CHPT1-209ENST00000552329 IFI16Q16666 785 aaKnown RBP10.04□□□□□ -0.8
CHPT1-209ENST00000552329 XP32Q5T750 250 aa10.04□□□□□ -0.8
CHPT1-209ENST00000552329 OVOS1Q6IE37 1185 aa10.04□□□□□ -0.8
CHPT1-209ENST00000552329 SLITRK4Q8IW52 837 aa10.04□□□□□ -0.8
CHPT1-209ENST00000552329 FLCNQ8NFG4 579 aa10.04□□□□□ -0.8
CHPT1-209ENST00000552329 DNAJB8Q8NHS0 232 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms